RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W JNM1P36224 373 aa2.99□□□□□ -1.93
LOC1YFR001W MIX23P38162 196 aa2.99□□□□□ -1.93
LOC1YFR001W SDS24P38314 527 aa2.99□□□□□ -1.93
LOC1YFR001W MST28P39552 234 aa2.99□□□□□ -1.93
LOC1YFR001W SAS2P40963 338 aa2.99□□□□□ -1.93
LOC1YFR001W OST1P41543 476 aaKnown RBP2.99□□□□□ -1.93
LOC1YFR001W FMS1P50264 508 aa2.99□□□□□ -1.93
LOC1YFR001W YIF1P53845 314 aaKnown RBP2.99□□□□□ -1.93
LOC1YFR001W IBD2P53892 351 aa2.99□□□□□ -1.93
LOC1YFR001W MRP51Q02950 344 aa2.99□□□□□ -1.93
LOC1YFR001W ESA1Q08649 445 aa2.99□□□□□ -1.93
LOC1YFR001W MUM3Q08750 479 aa2.99□□□□□ -1.93
LOC1YFR001W RRP12Q12754 1228 aaKnown RBP2.99□□□□□ -1.93
LOC1YFR001W CLC1P17891 233 aa2.98□□□□□ -1.93
LOC1YFR001W CPR4P25334 318 aa2.98□□□□□ -1.93
LOC1YFR001W TIP1P27654 210 aaPredicted RBP2.98□□□□□ -1.93
LOC1YFR001W NAM9P27929 486 aa2.98□□□□□ -1.93
LOC1YFR001W DEG1P31115 442 aaKnown RBP2.98□□□□□ -1.93
LOC1YFR001W APE2P32454 952 aaKnown RBP2.98□□□□□ -1.93
LOC1YFR001W YBL059WP34224 193 aa2.98□□□□□ -1.93
LOC1YFR001W NDT80P38830 627 aa2.98□□□□□ -1.93
LOC1YFR001W ECM27P47144 725 aa2.98□□□□□ -1.93
LOC1YFR001W ELP3Q02908 557 aaKnown RBP2.98□□□□□ -1.93
LOC1YFR001W YMR155WQ03795 547 aa2.98□□□□□ -1.93
LOC1YFR001W PBA1Q05778 276 aa2.98□□□□□ -1.93
LOC1YFR001W YPR022CQ12139 1133 aa2.98□□□□□ -1.93
LOC1YFR001W HIS4P00815 799 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W RPI1P23250 407 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W SNT1P25357 1226 aa2.97□□□□□ -1.93
LOC1YFR001W ITR1P30605 584 aa2.97□□□□□ -1.93
LOC1YFR001W PAD1P33751 242 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
LOC1YFR001W SWH1P35845 1188 aa2.97□□□□□ -1.93
LOC1YFR001W ARA1P38115 344 aa2.97□□□□□ -1.93
LOC1YFR001W RIB5P38145 238 aa2.97□□□□□ -1.93
LOC1YFR001W RFC3P38629 340 aa2.97□□□□□ -1.93
LOC1YFR001W LSM5P40089 93 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W GPD2P41911 440 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W YJR011CP47086 261 aaPredicted RBP2.97□□□□□ -1.93
LOC1YFR001W SSN8P47821 323 aa2.97□□□□□ -1.93
LOC1YFR001W YGR250CP53316 781 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W ARX1Q03862 593 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W TIM18Q08749 192 aa2.97□□□□□ -1.93
LOC1YFR001W RRG1Q12167 365 aaPredicted RBP2.97□□□□□ -1.93
LOC1YFR001W PKH2Q12236 1081 aaKnown RBP2.97□□□□□ -1.93
LOC1YFR001W YLR108CQ12259 485 aa2.97□□□□□ -1.93
LOC1YFR001W RAD61Q99359 647 aa2.97□□□□□ -1.93
LOC1YFR001W HHF1P02309 103 aaKnown RBP2.96□□□□□ -1.94
LOC1YFR001W REV1P12689 985 aa2.96□□□□□ -1.94
LOC1YFR001W FUR1P18562 216 aaKnown RBP2.96□□□□□ -1.94
LOC1YFR001W SPS22P25380 463 aa2.96□□□□□ -1.94
LOC1YFR001W SIN4P32259 974 aa2.96□□□□□ -1.94
LOC1YFR001W NFU1P32860 256 aa2.96□□□□□ -1.94
LOC1YFR001W SDH3P33421 198 aa2.96□□□□□ -1.94
LOC1YFR001W YHR054CP38780 354 aa2.96□□□□□ -1.94
LOC1YFR001W LYS1P38998 373 aaRIP-Chip data2.96□□□□□ -1.94not detected
LOC1YFR001W LAM5P43560 674 aa2.96□□□□□ -1.94
LOC1YFR001W RPS0BP46654 252 aaKnown RBP2.96□□□□□ -1.94
LOC1YFR001W COS5P47187 383 aa2.96□□□□□ -1.94
LOC1YFR001W FRE4P53746 719 aa2.96□□□□□ -1.94
LOC1YFR001W TOF1P53840 1238 aa2.96□□□□□ -1.94
LOC1YFR001W HEL2Q05580 639 aaKnown RBP2.96□□□□□ -1.94
LOC1YFR001W RRP45Q05636 305 aaKnown RBP2.96□□□□□ -1.94
LOC1YFR001W MDM30Q05930 598 aa2.96□□□□□ -1.94
LOC1YFR001W COS7Q07788 383 aa2.96□□□□□ -1.94
LOC1YFR001W TMS1Q12116 473 aa2.96□□□□□ -1.94
LOC1YFR001W GEX1P25596 615 aa2.95□□□□□ -1.94
LOC1YFR001W KRE2P27809 442 aa2.95□□□□□ -1.94
LOC1YFR001W YME2P32843 850 aa2.95□□□□□ -1.94
LOC1YFR001W STB6P36085 766 aa2.95□□□□□ -1.94
LOC1YFR001W NTC20P38302 140 aaPredicted RBP2.95□□□□□ -1.94
LOC1YFR001W FAA2P39518 744 aa2.95□□□□□ -1.94
LOC1YFR001W REE1P40893 198 aa2.95□□□□□ -1.94
LOC1YFR001W YGR210CP42942 411 aa2.95□□□□□ -1.94
LOC1YFR001W WWM1P43582 211 aaKnown RBP2.95□□□□□ -1.94
LOC1YFR001W BTN2P53286 410 aa2.95□□□□□ -1.94
LOC1YFR001W YNR048WP53740 393 aa2.95□□□□□ -1.94
LOC1YFR001W HXT11P54862 567 aa2.95□□□□□ -1.94
LOC1YFR001W SMA2Q04658 369 aa2.95□□□□□ -1.94
LOC1YFR001W MRPL35Q06678 367 aa2.95□□□□□ -1.94
LOC1YFR001W TSR1Q07381 788 aaKnown RBP2.95□□□□□ -1.94
LOC1YFR001W VAM3Q12241 283 aa2.95□□□□□ -1.94
LOC1YFR001W HSP42Q12329 375 aa2.95□□□□□ -1.94
LOC1YFR001W ORT1Q12375 292 aa2.95□□□□□ -1.94
LOC1YFR001W ISN1Q99312 450 aa2.95□□□□□ -1.94
LOC1YFR001W YRF1-4O13559 1382 aa2.95□□□□□ -1.94
LOC1YFR001W NOP1P15646 327 aaKnown RBP2.94□□□□□ -1.94
LOC1YFR001W RHB1P25378 209 aa2.94□□□□□ -1.94
LOC1YFR001W ARO2P28777 376 aaKnown RBP2.94□□□□□ -1.94
LOC1YFR001W BYE1P36106 594 aa2.94□□□□□ -1.94
LOC1YFR001W YGL138CP53122 345 aa2.94□□□□□ -1.94
LOC1YFR001W YMR181CQ03231 154 aa2.94□□□□□ -1.94
LOC1YFR001W RKM1Q08961 583 aaPredicted RBP2.94□□□□□ -1.94
LOC1YFR001W TEF1P02994 458 aaKnown RBP2.93□□□□□ -1.94
LOC1YFR001W ARG4P04076 463 aaPredicted RBP2.93□□□□□ -1.94
LOC1YFR001W REC107P21651 314 aa2.93□□□□□ -1.94
LOC1YFR001W SLY1P22213 666 aa2.93□□□□□ -1.94
LOC1YFR001W YCR051WP25631 222 aa2.93□□□□□ -1.94
LOC1YFR001W BEM1P29366 551 aa2.93□□□□□ -1.94
LOC1YFR001W HIR2P32480 875 aa2.93□□□□□ -1.94
LOC1YFR001W PIM1P36775 1133 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms