RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YHR033WP38690 423 aa3.53□□□□□ -1.84
LCB5YLR260W MSR1P38714 643 aa3.53□□□□□ -1.84
LCB5YLR260W TCD1P38756 429 aa3.53□□□□□ -1.84
LCB5YLR260W BZZ1P38822 633 aa3.53□□□□□ -1.84
LCB5YLR260W SLZ1P40167 298 aa3.53□□□□□ -1.84
LCB5YLR260W MSS2P40990 351 aa3.53□□□□□ -1.84
LCB5YLR260W ELP2P42935 788 aa3.53□□□□□ -1.84
LCB5YLR260W PNC1P53184 216 aaKnown RBP3.53□□□□□ -1.84
LCB5YLR260W PEF1P53238 335 aa3.53□□□□□ -1.84
LCB5YLR260W INN1P53901 409 aa3.53□□□□□ -1.84
LCB5YLR260W TMN2Q04562 672 aa3.53□□□□□ -1.84
LCB5YLR260W HCR1Q05775 265 aaKnown RBP3.53□□□□□ -1.84
LCB5YLR260W VAM6Q07468 1049 aa3.53□□□□□ -1.84
LCB5YLR260W YAP7Q08182 245 aa3.53□□□□□ -1.84
LCB5YLR260W TMA16Q08687 178 aa3.53□□□□□ -1.84
LCB5YLR260W BUD7Q08754 746 aa3.53□□□□□ -1.84
LCB5YLR260W ATG29Q12092 213 aa3.53□□□□□ -1.84
LCB5YLR260W UPC2Q12151 913 aa3.53□□□□□ -1.84
LCB5YLR260W YDR061WQ12298 539 aa3.53□□□□□ -1.84
LCB5YLR260W YPT6Q99260 215 aa3.53□□□□□ -1.84
LCB5YLR260W VCX1Q99385 411 aa3.53□□□□□ -1.84
LCB5YLR260W VPS63O13549 108 aa3.53□□□□□ -1.84
LCB5YLR260W ATP2P00830 511 aaKnown RBP3.53□□□□□ -1.84
LCB5YLR260W GAL10P04397 699 aa3.53□□□□□ -1.84
LCB5YLR260W HXK2P04807 486 aaKnown RBP3.53□□□□□ -1.84
LCB5YLR260W PPH22P23595 377 aa3.53□□□□□ -1.84
LCB5YLR260W SNT1P25357 1226 aa3.53□□□□□ -1.84
LCB5YLR260W GSY2P27472 705 aa3.53□□□□□ -1.84
LCB5YLR260W SUA5P32579 426 aa3.53□□□□□ -1.84
LCB5YLR260W TKL2P33315 681 aa3.53□□□□□ -1.84
LCB5YLR260W PMT1P33775 817 aa3.53□□□□□ -1.84
LCB5YLR260W YBL055CP34220 418 aaPredicted RBP3.53□□□□□ -1.84
LCB5YLR260W YET1P35723 206 aa3.53□□□□□ -1.84
LCB5YLR260W KKQ8P36004 724 aa3.53□□□□□ -1.84
LCB5YLR260W CDS1P38221 457 aa3.53□□□□□ -1.84
LCB5YLR260W SSO2P39926 295 aa3.53□□□□□ -1.84
LCB5YLR260W EXG2P52911 562 aa3.53□□□□□ -1.84
LCB5YLR260W YGR066CP53242 292 aa3.53□□□□□ -1.84
LCB5YLR260W NOP13P53883 403 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
LCB5YLR260W MRPS17Q03246 237 aaPredicted RBP3.53□□□□□ -1.84
LCB5YLR260W EBS1Q03466 884 aaKnown RBP3.53□□□□□ -1.84
LCB5YLR260W PPN1Q04119 674 aa3.53□□□□□ -1.84
LCB5YLR260W RQC1Q05468 723 aaKnown RBP3.53□□□□□ -1.84
LCB5YLR260W GPM2Q12008 311 aa3.53□□□□□ -1.84
LCB5YLR260W ECM3Q99252 613 aa3.53□□□□□ -1.84
LCB5YLR260W BEM2P39960 2167 aaKnown RBP3.52□□□□□ -1.85
LCB5YLR260W JIP3O13555 125 aa3.52□□□□□ -1.85
LCB5YLR260W HIS5P07172 385 aa3.52□□□□□ -1.85
LCB5YLR260W FAR1P21268 830 aa3.52□□□□□ -1.85
LCB5YLR260W COQ2P32378 372 aa3.52□□□□□ -1.85
LCB5YLR260W ERG1P32476 496 aaKnown RBP3.52□□□□□ -1.85
LCB5YLR260W YME1P32795 747 aa3.52□□□□□ -1.85
LCB5YLR260W YPT7P32939 208 aa3.52□□□□□ -1.85
LCB5YLR260W FHL1P39521 936 aa3.52□□□□□ -1.85
LCB5YLR260W TMN3P40071 706 aa3.52□□□□□ -1.85
LCB5YLR260W DSE1P40077 573 aa3.52□□□□□ -1.85
LCB5YLR260W DLD2P46681 530 aaKnown RBP3.52□□□□□ -1.85
LCB5YLR260W APT1P49435 187 aaKnown RBP3.52□□□□□ -1.85
LCB5YLR260W GCN5Q03330 439 aa3.52□□□□□ -1.85
LCB5YLR260W ATC1Q04005 294 aa3.52□□□□□ -1.85
LCB5YLR260W YLR173WQ06247 608 aa3.52□□□□□ -1.85
LCB5YLR260W YOR387CQ08910 206 aa3.52□□□□□ -1.85
LCB5YLR260W YLR122CQ12312 125 aa3.52□□□□□ -1.85
LCB5YLR260W NDJ1Q12366 352 aa3.52□□□□□ -1.85
LCB5YLR260W AI5_BETAQ9ZZX0 354 aa3.52□□□□□ -1.85
LCB5YLR260W RPL22AP05749 121 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W CDC36P06100 191 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W STE3P06783 470 aa3.51□□□□□ -1.85
LCB5YLR260W SAM35P14693 329 aa3.51□□□□□ -1.85
LCB5YLR260W SNF5P18480 905 aa3.51□□□□□ -1.85
LCB5YLR260W KGD2P19262 463 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W UBA1P22515 1024 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W DAL2P25335 343 aa3.51□□□□□ -1.85
LCB5YLR260W GAC1P28006 793 aa3.51□□□□□ -1.85
LCB5YLR260W FAA1P30624 700 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W YKL070WP36087 169 aa3.51□□□□□ -1.85
LCB5YLR260W ATP3P38077 311 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W SLM4P38247 162 aa3.51□□□□□ -1.85
LCB5YLR260W MIP6P38760 659 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W MED6P38782 295 aa3.51□□□□□ -1.85
LCB5YLR260W CCT6P39079 546 aa3.51□□□□□ -1.85
LCB5YLR260W ZRG8P40021 1076 aa3.51□□□□□ -1.85
LCB5YLR260W SER3P40054 469 aa3.51□□□□□ -1.85
LCB5YLR260W MND2P40577 368 aa3.51□□□□□ -1.85
LCB5YLR260W GCD14P46959 383 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W SMC3P47037 1230 aa3.51□□□□□ -1.85
LCB5YLR260W TIM21P53220 239 aa3.51□□□□□ -1.85
LCB5YLR260W EAF7P53911 425 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W KTR6P54070 446 aa3.51□□□□□ -1.85
LCB5YLR260W MZM1Q03429 123 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W RSM28Q03430 361 aa3.51□□□□□ -1.85
LCB5YLR260W WAR1Q03631 944 aa3.51□□□□□ -1.85
LCB5YLR260W STP3Q05937 343 aa3.51□□□□□ -1.85
LCB5YLR260W CRN1Q06440 651 aa3.51□□□□□ -1.85
LCB5YLR260W NDL1Q06568 189 aa3.51□□□□□ -1.85
LCB5YLR260W XYL2Q07993 356 aa3.51□□□□□ -1.85
LCB5YLR260W RCL1Q08096 367 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W LCB4Q12246 624 aa3.51□□□□□ -1.85
LCB5YLR260W PET122P10355 254 aa3.51□□□□□ -1.85
LCB5YLR260W RPL3P14126 387 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms