RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YHR214WP0CX19 203 aa-0.07□□□□□ -2.42
snR50snR50 TY2A-FP0CX61 438 aa-0.07□□□□□ -2.42
snR50snR50 TY2A-GR2P0CX62 438 aa-0.07□□□□□ -2.42
snR50snR50 SAM1P10659 382 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 SAM2P19358 384 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 RPI1P23250 407 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 TY2A-CP25383 438 aa-0.07□□□□□ -2.42
snR50snR50 BOS1P25385 244 aa-0.07□□□□□ -2.42
snR50snR50 HIR2P32480 875 aa-0.07□□□□□ -2.42
snR50snR50 YBL055CP34220 418 aaPredicted RBP-0.07□□□□□ -2.42
snR50snR50 NUP133P36161 1157 aa-0.07□□□□□ -2.42
snR50snR50 YBR071WP38243 211 aa-0.07□□□□□ -2.42
snR50snR50 YBR137WP38276 179 aa-0.07□□□□□ -2.42
snR50snR50 STP2P38704 541 aa-0.07□□□□□ -2.42
snR50snR50 NPR3P38742 1146 aa-0.07□□□□□ -2.42
snR50snR50 TRR2P38816 342 aa-0.07□□□□□ -2.42
snR50snR50 PFS1P38872 237 aa-0.07□□□□□ -2.42
snR50snR50 BAT1P38891 393 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 AFG3P39925 761 aa-0.07□□□□□ -2.42
snR50snR50 OXA1P39952 402 aa-0.07□□□□□ -2.42
snR50snR50 PFK26P40433 827 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 COS4P43542 379 aa-0.07□□□□□ -2.42
snR50snR50 URB2P47108 1174 aa-0.07□□□□□ -2.42
snR50snR50 UPF3P48412 387 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 DIA3P52290 468 aa-0.07□□□□□ -2.42
snR50snR50 ARE2P53629 642 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 MTQ1P53944 314 aa-0.07□□□□□ -2.42
snR50snR50 RPT6Q01939 405 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 TY2A-DR2Q03483 438 aa-0.07□□□□□ -2.42
snR50snR50 VTI1Q04338 217 aa-0.07□□□□□ -2.42
snR50snR50 LDS2Q08218 356 aa-0.07□□□□□ -2.42
snR50snR50 THP1Q08231 455 aa-0.07□□□□□ -2.42
snR50snR50 TY2A-BQ12260 438 aa-0.07□□□□□ -2.42
snR50snR50 TY2A-OR2Q12293 438 aa-0.07□□□□□ -2.42
snR50snR50 TY2A-DR1Q12392 438 aa-0.07□□□□□ -2.42
snR50snR50 TY2A-OR1Q12439 438 aa-0.07□□□□□ -2.42
snR50snR50 BRR1Q99177 341 aaPredicted RBP-0.07□□□□□ -2.42
snR50snR50 TY2A-DR3Q99303 438 aa-0.07□□□□□ -2.42
snR50snR50 PUP3P25451 205 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 TIP1P27654 210 aaPredicted RBP-0.08□□□□□ -2.42
snR50snR50 MUD1P32605 298 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 ALK2P32789 676 aaPredicted RBP-0.08□□□□□ -2.42
snR50snR50 RPL32P38061 130 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 YBL081WP38180 368 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 YBR138CP38277 524 aa-0.08□□□□□ -2.42
snR50snR50 CCT6P39079 546 aa-0.08□□□□□ -2.42
snR50snR50 CIN4P39110 191 aa-0.08□□□□□ -2.42
snR50snR50 BUR6P40096 142 aa-0.08□□□□□ -2.42
snR50snR50 VHS2P40463 436 aa-0.08□□□□□ -2.42
snR50snR50 SEC24P40482 926 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 FAF1P40546 346 aaPredicted RBP-0.08□□□□□ -2.42
snR50snR50 IME4P41833 600 aa-0.08□□□□□ -2.42
snR50snR50 LAM5P43560 674 aa-0.08□□□□□ -2.42
snR50snR50 YFR057WP43625 151 aa-0.08□□□□□ -2.42
snR50snR50 ALK1P43633 760 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 FAR3P46671 204 aa-0.08□□□□□ -2.42
snR50snR50 TRS85P46944 698 aa-0.08□□□□□ -2.42
snR50snR50 COQ5P49017 307 aa-0.08□□□□□ -2.42
snR50snR50 APT1P49435 187 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 OCA1P50946 238 aaPredicted RBP-0.08□□□□□ -2.42
snR50snR50 VPS4P52917 437 aa-0.08□□□□□ -2.42
snR50snR50 VHT1P53241 593 aa-0.08□□□□□ -2.42
snR50snR50 PAP2P53632 584 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 EFM6P53970 246 aa-0.08□□□□□ -2.42
snR50snR50 FRE8Q12209 686 aa-0.08□□□□□ -2.42
snR50snR50 PKH2Q12236 1081 aaKnown RBP-0.08□□□□□ -2.42
snR50snR50 AHC1Q12433 566 aa-0.08□□□□□ -2.42
snR50snR50 PIF1P07271 859 aa-0.09□□□□□ -2.42
snR50snR50 MSI1P13712 422 aa-0.09□□□□□ -2.42
snR50snR50 PHO81P17442 1178 aa-0.09□□□□□ -2.42
snR50snR50 ZRC1P20107 442 aa-0.09□□□□□ -2.42
snR50snR50 PWP1P21304 576 aaKnown RBP-0.09□□□□□ -2.42
snR50snR50 SNT1P25357 1226 aa-0.09□□□□□ -2.42
snR50snR50 SYN8P31377 255 aa-0.09□□□□□ -2.42
snR50snR50 DEP1P31385 405 aa-0.09□□□□□ -2.42
snR50snR50 TKL2P33315 681 aa-0.09□□□□□ -2.42
snR50snR50 SKT5P34226 696 aa-0.09□□□□□ -2.42
snR50snR50 BNA4P38169 460 aa-0.09□□□□□ -2.42
snR50snR50 TCM62P38228 572 aaKnown RBP-0.09□□□□□ -2.42
snR50snR50 ICS2P38284 255 aa-0.09□□□□□ -2.42
snR50snR50 IST3P40565 148 aaPredicted RBP-0.09□□□□□ -2.42
snR50snR50 PTR3P43606 678 aa-0.09□□□□□ -2.42
snR50snR50 BIR1P47134 954 aa-0.09□□□□□ -2.42
snR50snR50 ALG12P53730 551 aa-0.09□□□□□ -2.42
snR50snR50 RPL21AQ02753 160 aaKnown RBP-0.09□□□□□ -2.42
snR50snR50 HOT1Q03213 719 aa-0.09□□□□□ -2.42
snR50snR50 IOC4Q04213 475 aa-0.09□□□□□ -2.42
snR50snR50 PSR1Q07800 427 aa-0.09□□□□□ -2.42
snR50snR50 PSK2Q08217 1101 aa-0.09□□□□□ -2.42
snR50snR50 TIM18Q08749 192 aa-0.09□□□□□ -2.42
snR50snR50 YOR283WQ12040 230 aaKnown RBP-0.09□□□□□ -2.42
snR50snR50 NUS1Q12063 375 aa-0.09□□□□□ -2.42
snR50snR50 RPL21BQ12672 160 aaKnown RBP-0.09□□□□□ -2.42
snR50snR50 HSH49Q99181 213 aaPredicted RBP-0.09□□□□□ -2.42
snR50snR50 CDC24P11433 854 aaPredicted RBP-0.1□□□□□ -2.43
snR50snR50 POL4P25615 582 aa-0.1□□□□□ -2.43
snR50snR50 ZIP1P31111 875 aa-0.1□□□□□ -2.43
snR50snR50 YEF1P32622 495 aa-0.1□□□□□ -2.43
snR50snR50 MRPL36P36531 177 aa-0.1□□□□□ -2.43
snR50snR50 FRM2P37261 193 aa-0.1□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms