RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	PEX18	P38855	283 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	STN1	P38960	494 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	SDS3	P40505	327 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	NUP84	P52891	726 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	TIM11	P81449	96 aa	Predicted RBP	4.57	□□□□□ -1.68
UBC1	YDR177W	MUK1	Q02866	612 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	GIP3	Q03016	1276 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	EKI1	Q03764	534 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	YMR310C	Q04867	317 aa	Predicted RBP	4.57	□□□□□ -1.68
UBC1	YDR177W	PIG1	Q06216	648 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	SSK1	Q07084	712 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	REX4	Q08237	289 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	AAD15	Q08361	143 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	PUS9	Q12069	462 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	NCE102	Q12207	173 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
UBC1	YDR177W	APC2	Q12440	853 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	HIS4	P00815	799 aa	Known RBP	4.56	□□□□□ -1.68
UBC1	YDR177W	RNQ1	P25367	405 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	HMX1	P32339	317 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
UBC1	YDR177W	MSN2	P33748	704 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	VPS41	P38959	992 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	END3	P39013	349 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	VRG4	P40107	337 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	GAT2	P40209	560 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	ALF1	P53904	254 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	YNL146W	P53906	100 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	CTL1	Q03220	320 aa	Known RBP	4.56	□□□□□ -1.68
UBC1	YDR177W	RNH1	Q04740	348 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	YPR078C	Q06813	372 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	RUD3	Q12234	484 aa	Known RBP	4.56	□□□□□ -1.68
UBC1	YDR177W	NDJ1	Q12366	352 aa		4.56	□□□□□ -1.68
UBC1	YDR177W	YER145C-A	A0A023PYF4	145 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	AQY1	P0CD91	305 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	MAK32	P23060	363 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	SPO11	P23179	398 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	RPI1	P23250	407 aa	Known RBP	4.55	□□□□□ -1.68
UBC1	YDR177W	GID7	P25569	745 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	GEX1	P25596	615 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	CYS4	P32582	507 aa	Known RBP	4.55	□□□□□ -1.68
UBC1	YDR177W	RAD24	P32641	659 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	INM1	P38710	295 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	LIN1	P38852	340 aa	Predicted RBP	4.55	□□□□□ -1.68
UBC1	YDR177W	EMC2	P47133	292 aa	Known RBP	4.55	□□□□□ -1.68
UBC1	YDR177W	STB4	P50104	949 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	YGL114W	P53134	725 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	ASI1	P54074	624 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	TAF12	Q03761	539 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	TPO3	Q06451	622 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	BSP1	Q06604	576 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	PEX27	Q08580	376 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	YLL056C	Q12177	298 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	GLE1	Q12315	538 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	ATG2	P53855	1592 aa		4.55	□□□□□ -1.68
UBC1	YDR177W	STE2	D6VTK4	431 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	VPS63	O13549	108 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	YPR089W	O13585	888 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	RAD52	P06778	471 aa	Known RBP	4.54	□□□□□ -1.68
UBC1	YDR177W	MAS1	P10507	462 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	EXO70	P19658	623 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	SAR1	P20606	190 aa	Known RBP	4.54	□□□□□ -1.68
UBC1	YDR177W	RAD57	P25301	460 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	FUN19	P28003	413 aa	Predicted RBP	4.54	□□□□□ -1.68
UBC1	YDR177W	APE2	P32454	952 aa	Known RBP	4.54	□□□□□ -1.68
UBC1	YDR177W	SOR1	P35497	357 aa	Known RBP	4.54	□□□□□ -1.68
UBC1	YDR177W	PCA1	P38360	1216 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	RFC3	P38629	340 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
UBC1	YDR177W	ERV46	P39727	415 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	YEL020C	P39994	560 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	PHO86	P46956	311 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	LIA1	P47120	325 aa	Known RBP	4.54	□□□□□ -1.68
UBC1	YDR177W	YGL082W	P53155	381 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	SOL4	P53315	255 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	ABZ2	Q03266	374 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	MDM30	Q05930	598 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	YDL218W	Q07629	317 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	SOR2	Q07786	357 aa		4.54	□□□□□ -1.68
UBC1	YDR177W	PEP1	P32319	1579 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	NFT1	P0CE68	1218 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	GAL3	P13045	520 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	PSO2	P30620	661 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	YMC1	P32331	307 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	ATP11	P32453	318 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	YNK1	P36010	153 aa	Known RBP	4.53	□□□□□ -1.68
UBC1	YDR177W	PHO90	P39535	881 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	YIL060W	P40519	144 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	SYG1	P40528	902 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	SNL1	P40548	159 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	BNA3	P47039	444 aa	Known RBP	4.53	□□□□□ -1.68
UBC1	YDR177W	IMD3	P50095	523 aa	Known RBP	4.53	□□□□□ -1.68
UBC1	YDR177W	VOA1	P53262	265 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	GPI1	P53306	609 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	RTT102	P53330	157 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	MPP6	P53725	186 aa	Predicted RBP	4.53	□□□□□ -1.68
UBC1	YDR177W	YIF1	P53845	314 aa	Known RBP	4.53	□□□□□ -1.68
UBC1	YDR177W	RHO4	Q00246	291 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	TLG1	Q03322	224 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	GLO2	Q05584	274 aa		4.53	□□□□□ -1.68
UBC1	YDR177W	KAP95	Q06142	861 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms