RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W REV1P12689 985 aa1.88□□□□□ -2.11
HSH155YMR288W SRP54P20424 541 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W SUR1P33300 382 aa1.88□□□□□ -2.11
HSH155YMR288W LAS1P36146 502 aaPredicted RBP1.88□□□□□ -2.11
HSH155YMR288W SCO2P38072 301 aa1.88□□□□□ -2.11
HSH155YMR288W SMC2P38989 1170 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W VPS75P53853 264 aa1.88□□□□□ -2.11
HSH155YMR288W REG1Q00816 1014 aa1.88□□□□□ -2.11
HSH155YMR288W MRPL13Q02204 264 aa1.88□□□□□ -2.11
HSH155YMR288W MTG1Q03151 367 aaPredicted RBP1.88□□□□□ -2.11
HSH155YMR288W YDL144CQ07589 356 aa1.88□□□□□ -2.11
HSH155YMR288W RRT8Q08219 342 aa1.88□□□□□ -2.11
HSH155YMR288W YPL272CQ08984 517 aa1.88□□□□□ -2.11
HSH155YMR288W RDL1Q12305 139 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W SFI1Q12369 946 aa1.88□□□□□ -2.11
HSH155YMR288W YOL159C-AQ3E769 90 aa1.88□□□□□ -2.11
HSH155YMR288W YOR019WQ99248 730 aa1.88□□□□□ -2.11
HSH155YMR288W ARG3P05150 338 aa1.88□□□□□ -2.11
HSH155YMR288W ADE3P07245 946 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W RPL1AP0CX43 217 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W RPL1BP0CX44 217 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W CLC1P17891 233 aa1.88□□□□□ -2.11
HSH155YMR288W SNT1P25357 1226 aa1.88□□□□□ -2.11
HSH155YMR288W ARP2P32381 391 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W YEL043WP32618 956 aa1.88□□□□□ -2.11
HSH155YMR288W TMT1P32643 299 aa1.88□□□□□ -2.11
HSH155YMR288W VPS17P32913 551 aa1.88□□□□□ -2.11
HSH155YMR288W FLO10P36170 1169 aa1.88□□□□□ -2.11
HSH155YMR288W AAP1P37898 856 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W ADH5P38113 351 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W UTP9P38882 575 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W LSM4P40070 187 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W SPO22P40511 975 aa1.88□□□□□ -2.11
HSH155YMR288W ULP2P40537 1034 aaPredicted RBP1.88□□□□□ -2.11
HSH155YMR288W PSA1P41940 361 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W GCN20P43535 752 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W VPS25P47142 202 aa1.88□□□□□ -2.11
HSH155YMR288W IMP4P53941 290 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W OAZ1Q02803 292 aa1.88□□□□□ -2.11
HSH155YMR288W YDR109CQ04585 715 aa1.88□□□□□ -2.11
HSH155YMR288W RSF1Q05043 376 aa1.88□□□□□ -2.11
HSH155YMR288W DON1Q05610 365 aa1.88□□□□□ -2.11
HSH155YMR288W AIM6Q07716 390 aa1.88□□□□□ -2.11
HSH155YMR288W RKM5Q12367 367 aa1.88□□□□□ -2.11
HSH155YMR288W ERG27Q12452 347 aaKnown RBP1.88□□□□□ -2.11
HSH155YMR288W YBR255C-AQ3E776 120 aa1.88□□□□□ -2.11
HSH155YMR288W PET111P08468 800 aa1.87□□□□□ -2.11
HSH155YMR288W COQ1P18900 473 aa1.87□□□□□ -2.11
HSH155YMR288W RPB4P20433 221 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W CDC15P27636 974 aa1.87□□□□□ -2.11
HSH155YMR288W LAC1P28496 418 aa1.87□□□□□ -2.11
HSH155YMR288W SLC1P33333 303 aa1.87□□□□□ -2.11
HSH155YMR288W MIA40P36046 403 aa1.87□□□□□ -2.11
HSH155YMR288W YKL023WP36103 277 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W YPT10P38146 199 aa1.87□□□□□ -2.11
HSH155YMR288W MMS4P38257 691 aa1.87□□□□□ -2.11
HSH155YMR288W VBA2P38358 474 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W WSC4P38739 605 aa1.87□□□□□ -2.11
HSH155YMR288W ARO9P38840 513 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W EXO1P39875 702 aa1.87□□□□□ -2.11
HSH155YMR288W YJL070CP40361 888 aa1.87□□□□□ -2.11
HSH155YMR288W UTP18P40362 594 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W FIS1P40515 155 aa1.87□□□□□ -2.11
HSH155YMR288W LCB2P40970 561 aa1.87□□□□□ -2.11
HSH155YMR288W TCB2P48231 1178 aa1.87□□□□□ -2.11
HSH155YMR288W BPL1P48445 690 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W TDA7P53882 636 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W YMR111CQ04461 462 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W ERB1Q04660 807 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W COQ9Q05779 260 aa1.87□□□□□ -2.11
HSH155YMR288W YLR456WQ06199 204 aa1.87□□□□□ -2.11
HSH155YMR288W CYK3Q07533 885 aa1.87□□□□□ -2.11
HSH155YMR288W YDL242WQ07746 117 aa1.87□□□□□ -2.11
HSH155YMR288W YOL024WQ08172 172 aa1.87□□□□□ -2.11
HSH155YMR288W SMC5Q08204 1093 aa1.87□□□□□ -2.11
HSH155YMR288W RTC5Q12108 567 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W MAK31P23059 88 aa1.87□□□□□ -2.11
HSH155YMR288W RSA4P25382 515 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W KRE6P32486 720 aa1.87□□□□□ -2.11
HSH155YMR288W SKG6P32900 734 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W YBR056WP38081 501 aa1.87□□□□□ -2.11
HSH155YMR288W KTR3P38130 404 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W NTC20P38302 140 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W YHR054CP38780 354 aa1.87□□□□□ -2.11
HSH155YMR288W YDR089WP38966 869 aa1.87□□□□□ -2.11
HSH155YMR288W GDI1P39958 451 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W TIF34P40217 347 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W ASG1P40467 964 aa1.87□□□□□ -2.11
HSH155YMR288W GLO1P50107 326 aa1.87□□□□□ -2.11
HSH155YMR288W YGL036WP53185 909 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W EFM5P53200 248 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W JJJ1P53863 590 aa1.87□□□□□ -2.11
HSH155YMR288W CBK1P53894 756 aa1.87□□□□□ -2.11
HSH155YMR288W RRB1Q04225 511 aaKnown RBP1.87□□□□□ -2.11
HSH155YMR288W ECM18Q04623 453 aa1.87□□□□□ -2.11
HSH155YMR288W MSC3Q05812 728 aa1.87□□□□□ -2.11
HSH155YMR288W PML1Q07930 204 aaPredicted RBP1.87□□□□□ -2.11
HSH155YMR288W AFT2Q08957 416 aa1.87□□□□□ -2.11
HSH155YMR288W NMD4Q12129 218 aa1.87□□□□□ -2.11
HSH155YMR288W LCB4Q12246 624 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms