RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W RRD2Q12461 358 aa5.56□□□□□ -1.52
VMS1YDR049W TUS1Q06412 1307 aa5.56□□□□□ -1.52
VMS1YDR049W MF(ALPHA)1P01149 165 aa5.55□□□□□ -1.52
VMS1YDR049W YML003WP0CF16 290 aa5.55□□□□□ -1.52
VMS1YDR049W SNF6P18888 332 aa5.55□□□□□ -1.52
VMS1YDR049W PMI40P29952 429 aaKnown RBP5.55□□□□□ -1.52
VMS1YDR049W RIM1P32445 135 aaKnown RBP5.55□□□□□ -1.52
VMS1YDR049W YSC84P32793 468 aa5.55□□□□□ -1.52
VMS1YDR049W SKG6P32900 734 aaPredicted RBP5.55□□□□□ -1.52
VMS1YDR049W SPO23P33757 523 aa5.55□□□□□ -1.52
VMS1YDR049W CRG1P38892 291 aaRIP-Chip data5.55□□□□□ -1.52not detected
VMS1YDR049W ALP1P38971 573 aa5.55□□□□□ -1.52
VMS1YDR049W THO1P40040 218 aaKnown RBP5.55□□□□□ -1.52
VMS1YDR049W RSM25P40496 264 aa5.55□□□□□ -1.52
VMS1YDR049W COS12P53053 380 aa5.55□□□□□ -1.52
VMS1YDR049W RRN9P53437 365 aa5.55□□□□□ -1.52
VMS1YDR049W FMP30Q02883 468 aa5.55□□□□□ -1.52
VMS1YDR049W PRM15Q03262 622 aa5.55□□□□□ -1.52
VMS1YDR049W COX2P00410 251 aa5.54□□□□□ -1.52
VMS1YDR049W ERG20P08524 352 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W WHI2P12611 486 aa5.54□□□□□ -1.52
VMS1YDR049W MRP13P12686 339 aa5.54□□□□□ -1.52
VMS1YDR049W YAP1P19880 650 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W RPL24BP24000 155 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W MEI4P29467 408 aa5.54□□□□□ -1.52
VMS1YDR049W NUF2P33895 451 aa5.54□□□□□ -1.52
VMS1YDR049W RPF2P36160 344 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W HXT9P40885 567 aa5.54□□□□□ -1.52
VMS1YDR049W ADE16P54113 591 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W HXT11P54862 567 aa5.54□□□□□ -1.52
VMS1YDR049W DCR2Q05924 578 aa5.54□□□□□ -1.52
VMS1YDR049W IPK1Q06667 281 aa5.54□□□□□ -1.52
VMS1YDR049W MRPL35Q06678 367 aa5.54□□□□□ -1.52
VMS1YDR049W GRE1Q08969 168 aa5.54□□□□□ -1.52
VMS1YDR049W AIM41Q12032 185 aa5.54□□□□□ -1.52
VMS1YDR049W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
VMS1YDR049W YLR108CQ12259 485 aa5.54□□□□□ -1.52
VMS1YDR049W TRM732Q03496 1420 aa5.54□□□□□ -1.52
VMS1YDR049W RAD1P06777 1100 aa5.54□□□□□ -1.52
VMS1YDR049W ERG11P10614 530 aa5.54□□□□□ -1.52
VMS1YDR049W HXT2P23585 541 aa5.54□□□□□ -1.52
VMS1YDR049W GCG1P32656 232 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W PRP18P33411 251 aaPredicted RBP5.54□□□□□ -1.52
VMS1YDR049W AST1P35183 429 aa5.54□□□□□ -1.52
VMS1YDR049W LDB7P38210 180 aa5.54□□□□□ -1.52
VMS1YDR049W FES1P38260 290 aa5.54□□□□□ -1.52
VMS1YDR049W YJL206CP39529 758 aa5.54□□□□□ -1.52
VMS1YDR049W SOP4P39543 234 aaPredicted RBP5.54□□□□□ -1.52
VMS1YDR049W ICE2P40499 491 aa5.54□□□□□ -1.52
VMS1YDR049W YFL066CP43538 392 aa5.54□□□□□ -1.52
VMS1YDR049W VMA10P48836 114 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W YGL159WP53110 370 aa5.54□□□□□ -1.52
VMS1YDR049W LSG1P53145 640 aaKnown RBP5.54□□□□□ -1.52
VMS1YDR049W OCA2P53949 197 aa5.54□□□□□ -1.52
VMS1YDR049W ORC3P54790 616 aa5.54□□□□□ -1.52
VMS1YDR049W SKI8Q02793 397 aaPredicted RBP5.54□□□□□ -1.52
VMS1YDR049W YMR074CQ04773 145 aa5.54□□□□□ -1.52
VMS1YDR049W YEH2Q07950 538 aa5.54□□□□□ -1.52
VMS1YDR049W YDL176WQ12027 708 aa5.54□□□□□ -1.52
VMS1YDR049W SEY1Q99287 776 aa5.54□□□□□ -1.52
VMS1YDR049W PMR1P13586 950 aa5.53□□□□□ -1.52
VMS1YDR049W FBA1P14540 359 aaKnown RBP5.53□□□□□ -1.52
VMS1YDR049W CBF1P17106 351 aa5.53□□□□□ -1.52
VMS1YDR049W YSR3P23501 404 aa5.53□□□□□ -1.52
VMS1YDR049W RIB1P38066 345 aa5.53□□□□□ -1.52
VMS1YDR049W ARA1P38115 344 aa5.53□□□□□ -1.52
VMS1YDR049W SIC1P38634 284 aa5.53□□□□□ -1.52
VMS1YDR049W SBE22P38814 852 aa5.53□□□□□ -1.52
VMS1YDR049W PFS1P38872 237 aa5.53□□□□□ -1.52
VMS1YDR049W YHR210CP38893 341 aa5.53□□□□□ -1.52
VMS1YDR049W SAK1P38990 1142 aa5.53□□□□□ -1.52
VMS1YDR049W GIM4P40005 111 aaKnown RBP5.53□□□□□ -1.52
VMS1YDR049W YNL195CP40168 261 aa5.53□□□□□ -1.52
VMS1YDR049W GAB1P41733 394 aa5.53□□□□□ -1.52
VMS1YDR049W RPS7BP48164 190 aaKnown RBP5.53□□□□□ -1.52
VMS1YDR049W SDH1Q00711 640 aa5.53□□□□□ -1.52
VMS1YDR049W SPP2Q02521 185 aa5.53□□□□□ -1.52
VMS1YDR049W NUP116Q02630 1113 aa5.53□□□□□ -1.52
VMS1YDR049W YMR209CQ03648 457 aa5.53□□□□□ -1.52
VMS1YDR049W TAF12Q03761 539 aa5.53□□□□□ -1.52
VMS1YDR049W CDC123Q05791 360 aa5.53□□□□□ -1.52
VMS1YDR049W SPO77Q06134 477 aa5.53□□□□□ -1.52
VMS1YDR049W YDL114WQ07530 308 aa5.53□□□□□ -1.52
VMS1YDR049W DIS3Q08162 1001 aaKnown RBP5.53□□□□□ -1.52
VMS1YDR049W YOR223WQ12015 292 aa5.53□□□□□ -1.52
VMS1YDR049W VAM3Q12241 283 aa5.53□□□□□ -1.52
VMS1YDR049W MYO2P19524 1574 aaKnown RBP5.53□□□□□ -1.52
VMS1YDR049W PAB1P04147 577 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
VMS1YDR049W ALG1P16661 449 aa5.52□□□□□ -1.53
VMS1YDR049W RBK1P25332 333 aa5.52□□□□□ -1.53
VMS1YDR049W GIT1P25346 518 aa5.52□□□□□ -1.53
VMS1YDR049W PTC6P25646 442 aa5.52□□□□□ -1.53
VMS1YDR049W SPS19P32573 292 aaKnown RBP5.52□□□□□ -1.53
VMS1YDR049W AME1P38313 324 aa5.52□□□□□ -1.53
VMS1YDR049W SAF1P38352 637 aa5.52□□□□□ -1.53
VMS1YDR049W PLB1P39105 664 aa5.52□□□□□ -1.53
VMS1YDR049W IDS2P46958 469 aa5.52□□□□□ -1.53
VMS1YDR049W UBX6P47049 396 aa5.52□□□□□ -1.53
VMS1YDR049W RFX1P48743 811 aa5.52□□□□□ -1.53
VMS1YDR049W ROG1P53118 685 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms