RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	UTP25	P40498	721 aa	Known RBP	4.85	□□□□□ -1.63
SSO1	YPL232W	EFM4	P40516	257 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	DJP1	P40564	432 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	PAC11	P40960	533 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	ECO1	P43605	281 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	CCT8	P47079	568 aa	Known RBP	4.85	□□□□□ -1.63
SSO1	YPL232W	YJR115W	P47152	169 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	TEL2	P53038	688 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	CLD1	P53264	445 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	VPS38	Q05919	439 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	YLR352W	Q06479	807 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	RSC2	Q06488	889 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	ATG23	Q06671	453 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	YPR011C	Q12251	326 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	YRM1	Q12340	786 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	SRN2	Q99176	213 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	FLO9	P39712	1322 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	SSC1	P0CS90	654 aa	Known RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	SLY41	P22215	453 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	MAK32	P23060	363 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	RRP43	P25359	394 aa	Predicted RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	MGT1	P26188	188 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	SDH3	P33421	198 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	MTR2	P34232	184 aa	Known RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	MUP3	P38734	546 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	APE4	P38821	490 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	XBP1	P40489	647 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	UBP6	P43593	499 aa	Known RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	PDR16	P53860	351 aa	Known RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	DMA2	P53924	522 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	VPS16	Q03308	798 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	GOT1	Q03554	138 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	GAS3	Q03655	524 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	SPO20	Q04359	397 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	YPR174C	Q06616	221 aa	Predicted RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	HDA2	Q06629	674 aa		4.84	□□□□□ -1.63
SSO1	YPL232W	NOB1	Q08444	459 aa	Known RBP	4.84	□□□□□ -1.63
SSO1	YPL232W	ARG4	P04076	463 aa	Predicted RBP	4.83	□□□□□ -1.64
SSO1	YPL232W	RAD1	P06777	1100 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	YML002W	P0CF17	737 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	SPS100	P13130	326 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	VPS33	P20795	691 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	SPS22	P25380	463 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	URA7	P28274	579 aa	Known RBP	4.83	□□□□□ -1.64
SSO1	YPL232W	YIM1	P28625	365 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	CRM1	P30822	1084 aa	Known RBP	4.83	□□□□□ -1.64
SSO1	YPL232W	GCD6	P32501	712 aa	Known RBP	4.83	□□□□□ -1.64
SSO1	YPL232W	RRN3	P36070	627 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	MAL32	P38158	584 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	RKM3	P38222	552 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	REI1	P38344	393 aa	Predicted RBP	4.83	□□□□□ -1.64
SSO1	YPL232W	PKP1	P40530	394 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	MAD2	P40958	196 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	YJL043W	P47053	257 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	STE24	P47154	453 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	YGR067C	P53243	804 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	YNL260C	P53846	198 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	BOP3	P53958	396 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	SKI8	Q02793	397 aa	Predicted RBP	4.83	□□□□□ -1.64
SSO1	YPL232W	GIP3	Q03016	1276 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	GAS2	Q06135	555 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	AIM41	Q12032	185 aa		4.83	□□□□□ -1.64
SSO1	YPL232W	NCE102	Q12207	173 aa	RIP-Chip data	4.83	□□□□□ -1.64	not detected
SSO1	YPL232W	MCM1	P11746	286 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	TRX2	P22803	104 aa	Known RBP	4.82	□□□□□ -1.64
SSO1	YPL232W	SPB1	P25582	841 aa	Predicted RBP	4.82	□□□□□ -1.64
SSO1	YPL232W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SSO1	YPL232W	ZRG8	P40021	1076 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	YER034W	P40022	185 aa	Known RBP	4.82	□□□□□ -1.64
SSO1	YPL232W	PRM2	P40534	656 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SSO1	YPL232W	GCD14	P46959	383 aa	Predicted RBP	4.82	□□□□□ -1.64
SSO1	YPL232W	MDV1	P47025	714 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	BUD32	P53323	261 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	REX4	Q08237	289 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	RSA1	Q08932	381 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	YPL245W	Q12179	454 aa	Known RBP	4.82	□□□□□ -1.64
SSO1	YPL232W	UBX3	Q12229	455 aa		4.82	□□□□□ -1.64
SSO1	YPL232W	LEU4	P06208	619 aa	Known RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	CKI1	P20485	582 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	NPR1	P22211	790 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	ERG8	P24521	451 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	ERG9	P29704	444 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	ZIP1	P31111	875 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	PTM1	P32857	523 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	MCX1	P38323	520 aa	Predicted RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	CAB2	P40506	365 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	IRC6	P43615	237 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	EMC2	P47133	292 aa	Known RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	RAD17	P48581	401 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	SHY1	P53266	389 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	MKC7	P53379	596 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	KTR5	P53966	522 aa	Predicted RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	LSM3	P57743	89 aa	Known RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	CGI121	Q03705	181 aa	Known RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	MUS81	Q04149	632 aa	Predicted RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	YMR114C	Q04471	368 aa	Known RBP	4.81	□□□□□ -1.64
SSO1	YPL232W	APC4	Q04601	652 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	CRN1	Q06440	651 aa		4.81	□□□□□ -1.64
SSO1	YPL232W	RAD34	Q06665	692 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms