RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PXR1P53335 271 aaPredicted RBP5.47□□□□□ -1.53
PDB1YBR221C YKR011CQ02209 353 aa5.47□□□□□ -1.53
PDB1YBR221C WAR1Q03631 944 aa5.47□□□□□ -1.53
PDB1YBR221C ENT5Q03769 411 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C YMR130WQ04223 302 aa5.47□□□□□ -1.53
PDB1YBR221C RSA3Q05942 220 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C COS7Q07788 383 aa5.47□□□□□ -1.53
PDB1YBR221C ATG31Q12421 196 aa5.47□□□□□ -1.53
PDB1YBR221C NCB2Q92317 146 aa5.47□□□□□ -1.53
PDB1YBR221C YBR085C-AO43137 85 aa5.46□□□□□ -1.54
PDB1YBR221C GPH1P06738 902 aaKnown RBP5.46□□□□□ -1.54
PDB1YBR221C CDC21P06785 304 aa5.46□□□□□ -1.54
PDB1YBR221C ARD1P07347 238 aaPredicted RBP5.46□□□□□ -1.54
PDB1YBR221C PDA1P16387 420 aaKnown RBP5.46□□□□□ -1.54
PDB1YBR221C ZRC1P20107 442 aa5.46□□□□□ -1.54
PDB1YBR221C CHL1P22516 861 aaPredicted RBP5.46□□□□□ -1.54
PDB1YBR221C PPA2P28239 310 aa5.46□□□□□ -1.54
PDB1YBR221C TYE7P33122 291 aaPredicted RBP5.46□□□□□ -1.54
PDB1YBR221C TIF3P34167 436 aaKnown RBP5.46□□□□□ -1.54
PDB1YBR221C HIT1P46973 164 aa5.46□□□□□ -1.54
PDB1YBR221C LSM1P47017 172 aaKnown RBP5.46□□□□□ -1.54
PDB1YBR221C DIA3P52290 468 aa5.46□□□□□ -1.54
PDB1YBR221C LSG1P53145 640 aaKnown RBP5.46□□□□□ -1.54
PDB1YBR221C YGL036WP53185 909 aaPredicted RBP5.46□□□□□ -1.54
PDB1YBR221C TAM41P53230 385 aa5.46□□□□□ -1.54
PDB1YBR221C YNL260CP53846 198 aa5.46□□□□□ -1.54
PDB1YBR221C VAC7P53950 1165 aa5.46□□□□□ -1.54
PDB1YBR221C FIN1Q03898 291 aa5.46□□□□□ -1.54
PDB1YBR221C ARO10Q06408 635 aa5.46□□□□□ -1.54
PDB1YBR221C DAP1Q12091 152 aa5.46□□□□□ -1.54
PDB1YBR221C YDR524C-BQ3E6R4 66 aa5.46□□□□□ -1.54
PDB1YBR221C LEU4P06208 619 aaKnown RBP5.45□□□□□ -1.54
PDB1YBR221C FRS1P15624 595 aaKnown RBP5.45□□□□□ -1.54
PDB1YBR221C SNF5P18480 905 aa5.45□□□□□ -1.54
PDB1YBR221C PPH22P23595 377 aa5.45□□□□□ -1.54
PDB1YBR221C DAL2P25335 343 aa5.45□□□□□ -1.54
PDB1YBR221C RHB1P25378 209 aa5.45□□□□□ -1.54
PDB1YBR221C CWP1P28319 239 aa5.45□□□□□ -1.54
PDB1YBR221C PRR1P28708 518 aa5.45□□□□□ -1.54
PDB1YBR221C PPS1P38148 807 aa5.45□□□□□ -1.54
PDB1YBR221C ZTA1P38230 334 aaKnown RBP5.45□□□□□ -1.54
PDB1YBR221C HRB1P38922 454 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
PDB1YBR221C FHL1P39521 936 aa5.45□□□□□ -1.54
PDB1YBR221C SAP1P39955 897 aaKnown RBP5.45□□□□□ -1.54
PDB1YBR221C NDC80P40460 691 aa5.45□□□□□ -1.54
PDB1YBR221C YIL001WP40560 513 aa5.45□□□□□ -1.54
PDB1YBR221C BIT61P47041 543 aa5.45□□□□□ -1.54
PDB1YBR221C IBA57P47158 497 aa5.45□□□□□ -1.54
PDB1YBR221C YIP5P53108 310 aa5.45□□□□□ -1.54
PDB1YBR221C ARI1P53111 347 aaKnown RBP5.45□□□□□ -1.54
PDB1YBR221C MRS2Q01926 470 aa5.45□□□□□ -1.54
PDB1YBR221C MFM1Q02783 413 aa5.45□□□□□ -1.54
PDB1YBR221C YMR265CQ03508 461 aaKnown RBP5.45□□□□□ -1.54
PDB1YBR221C YDL144CQ07589 356 aa5.45□□□□□ -1.54
PDB1YBR221C TIP41Q12199 356 aa5.45□□□□□ -1.54
PDB1YBR221C INP53Q12271 1107 aa5.45□□□□□ -1.54
PDB1YBR221C TY1A-DR3Q12441 440 aa5.45□□□□□ -1.54
PDB1YBR221C DFG16Q99234 619 aa5.45□□□□□ -1.54
PDB1YBR221C TEL1P38110 2787 aa5.45□□□□□ -1.54
PDB1YBR221C RPP1AP05318 106 aaPredicted RBP5.44□□□□□ -1.54
PDB1YBR221C CDC4P07834 779 aa5.44□□□□□ -1.54
PDB1YBR221C RPL35AP0CX84 120 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C RPL35BP0CX85 120 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C MATALPHA2P0CY08 210 aa5.44□□□□□ -1.54
PDB1YBR221C HMLALPHA2P0CY09 210 aa5.44□□□□□ -1.54
PDB1YBR221C WHI2P12611 486 aa5.44□□□□□ -1.54
PDB1YBR221C VPS33P20795 691 aa5.44□□□□□ -1.54
PDB1YBR221C RPL24BP24000 155 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C CIN8P27895 1000 aa5.44□□□□□ -1.54
PDB1YBR221C IMP3P32899 183 aaPredicted RBP5.44□□□□□ -1.54
PDB1YBR221C CBR1P38626 284 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C THO1P40040 218 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C PIG2P40187 538 aa5.44□□□□□ -1.54
PDB1YBR221C AIM22P47051 409 aa5.44□□□□□ -1.54
PDB1YBR221C IMD4P50094 524 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C SLI1P53304 468 aa5.44□□□□□ -1.54
PDB1YBR221C SOL4P53315 255 aa5.44□□□□□ -1.54
PDB1YBR221C EAF7P53911 425 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C MTG1Q03151 367 aaPredicted RBP5.44□□□□□ -1.54
PDB1YBR221C PRM15Q03262 622 aa5.44□□□□□ -1.54
PDB1YBR221C RCR2Q03446 210 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C EKI1Q03764 534 aa5.44□□□□□ -1.54
PDB1YBR221C HMO1Q03973 246 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C MYO5Q04439 1219 aaKnown RBP5.44□□□□□ -1.54
PDB1YBR221C THI7Q05998 598 aa5.44□□□□□ -1.54
PDB1YBR221C PIG1Q06216 648 aa5.44□□□□□ -1.54
PDB1YBR221C RXT3Q07458 294 aa5.44□□□□□ -1.54
PDB1YBR221C RLM1Q12224 676 aa5.44□□□□□ -1.54
PDB1YBR221C SEY1Q99287 776 aa5.44□□□□□ -1.54
PDB1YBR221C CAR1P00812 333 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C RPS19AP07280 144 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C RPS19BP07281 144 aaPredicted RBP5.43□□□□□ -1.54
PDB1YBR221C YUR1P26725 428 aa5.43□□□□□ -1.54
PDB1YBR221C PSO2P30620 661 aa5.43□□□□□ -1.54
PDB1YBR221C PRE4P30657 266 aa5.43□□□□□ -1.54
PDB1YBR221C PDB1P32473 366 aaKnown RBP5.43□□□□□ -1.54
PDB1YBR221C SRB5P32585 307 aa5.43□□□□□ -1.54
PDB1YBR221C UTR4P32626 227 aa5.43□□□□□ -1.54
PDB1YBR221C ECT1P33412 323 aa5.43□□□□□ -1.54
PDB1YBR221C RPC25P35718 212 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms