RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 TIM17P39515 158 aa2.11□□□□□ -2.07
snR56snR56 VIP1Q06685 1146 aaKnown RBP2.11□□□□□ -2.07
snR56snR56 BRR1Q99177 341 aaPredicted RBP2.11□□□□□ -2.07
snR56snR56 KAR9P32526 644 aa2.1□□□□□ -2.07
snR56snR56 RCK2P38623 610 aa2.1□□□□□ -2.07
snR56snR56 AXL2P38928 823 aa2.1□□□□□ -2.07
snR56snR56 SYG1P40528 902 aa2.1□□□□□ -2.07
snR56snR56 ARC1P46672 376 aaKnown RBP2.1□□□□□ -2.07
snR56snR56 URB2P47108 1174 aa2.1□□□□□ -2.07
snR56snR56 PCP1P53259 346 aa2.1□□□□□ -2.07
snR56snR56 PPM1Q04081 328 aa2.1□□□□□ -2.07
snR56snR56 MUM3Q08750 479 aa2.1□□□□□ -2.07
snR56snR56 PLP2Q12017 286 aa2.1□□□□□ -2.07
snR56snR56 RRD2Q12461 358 aa2.1□□□□□ -2.07
snR56snR56 PSK1P31374 1356 aa2.1□□□□□ -2.07
snR56snR56 CYC3P06182 269 aa2.09□□□□□ -2.07
snR56snR56 KAR3P17119 729 aa2.09□□□□□ -2.07
snR56snR56 CSE2P33308 149 aa2.09□□□□□ -2.07
snR56snR56 SSN8P47821 323 aa2.09□□□□□ -2.07
snR56snR56 YML037CQ03703 340 aa2.09□□□□□ -2.07
snR56snR56 COR1P07256 457 aa2.08□□□□□ -2.08
snR56snR56 HSC82P15108 705 aaKnown RBP2.08□□□□□ -2.08
snR56snR56 PAP1P29468 568 aaKnown RBP2.08□□□□□ -2.08
snR56snR56 PSY4P38193 441 aa2.08□□□□□ -2.08
snR56snR56 MIG3P39943 394 aa2.08□□□□□ -2.08
snR56snR56 DFG10P40526 253 aa2.08□□□□□ -2.08
snR56snR56 LAM5P43560 674 aa2.08□□□□□ -2.08
snR56snR56 UBX4P54730 416 aa2.08□□□□□ -2.08
snR56snR56 YDR239CQ03780 787 aa2.08□□□□□ -2.08
snR56snR56 PDS5Q04264 1277 aa2.08□□□□□ -2.08
snR56snR56 MFB1Q04922 465 aa2.08□□□□□ -2.08
snR56snR56 MSR1P38714 643 aa2.07□□□□□ -2.08
snR56snR56 KEL1P38853 1164 aaKnown RBP2.07□□□□□ -2.08
snR56snR56 MBB1P39534 108 aa2.07□□□□□ -2.08
snR56snR56 PFS2P42841 465 aaKnown RBP2.07□□□□□ -2.08
snR56snR56 FLC3P53121 802 aa2.07□□□□□ -2.08
snR56snR56 IPI3P53877 555 aa2.07□□□□□ -2.08
snR56snR56 MRD1Q06106 887 aaKnown RBP2.07□□□□□ -2.08
snR56snR56 LEU4P06208 619 aaKnown RBP2.06□□□□□ -2.08
snR56snR56 PRE8P23639 250 aa2.06□□□□□ -2.08
snR56snR56 TIP1P27654 210 aaPredicted RBP2.06□□□□□ -2.08
snR56snR56 SLC1P33333 303 aa2.06□□□□□ -2.08
snR56snR56 ERP2P39704 215 aa2.06□□□□□ -2.08
snR56snR56 AFG3P39925 761 aa2.06□□□□□ -2.08
snR56snR56 YER186CP40101 306 aa2.06□□□□□ -2.08
snR56snR56 POP1P41812 875 aa2.06□□□□□ -2.08
snR56snR56 YMR181CQ03231 154 aa2.06□□□□□ -2.08
snR56snR56 YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
snR56snR56 AHC1Q12433 566 aa2.06□□□□□ -2.08
snR56snR56 SSM4P40318 1319 aa2.06□□□□□ -2.08
snR56snR56 CDC24P11433 854 aaPredicted RBP2.05□□□□□ -2.08
snR56snR56 FMT1P32785 401 aa2.05□□□□□ -2.08
snR56snR56 CCT6P39079 546 aa2.05□□□□□ -2.08
snR56snR56 ITR1P30605 584 aa2.04□□□□□ -2.08
snR56snR56 SPT10P35208 640 aa2.04□□□□□ -2.08
snR56snR56 YCR041WP37265 110 aa2.04□□□□□ -2.08
snR56snR56 LCL3P53153 274 aa2.04□□□□□ -2.08
snR56snR56 YSA1Q01976 231 aa2.04□□□□□ -2.08
snR56snR56 PKH2Q12236 1081 aaKnown RBP2.04□□□□□ -2.08
snR56snR56 POL4P25615 582 aa2.03□□□□□ -2.08
snR56snR56 SMY1P32364 656 aaKnown RBP2.03□□□□□ -2.08
snR56snR56 YMR147WP40218 223 aaKnown RBP2.03□□□□□ -2.08
snR56snR56 ALG5P40350 334 aa2.03□□□□□ -2.08
snR56snR56 YGR018CP53211 109 aa2.03□□□□□ -2.08
snR56snR56 MKC7P53379 596 aa2.03□□□□□ -2.08
snR56snR56 DIA1P54005 336 aa2.03□□□□□ -2.08
snR56snR56 SLG1P54867 378 aa2.03□□□□□ -2.08
snR56snR56 IME2P32581 645 aa2.02□□□□□ -2.09
snR56snR56 CRH1P53301 507 aa2.02□□□□□ -2.09
snR56snR56 GTR1Q00582 310 aa2.02□□□□□ -2.09
snR56snR56 MRPS16Q02608 121 aa2.02□□□□□ -2.09
snR56snR56 SOV1Q04748 898 aa2.02□□□□□ -2.09
snR56snR56 DNL4Q08387 944 aaPredicted RBP2.02□□□□□ -2.09
snR56snR56 TIM18Q08749 192 aa2.02□□□□□ -2.09
snR56snR56 IZH2Q12442 317 aa2.02□□□□□ -2.09
snR56snR56 RAV1P47104 1357 aa2.01□□□□□ -2.09
snR56snR56 ADH1P00330 348 aaKnown RBP2.01□□□□□ -2.09
snR56snR56 EST1P17214 699 aaPredicted RBP2.01□□□□□ -2.09
snR56snR56 CYS4P32582 507 aaKnown RBP2.01□□□□□ -2.09
snR56snR56 MUD1P32605 298 aaKnown RBP2.01□□□□□ -2.09
snR56snR56 MUM2P38236 366 aa2.01□□□□□ -2.09
snR56snR56 YIP1P53039 248 aa2.01□□□□□ -2.09
snR56snR56 SNX3Q08826 162 aaKnown RBP2.01□□□□□ -2.09
snR56snR56 CBP6P07253 162 aaPredicted RBP2□□□□□ -2.09
snR56snR56 SLY1P22213 666 aa2□□□□□ -2.09
snR56snR56 DTR1P38125 572 aa2□□□□□ -2.09
snR56snR56 SAP185P40856 1058 aa2□□□□□ -2.09
snR56snR56 IMD4P50094 524 aaKnown RBP2□□□□□ -2.09
snR56snR56 ATP22P50273 684 aaPredicted RBP2□□□□□ -2.09
snR56snR56 YPR022CQ12139 1133 aa2□□□□□ -2.09
snR56snR56 RPL19AP0CX82 189 aaKnown RBP1.99□□□□□ -2.09
snR56snR56 RPL19BP0CX83 189 aaPredicted RBP1.99□□□□□ -2.09
snR56snR56 KAP123P40069 1113 aaKnown RBP1.99□□□□□ -2.09
snR56snR56 VPS38Q05919 439 aa1.99□□□□□ -2.09
snR56snR56 SKM1Q12469 655 aa1.99□□□□□ -2.09
snR56snR56 FUM1P08417 488 aaKnown RBP1.98□□□□□ -2.09
snR56snR56 YCK1P23291 538 aa1.98□□□□□ -2.09
snR56snR56 REC114P32841 428 aa1.98□□□□□ -2.09
snR56snR56 CBP4P37267 147 aa1.98□□□□□ -2.09
snR56snR56 REG2P38232 338 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms