RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	MPS3	P47069	682 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	NPA3	P47122	385 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	CTH1	P47976	325 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	TIM21	P53220	239 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	GTF1	P53260	183 aa	Predicted RBP	4.88	□□□□□ -1.63
SIS2	YKR072C	SLU7	Q02775	382 aa	Known RBP	4.88	□□□□□ -1.63
SIS2	YKR072C	SRL4	Q03085	281 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	GPN3	Q06543	272 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	IPK1	Q06667	281 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	YPL216W	Q08964	1102 aa		4.88	□□□□□ -1.63
SIS2	YKR072C	IRC20	Q06554	1556 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	PEP5	P12868	1029 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	THR4	P16120	514 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	CNE1	P27825	502 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	ARO4	P32449	370 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	PRS1	P32895	427 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	KAP104	P38217	918 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	ERG7	P38604	731 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	ECM10	P39987	644 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	FMC1	P40491	155 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	ROG1	P53118	685 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	YNL247W	P53852	767 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	ADE16	P54113	591 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	RGC1	Q06108	1083 aa	Known RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	RKM1	Q08961	583 aa	Predicted RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	MRH1	Q12117	320 aa	Predicted RBP	4.87	□□□□□ -1.63
SIS2	YKR072C	ATG9	Q12142	997 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	TY1B-BR	Q12193	1756 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	TY1B-GR3	Q12316	1755 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	TY1B-OR	Q92393	1755 aa		4.87	□□□□□ -1.63
SIS2	YKR072C	ARG4	P04076	463 aa	Predicted RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	RHO2	P06781	192 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	CDC20	P26309	610 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	GAC1	P28006	793 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	SPR1	P32603	445 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YKL023W	P36103	277 aa	Known RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	OLA1	P38219	394 aa	Known RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	YHR210C	P38893	341 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	OTU1	P43558	301 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YGL108C	P53139	140 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YNL146W	P53906	100 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	RSN1	Q03516	953 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	PLB2	Q03674	706 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	COQ9	Q05779	260 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	DIB1	Q06819	143 aa	Predicted RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	CYK3	Q07533	885 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YDL242W	Q07746	117 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	NRT1	Q08485	598 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	FMP16	Q12497	93 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	LAM4	P38800	1345 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	IKI3	Q06706	1349 aa	Known RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	PET111	P08468	800 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	ELO2	P25358	347 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YCR016W	P25617	290 aa	Known RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	KRE2	P27809	442 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	LAC1	P28496	418 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	STV1	P37296	890 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	CTP1	P38152	299 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	VHC1	P38329	1120 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	CIN4	P39110	191 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YIR042C	P40586	236 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	BNA6	P43619	295 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	ATG27	P46989	271 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	UFO1	Q04511	668 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YMR310C	Q04867	317 aa	Predicted RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	POS5	Q06892	414 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	TEN1	Q07921	160 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	YOR012W	Q12351	137 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	NPC2	Q12408	173 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	APC2	Q12440	853 aa		4.86	□□□□□ -1.63
SIS2	YKR072C	CFT1	Q06632	1357 aa	Known RBP	4.86	□□□□□ -1.63
SIS2	YKR072C	RPO31	P04051	1460 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	GEA2	P39993	1459 aa	Known RBP	4.85	□□□□□ -1.63
SIS2	YKR072C	RTC1	Q08281	1341 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	AI3	P03877	415 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	AAC1	P04710	309 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	PCT1	P13259	424 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	PSO2	P30620	661 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	PRO3	P32263	286 aa	Known RBP	4.85	□□□□□ -1.63
SIS2	YKR072C	CYM1	P32898	989 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	RPL32	P38061	130 aa	Known RBP	4.85	□□□□□ -1.63
SIS2	YKR072C	PCA1	P38360	1216 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	SKN7	P38889	622 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	YHB1	P39676	399 aa	Known RBP	4.85	□□□□□ -1.63
SIS2	YKR072C	PHM8	P40025	321 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	LOH1	P47055	219 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	AMA1	P50082	593 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	DSL1	P53847	754 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	STD1	Q02794	444 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	RXT3	Q07458	294 aa		4.85	□□□□□ -1.63
SIS2	YKR072C	TY2B-LR1	P0C2J3	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-F	P0CX63	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-GR2	P0CX64	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-C	P25384	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-DR2	Q03494	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY1B-DR1	Q03855	1755 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-OR1	Q12113	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-DR1	Q12472	1770 aa		4.84	□□□□□ -1.63
SIS2	YKR072C	TY2B-OR2	Q12501	1770 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms