RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C RKM5Q12367 367 aa10.02□□□□□ -0.81
SHM2YLR058C CAN1P04817 590 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-LR1P0C2J4 438 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-FP0CX61 438 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-GR2P0CX62 438 aa10.01□□□□□ -0.81
SHM2YLR058C MSS116P15424 664 aaKnown RBP10.01□□□□□ -0.81
SHM2YLR058C SNF5P18480 905 aa10.01□□□□□ -0.81
SHM2YLR058C SLM5P25345 492 aaKnown RBP10.01□□□□□ -0.81
SHM2YLR058C TY2A-CP25383 438 aa10.01□□□□□ -0.81
SHM2YLR058C ADE1P27616 306 aa10.01□□□□□ -0.81
SHM2YLR058C NRP1P32770 719 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
SHM2YLR058C SKN1P33336 771 aa10.01□□□□□ -0.81
SHM2YLR058C FMP46P36141 133 aaKnown RBP10.01□□□□□ -0.81
SHM2YLR058C ERV46P39727 415 aa10.01□□□□□ -0.81
SHM2YLR058C VRG4P40107 337 aa10.01□□□□□ -0.81
SHM2YLR058C JEM1P40358 645 aa10.01□□□□□ -0.81
SHM2YLR058C BIO3P50277 480 aa10.01□□□□□ -0.81
SHM2YLR058C RPM2Q02773 1202 aa10.01□□□□□ -0.81
SHM2YLR058C MMT1Q03218 510 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-DR2Q03483 438 aa10.01□□□□□ -0.81
SHM2YLR058C YMR010WQ03687 405 aa10.01□□□□□ -0.81
SHM2YLR058C ASA1Q06822 443 aa10.01□□□□□ -0.81
SHM2YLR058C GYP1Q08484 637 aa10.01□□□□□ -0.81
SHM2YLR058C GPN2Q08726 347 aaPredicted RBP10.01□□□□□ -0.81
SHM2YLR058C MUM3Q08750 479 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-BQ12260 438 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-OR2Q12293 438 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-DR1Q12392 438 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-OR1Q12439 438 aa10.01□□□□□ -0.81
SHM2YLR058C TY4A-HQ6Q5P6 413 aa10.01□□□□□ -0.81
SHM2YLR058C TY2A-DR3Q99303 438 aa10.01□□□□□ -0.81
SHM2YLR058C ARG3P05150 338 aa10□□□□□ -0.81
SHM2YLR058C BUB3P26449 341 aa10□□□□□ -0.81
SHM2YLR058C ATP7P30902 174 aa10□□□□□ -0.81
SHM2YLR058C SPO23P33757 523 aa10□□□□□ -0.81
SHM2YLR058C HES1P35843 434 aa10□□□□□ -0.81
SHM2YLR058C MAD2P40958 196 aa10□□□□□ -0.81
SHM2YLR058C GAB1P41733 394 aa10□□□□□ -0.81
SHM2YLR058C GUS1P46655 708 aaKnown RBP RIP-Chip data10□□□□□ -0.81not detected
SHM2YLR058C UPF3P48412 387 aaKnown RBP10□□□□□ -0.81
SHM2YLR058C MUP1P50276 574 aa10□□□□□ -0.81
SHM2YLR058C PSR1Q07800 427 aa10□□□□□ -0.81
SHM2YLR058C DIN7Q12086 430 aa10□□□□□ -0.81
SHM2YLR058C YPR022CQ12139 1133 aa10□□□□□ -0.81
SHM2YLR058C RUP1Q12242 671 aa10□□□□□ -0.81
SHM2YLR058C BMT6Q12291 365 aa10□□□□□ -0.81
SHM2YLR058C YDR262WQ12331 272 aa10□□□□□ -0.81
SHM2YLR058C IRA2P19158 3079 aa10□□□□□ -0.81
SHM2YLR058C RPL24AP04449 155 aaKnown RBP9.99□□□□□ -0.81
SHM2YLR058C ATP4P05626 244 aa9.99□□□□□ -0.81
SHM2YLR058C GAL7P08431 366 aa9.99□□□□□ -0.81
SHM2YLR058C RPL1AP0CX43 217 aaKnown RBP9.99□□□□□ -0.81
SHM2YLR058C RPL1BP0CX44 217 aaKnown RBP9.99□□□□□ -0.81
SHM2YLR058C RAP1P11938 827 aa9.99□□□□□ -0.81
SHM2YLR058C GCD2P12754 651 aaPredicted RBP9.99□□□□□ -0.81
SHM2YLR058C TOP3P13099 656 aa9.99□□□□□ -0.81
SHM2YLR058C AGP1P25376 633 aa9.99□□□□□ -0.81
SHM2YLR058C IDH2P28241 369 aaKnown RBP9.99□□□□□ -0.81
SHM2YLR058C PET127P32606 800 aa9.99□□□□□ -0.81
SHM2YLR058C APT2P36973 181 aa9.99□□□□□ -0.81
SHM2YLR058C RGI1P40043 161 aaPredicted RBP9.99□□□□□ -0.81
SHM2YLR058C SDT1P53078 280 aa9.99□□□□□ -0.81
SHM2YLR058C FHN1P53279 174 aa9.99□□□□□ -0.81
SHM2YLR058C VPS74Q06385 345 aa9.99□□□□□ -0.81
SHM2YLR058C NTO1Q12311 748 aa9.99□□□□□ -0.81
SHM2YLR058C RPN6Q12377 434 aa9.99□□□□□ -0.81
SHM2YLR058C SNF8Q12483 233 aa9.99□□□□□ -0.81
SHM2YLR058C RRP12Q12754 1228 aaKnown RBP9.99□□□□□ -0.81
SHM2YLR058C Q0010Q9ZZX9 128 aa9.99□□□□□ -0.81
SHM2YLR058C SYP1P25623 870 aaKnown RBP9.99□□□□□ -0.81
SHM2YLR058C CDC5P32562 705 aa9.99□□□□□ -0.81
SHM2YLR058C SEC17P32602 292 aa9.99□□□□□ -0.81
SHM2YLR058C GLG1P36143 616 aa9.99□□□□□ -0.81
SHM2YLR058C FET5P43561 622 aa9.99□□□□□ -0.81
SHM2YLR058C RAD33Q04231 177 aa9.99□□□□□ -0.81
SHM2YLR058C SWF1Q04629 336 aa9.99□□□□□ -0.81
SHM2YLR058C YOL131WQ08270 108 aa9.99□□□□□ -0.81
SHM2YLR058C YOL159CQ08300 171 aa9.99□□□□□ -0.81
SHM2YLR058C YOL107WQ12239 342 aa9.99□□□□□ -0.81
SHM2YLR058C ADF1Q2V2Q1 113 aa9.99□□□□□ -0.81
SHM2YLR058C YPR096CO13587 100 aa9.98□□□□□ -0.81
SHM2YLR058C PTP1P25044 335 aa9.98□□□□□ -0.81
SHM2YLR058C TFC1P32367 649 aa9.98□□□□□ -0.81
SHM2YLR058C SFA1P32771 386 aa9.98□□□□□ -0.81
SHM2YLR058C FAD1P38913 306 aa9.98□□□□□ -0.81
SHM2YLR058C GOR1P53839 350 aa9.98□□□□□ -0.81
SHM2YLR058C YNL033WP53964 284 aa9.98□□□□□ -0.81
SHM2YLR058C YNL019CP53975 284 aa9.98□□□□□ -0.81
SHM2YLR058C BNA5Q05979 453 aa9.98□□□□□ -0.81
SHM2YLR058C OPT2Q06593 877 aa9.98□□□□□ -0.81
SHM2YLR058C REX4Q08237 289 aa9.98□□□□□ -0.81
SHM2YLR058C RRP40Q08285 240 aaKnown RBP9.98□□□□□ -0.81
SHM2YLR058C MLH3Q12083 715 aa9.98□□□□□ -0.81
SHM2YLR058C GET4Q12125 312 aa9.98□□□□□ -0.81
SHM2YLR058C LAG2Q92325 660 aa9.98□□□□□ -0.81
SHM2YLR058C THP2O13539 261 aaKnown RBP9.97□□□□□ -0.81
SHM2YLR058C MST1P07236 462 aa9.97□□□□□ -0.81
SHM2YLR058C UNG1P12887 359 aa9.97□□□□□ -0.81
SHM2YLR058C UGA1P17649 471 aa9.97□□□□□ -0.81
SHM2YLR058C CWP1P28319 239 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms