RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA2	YKR077W	CTF3	Q12748	733 aa		4.72	□□□□□ -1.65
MSA2	YKR077W	YOL159C-A	Q3E769	90 aa		4.72	□□□□□ -1.65
MSA2	YKR077W	PPH22	P23595	377 aa		4.71	□□□□□ -1.66
MSA2	YKR077W	CLB3	P24870	427 aa		4.71	□□□□□ -1.66
MSA2	YKR077W	HXT3	P32466	567 aa	Known RBP	4.71	□□□□□ -1.66
MSA2	YKR077W	GYP6	P32806	458 aa		4.71	□□□□□ -1.66
MSA2	YKR077W	SAS3	P34218	831 aa		4.71	□□□□□ -1.66
MSA2	YKR077W	YHR218W	P38899	603 aa		4.71	□□□□□ -1.66
MSA2	YKR077W	MNP1	P53163	194 aa	Predicted RBP	4.71	□□□□□ -1.66
MSA2	YKR077W	RRD2	Q12461	358 aa		4.71	□□□□□ -1.66
MSA2	YKR077W	CPR3	P25719	182 aa		4.7	□□□□□ -1.66
MSA2	YKR077W	REC114	P32841	428 aa		4.7	□□□□□ -1.66
MSA2	YKR077W	NFU1	P32860	256 aa		4.7	□□□□□ -1.66
MSA2	YKR077W	VTC2	P43585	828 aa		4.7	□□□□□ -1.66
MSA2	YKR077W	DLD2	P46681	530 aa	Known RBP	4.7	□□□□□ -1.66
MSA2	YKR077W	YJL132W	P47014	750 aa		4.7	□□□□□ -1.66
MSA2	YKR077W	OGG1	P53397	376 aa	Predicted RBP	4.7	□□□□□ -1.66
MSA2	YKR077W	NCS2	P53923	493 aa	Predicted RBP	4.7	□□□□□ -1.66
MSA2	YKR077W	RPA49	Q01080	415 aa	Predicted RBP	4.7	□□□□□ -1.66
MSA2	YKR077W	LPD1	P09624	499 aa	Known RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	FUR1	P18562	216 aa	Known RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	YIM1	P28625	365 aa		4.69	□□□□□ -1.66
MSA2	YKR077W	NDI1	P32340	513 aa		4.69	□□□□□ -1.66
MSA2	YKR077W	YBP1	P38315	674 aa		4.69	□□□□□ -1.66
MSA2	YKR077W	NOC2	P39744	710 aa	Known RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	ISC1	P40015	477 aa	Known RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	GCD10	P41814	478 aa		4.69	□□□□□ -1.66
MSA2	YKR077W	TFG2	P41896	400 aa	Predicted RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	GPD2	P41911	440 aa	Known RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	IDP2	P41939	412 aa		4.69	□□□□□ -1.66
MSA2	YKR077W	WSC2	P53832	503 aa		4.69	□□□□□ -1.66
MSA2	YKR077W	RRG1	Q12167	365 aa	Predicted RBP	4.69	□□□□□ -1.66
MSA2	YKR077W	CLC1	P17891	233 aa		4.68	□□□□□ -1.66
MSA2	YKR077W	RNA14	P25298	677 aa	Known RBP	4.68	□□□□□ -1.66
MSA2	YKR077W	NIP100	P33420	868 aa		4.68	□□□□□ -1.66
MSA2	YKR077W	KTR5	P53966	522 aa	Predicted RBP	4.68	□□□□□ -1.66
MSA2	YKR077W	ARK1	P53974	638 aa		4.68	□□□□□ -1.66
MSA2	YKR077W	PIR3	Q03180	325 aa		4.68	□□□□□ -1.66
MSA2	YKR077W	YMR155W	Q03795	547 aa		4.68	□□□□□ -1.66
MSA2	YKR077W	GPH1	P06738	902 aa	Known RBP	4.67	□□□□□ -1.66
MSA2	YKR077W	CRM1	P30822	1084 aa	Known RBP	4.67	□□□□□ -1.66
MSA2	YKR077W	HCS1	P34243	683 aa		4.67	□□□□□ -1.66
MSA2	YKR077W	AVT4	P50944	713 aa		4.67	□□□□□ -1.66
MSA2	YKR077W	MSO1	P53604	210 aa	Known RBP	4.67	□□□□□ -1.66
MSA2	YKR077W	PNG1	Q02890	363 aa		4.67	□□□□□ -1.66
MSA2	YKR077W	YAR066W	P0CX18	203 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	YHR214W	P0CX19	203 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	YCR100C	P25606	316 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	TIF5	P38431	405 aa	Known RBP	4.66	□□□□□ -1.66
MSA2	YKR077W	CAF40	P53829	373 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	DSL1	P53847	754 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	SPC19	Q03954	165 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	SCW10	Q04951	389 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	SIL1	Q08199	421 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	YCL021W-A	Q96VH3	125 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	YLR278C	Q05854	1341 aa		4.66	□□□□□ -1.66
MSA2	YKR077W	CPR1	P14832	162 aa	Known RBP	4.65	□□□□□ -1.67
MSA2	YKR077W	PRP21	P32524	280 aa	Predicted RBP	4.65	□□□□□ -1.67
MSA2	YKR077W	GLC7	P32598	312 aa	Known RBP	4.65	□□□□□ -1.67
MSA2	YKR077W	RML2	P32611	393 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	BYE1	P36106	594 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	VHC1	P38329	1120 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	PCA1	P38360	1216 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	CCT2	P39076	527 aa	Known RBP	4.65	□□□□□ -1.67
MSA2	YKR077W	LSM5	P40089	93 aa	Known RBP	4.65	□□□□□ -1.67
MSA2	YKR077W	RRT5	P43607	289 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	TRS85	P46944	698 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	FMS1	P50264	508 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	ODC1	Q03028	310 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	HSP31	Q04432	237 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	HNT3	Q08702	217 aa		4.65	□□□□□ -1.67
MSA2	YKR077W	HIP1	P06775	603 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	RIP1	P08067	215 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	ARA1	P38115	344 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	POP6	P53218	158 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	PCP1	P53259	346 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	BOR1	P53838	576 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
MSA2	YKR077W	YLL056C	Q12177	298 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	YRF1-4	O13559	1382 aa		4.64	□□□□□ -1.67
MSA2	YKR077W	PMR1	P13586	950 aa		4.63	□□□□□ -1.67
MSA2	YKR077W	REC107	P21651	314 aa		4.63	□□□□□ -1.67
MSA2	YKR077W	MRP4	P32902	394 aa		4.63	□□□□□ -1.67
MSA2	YKR077W	YCR041W	P37265	110 aa		4.63	□□□□□ -1.67
MSA2	YKR077W	MKT1	P40850	830 aa	Known RBP	4.63	□□□□□ -1.67
MSA2	YKR077W	ART5	P53244	586 aa	Known RBP	4.63	□□□□□ -1.67
MSA2	YKR077W	YGR250C	P53316	781 aa	Known RBP	4.63	□□□□□ -1.67
MSA2	YKR077W	ARX1	Q03862	593 aa	Known RBP	4.63	□□□□□ -1.67
MSA2	YKR077W	YDR387C	Q04162	555 aa		4.63	□□□□□ -1.67
MSA2	YKR077W	RRP45	Q05636	305 aa	Known RBP	4.63	□□□□□ -1.67
MSA2	YKR077W	CBS2	P14905	389 aa		4.62	□□□□□ -1.67
MSA2	YKR077W	APE2	P32454	952 aa	Known RBP	4.62	□□□□□ -1.67
MSA2	YKR077W	ECM25	P32525	599 aa		4.62	□□□□□ -1.67
MSA2	YKR077W	YIP1	P53039	248 aa		4.62	□□□□□ -1.67
MSA2	YKR077W	RPI1	P23250	407 aa	Known RBP	4.61	□□□□□ -1.67
MSA2	YKR077W	AVT5	P38176	459 aa		4.61	□□□□□ -1.67
MSA2	YKR077W	NTC20	P38302	140 aa	Predicted RBP	4.61	□□□□□ -1.67
MSA2	YKR077W	SSU1	P41930	458 aa		4.61	□□□□□ -1.67
MSA2	YKR077W	MRP51	Q02950	344 aa		4.61	□□□□□ -1.67
MSA2	YKR077W	TLG2	Q08144	397 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms