RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W DUO1P53168 247 aaKnown RBP2.54□□□□□ -2
SHE9YDR393W CAF130P53280 1122 aaPredicted RBP2.54□□□□□ -2
SHE9YDR393W PLP2Q12017 286 aa2.54□□□□□ -2
SHE9YDR393W PWP2P25635 923 aaKnown RBP2.53□□□□□ -2
SHE9YDR393W WBP1P33767 430 aaKnown RBP2.53□□□□□ -2
SHE9YDR393W MIG3P39943 394 aa2.53□□□□□ -2
SHE9YDR393W NMD4Q12129 218 aa2.53□□□□□ -2
SHE9YDR393W PRM7Q12459 698 aa2.53□□□□□ -2
SHE9YDR393W PEP3P27801 918 aa2.52□□□□□ -2.01
SHE9YDR393W MUD1P32605 298 aaKnown RBP2.52□□□□□ -2.01
SHE9YDR393W VPS24P36095 224 aaKnown RBP2.52□□□□□ -2.01
SHE9YDR393W REG2P38232 338 aa2.52□□□□□ -2.01
SHE9YDR393W DFG10P40526 253 aa2.52□□□□□ -2.01
SHE9YDR393W YML131WQ03102 365 aa2.52□□□□□ -2.01
SHE9YDR393W RPL31BP0C2H9 113 aaKnown RBP2.51□□□□□ -2.01
SHE9YDR393W FLC2P39719 783 aa2.51□□□□□ -2.01
SHE9YDR393W PSK1P31374 1356 aa2.51□□□□□ -2.01
SHE9YDR393W ARA1P38115 344 aa2.5□□□□□ -2.01
SHE9YDR393W TIM17P39515 158 aa2.5□□□□□ -2.01
SHE9YDR393W YER186CP40101 306 aa2.5□□□□□ -2.01
SHE9YDR393W RTS3P53289 263 aa2.5□□□□□ -2.01
SHE9YDR393W IZH2Q12442 317 aa2.5□□□□□ -2.01
SHE9YDR393W AVL9Q12500 764 aa2.5□□□□□ -2.01
SHE9YDR393W YDL007C-AQ2V2Q0 85 aa2.5□□□□□ -2.01
SHE9YDR393W GAL80P04387 435 aa2.49□□□□□ -2.01
SHE9YDR393W CDC16P09798 840 aa2.49□□□□□ -2.01
SHE9YDR393W SPT10P35208 640 aa2.49□□□□□ -2.01
SHE9YDR393W YGL108CP53139 140 aa2.49□□□□□ -2.01
SHE9YDR393W NCS2P53923 493 aaPredicted RBP2.49□□□□□ -2.01
SHE9YDR393W HUA2Q12134 243 aa2.49□□□□□ -2.01
SHE9YDR393W YJR112W-AQ3E743 109 aa2.49□□□□□ -2.01
SHE9YDR393W ECM5Q03214 1411 aa2.49□□□□□ -2.01
SHE9YDR393W ATP10P18496 279 aa2.49□□□□□ -2.01
SHE9YDR393W SNT1P25357 1226 aa2.49□□□□□ -2.01
SHE9YDR393W ECM25P32525 599 aa2.49□□□□□ -2.01
SHE9YDR393W THI2P38141 450 aa2.49□□□□□ -2.01
SHE9YDR393W YNR048WP53740 393 aa2.49□□□□□ -2.01
SHE9YDR393W KTR5P53966 522 aaPredicted RBP2.49□□□□□ -2.01
SHE9YDR393W AIM32Q04689 311 aa2.49□□□□□ -2.01
SHE9YDR393W DPB3P27344 201 aa2.48□□□□□ -2.01
SHE9YDR393W IOC4Q04213 475 aa2.48□□□□□ -2.01
SHE9YDR393W TOP1P04786 769 aa2.47□□□□□ -2.01
SHE9YDR393W FUI1P38196 639 aa2.47□□□□□ -2.01
SHE9YDR393W FRE4P53746 719 aa2.47□□□□□ -2.01
SHE9YDR393W YMR018WQ04364 514 aa2.47□□□□□ -2.01
SHE9YDR393W YRM1Q12340 786 aa2.47□□□□□ -2.01
SHE9YDR393W TEF1P02994 458 aaKnown RBP2.46□□□□□ -2.02
SHE9YDR393W TRX2P22803 104 aaKnown RBP2.46□□□□□ -2.02
SHE9YDR393W RML2P32611 393 aa2.46□□□□□ -2.02
SHE9YDR393W CCT2P39076 527 aaKnown RBP2.46□□□□□ -2.02
SHE9YDR393W YGR066CP53242 292 aa2.46□□□□□ -2.02
SHE9YDR393W MRPS16Q02608 121 aa2.46□□□□□ -2.02
SHE9YDR393W DNL4Q08387 944 aaPredicted RBP2.46□□□□□ -2.02
SHE9YDR393W RTP1Q12751 981 aa2.46□□□□□ -2.02
SHE9YDR393W SMY1P32364 656 aaKnown RBP2.45□□□□□ -2.02
SHE9YDR393W HIR2P32480 875 aa2.45□□□□□ -2.02
SHE9YDR393W GYP6P32806 458 aa2.45□□□□□ -2.02
SHE9YDR393W MRE11P32829 692 aa2.45□□□□□ -2.02
SHE9YDR393W RTC2P38279 296 aa2.45□□□□□ -2.02
SHE9YDR393W MDE1P47095 244 aa2.45□□□□□ -2.02
SHE9YDR393W FLC3P53121 802 aa2.45□□□□□ -2.02
SHE9YDR393W YGR018CP53211 109 aa2.45□□□□□ -2.02
SHE9YDR393W MKC7P53379 596 aa2.45□□□□□ -2.02
SHE9YDR393W DSL1P53847 754 aa2.45□□□□□ -2.02
SHE9YDR393W YDR387CQ04162 555 aa2.45□□□□□ -2.02
SHE9YDR393W PET130P47065 347 aa2.44□□□□□ -2.02
SHE9YDR393W ECM27P47144 725 aa2.44□□□□□ -2.02
SHE9YDR393W MEP3P53390 489 aa2.44□□□□□ -2.02
SHE9YDR393W ARE2P53629 642 aaKnown RBP2.44□□□□□ -2.02
SHE9YDR393W TAP42Q04372 366 aa2.44□□□□□ -2.02
SHE9YDR393W OPY2Q06810 360 aa2.44□□□□□ -2.02
SHE9YDR393W ARG4P04076 463 aaPredicted RBP2.43□□□□□ -2.02
SHE9YDR393W SSH4P32343 579 aa2.43□□□□□ -2.02
SHE9YDR393W IES6P32617 166 aa2.43□□□□□ -2.02
SHE9YDR393W TFG2P41896 400 aaPredicted RBP2.43□□□□□ -2.02
SHE9YDR393W CRH1P53301 507 aa2.43□□□□□ -2.02
SHE9YDR393W ADA2Q02336 434 aa2.43□□□□□ -2.02
SHE9YDR393W LIP2Q06005 328 aa2.43□□□□□ -2.02
SHE9YDR393W NDE2Q07500 545 aa2.43□□□□□ -2.02
SHE9YDR393W TY1B-DR4Q07793 1604 aa2.42□□□□□ -2.02
SHE9YDR393W ADH1P00330 348 aaKnown RBP2.42□□□□□ -2.02
SHE9YDR393W COX4P04037 155 aa2.42□□□□□ -2.02
SHE9YDR393W NAM2P11325 894 aa2.42□□□□□ -2.02
SHE9YDR393W AAT2P23542 418 aaKnown RBP2.42□□□□□ -2.02
SHE9YDR393W APE2P32454 952 aaKnown RBP2.42□□□□□ -2.02
SHE9YDR393W REC114P32841 428 aa2.42□□□□□ -2.02
SHE9YDR393W PFS2P42841 465 aaKnown RBP2.42□□□□□ -2.02
SHE9YDR393W JID1Q12350 301 aa2.42□□□□□ -2.02
SHE9YDR393W TCB3Q03640 1545 aaKnown RBP2.42□□□□□ -2.02
SHE9YDR393W HIS4P00815 799 aaKnown RBP2.41□□□□□ -2.02
SHE9YDR393W RHO2P06781 192 aa2.41□□□□□ -2.02
SHE9YDR393W SEC53P07283 254 aaKnown RBP2.41□□□□□ -2.02
SHE9YDR393W CYS4P32582 507 aaKnown RBP2.41□□□□□ -2.02
SHE9YDR393W MUD2P36084 527 aaKnown RBP2.41□□□□□ -2.02
SHE9YDR393W LYS1P38998 373 aaRIP-Chip data2.41□□□□□ -2.02not detected
SHE9YDR393W JLP2P40206 208 aa2.41□□□□□ -2.02
SHE9YDR393W PGU1P47180 361 aa2.41□□□□□ -2.02
SHE9YDR393W HST1P53685 503 aa2.41□□□□□ -2.02
SHE9YDR393W HSP31Q04432 237 aa2.41□□□□□ -2.02
SHE9YDR393W SGT1Q08446 395 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms