RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YJL213WP40896 331 aa2.4□□□□□ -2.03
PEP8YJL053W YGR149WP48236 432 aa2.4□□□□□ -2.03
PEP8YJL053W NCS2P53923 493 aaPredicted RBP2.4□□□□□ -2.03
PEP8YJL053W SLG1P54867 378 aa2.4□□□□□ -2.03
PEP8YJL053W RLI1Q03195 608 aaKnown RBP2.4□□□□□ -2.03
PEP8YJL053W RPL15AP05748 204 aaKnown RBP2.39□□□□□ -2.03
PEP8YJL053W GPH1P06738 902 aaKnown RBP2.39□□□□□ -2.03
PEP8YJL053W MRS3P10566 314 aa2.39□□□□□ -2.03
PEP8YJL053W IDH2P28241 369 aaKnown RBP2.39□□□□□ -2.03
PEP8YJL053W ATP11P32453 318 aa2.39□□□□□ -2.03
PEP8YJL053W RPH1P39956 796 aa2.39□□□□□ -2.03
PEP8YJL053W FAU1P40099 211 aa2.39□□□□□ -2.03
PEP8YJL053W GPD2P41911 440 aaKnown RBP2.39□□□□□ -2.03
PEP8YJL053W DLD2P46681 530 aaKnown RBP2.39□□□□□ -2.03
PEP8YJL053W GWT1P47026 490 aa2.39□□□□□ -2.03
PEP8YJL053W FMS1P50264 508 aa2.39□□□□□ -2.03
PEP8YJL053W OGG1P53397 376 aaPredicted RBP2.39□□□□□ -2.03
PEP8YJL053W DSL1P53847 754 aa2.39□□□□□ -2.03
PEP8YJL053W KEL3Q08979 651 aaPredicted RBP2.39□□□□□ -2.03
PEP8YJL053W RRG1Q12167 365 aaPredicted RBP2.39□□□□□ -2.03
PEP8YJL053W YRF1-4O13559 1382 aa2.38□□□□□ -2.03
PEP8YJL053W YAR066WP0CX18 203 aa2.38□□□□□ -2.03
PEP8YJL053W YHR214WP0CX19 203 aa2.38□□□□□ -2.03
PEP8YJL053W SRV2P17555 526 aaKnown RBP2.38□□□□□ -2.03
PEP8YJL053W PUT3P25502 979 aaPredicted RBP2.38□□□□□ -2.03
PEP8YJL053W HXT3P32466 567 aaKnown RBP2.38□□□□□ -2.03
PEP8YJL053W SAS3P34218 831 aa2.38□□□□□ -2.03
PEP8YJL053W PMU1P36069 295 aa2.38□□□□□ -2.03
PEP8YJL053W TUL1P36096 758 aa2.38□□□□□ -2.03
PEP8YJL053W BYE1P36106 594 aa2.38□□□□□ -2.03
PEP8YJL053W ARA1P38115 344 aa2.38□□□□□ -2.03
PEP8YJL053W NTC20P38302 140 aaPredicted RBP2.38□□□□□ -2.03
PEP8YJL053W MTC4P38335 694 aaKnown RBP2.38□□□□□ -2.03
PEP8YJL053W SYG1P40528 902 aa2.38□□□□□ -2.03
PEP8YJL053W SSU1P41930 458 aa2.38□□□□□ -2.03
PEP8YJL053W YJL132WP47014 750 aa2.38□□□□□ -2.03
PEP8YJL053W YDL186WP48568 277 aa2.38□□□□□ -2.03
PEP8YJL053W RRP45Q05636 305 aaKnown RBP2.38□□□□□ -2.03
PEP8YJL053W HSP42Q12329 375 aa2.38□□□□□ -2.03
PEP8YJL053W LPD1P09624 499 aaKnown RBP2.37□□□□□ -2.03
PEP8YJL053W ATP10P18496 279 aa2.37□□□□□ -2.03
PEP8YJL053W PPH22P23595 377 aa2.37□□□□□ -2.03
PEP8YJL053W BUB3P26449 341 aa2.37□□□□□ -2.03
PEP8YJL053W FUN19P28003 413 aaPredicted RBP2.37□□□□□ -2.03
PEP8YJL053W NIP100P33420 868 aa2.37□□□□□ -2.03
PEP8YJL053W FRE2P36033 711 aa2.37□□□□□ -2.03
PEP8YJL053W VHC1P38329 1120 aa2.37□□□□□ -2.03
PEP8YJL053W RPR2P40571 144 aa2.37□□□□□ -2.03
PEP8YJL053W SPG5P42933 373 aa2.37□□□□□ -2.03
PEP8YJL053W YFR016CP43597 1233 aaKnown RBP2.37□□□□□ -2.03
PEP8YJL053W SSN8P47821 323 aa2.37□□□□□ -2.03
PEP8YJL053W CAF40P53829 373 aa2.37□□□□□ -2.03
PEP8YJL053W RPA49Q01080 415 aaPredicted RBP2.37□□□□□ -2.03
PEP8YJL053W PNG1Q02890 363 aa2.37□□□□□ -2.03
PEP8YJL053W YMR155WQ03795 547 aa2.37□□□□□ -2.03
PEP8YJL053W TAP42Q04372 366 aa2.37□□□□□ -2.03
PEP8YJL053W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
PEP8YJL053W AYT1Q12226 474 aa2.37□□□□□ -2.03
PEP8YJL053W PGA3Q12746 312 aaKnown RBP2.37□□□□□ -2.03
PEP8YJL053W HIS4P00815 799 aaKnown RBP2.36□□□□□ -2.03
PEP8YJL053W GDH1P07262 454 aaKnown RBP2.36□□□□□ -2.03
PEP8YJL053W YIM1P28625 365 aa2.36□□□□□ -2.03
PEP8YJL053W DBF4P32325 704 aa2.36□□□□□ -2.03
PEP8YJL053W NDI1P32340 513 aa2.36□□□□□ -2.03
PEP8YJL053W HAT2P39984 401 aa2.36□□□□□ -2.03
PEP8YJL053W ISC1P40015 477 aaKnown RBP2.36□□□□□ -2.03
PEP8YJL053W TFG2P41896 400 aaPredicted RBP2.36□□□□□ -2.03
PEP8YJL053W YGL138CP53122 345 aa2.36□□□□□ -2.03
PEP8YJL053W HSP31Q04432 237 aa2.36□□□□□ -2.03
PEP8YJL053W MUM3Q08750 479 aa2.36□□□□□ -2.03
PEP8YJL053W YOL159C-AQ3E769 90 aa2.36□□□□□ -2.03
PEP8YJL053W YLR278CQ05854 1341 aa2.36□□□□□ -2.03
PEP8YJL053W MCK1P21965 375 aaKnown RBP2.35□□□□□ -2.03
PEP8YJL053W RPI1P23250 407 aaKnown RBP2.35□□□□□ -2.03
PEP8YJL053W YCR051WP25631 222 aa2.35□□□□□ -2.03
PEP8YJL053W ATS1P31386 333 aa2.35□□□□□ -2.03
PEP8YJL053W APE2P32454 952 aaKnown RBP2.35□□□□□ -2.03
PEP8YJL053W LOS1P33418 1100 aaPredicted RBP2.35□□□□□ -2.03
PEP8YJL053W THI2P38141 450 aa2.35□□□□□ -2.03
PEP8YJL053W YHR054CP38780 354 aa2.35□□□□□ -2.03
PEP8YJL053W LSM5P40089 93 aaKnown RBP2.35□□□□□ -2.03
PEP8YJL053W ECM27P47144 725 aa2.35□□□□□ -2.03
PEP8YJL053W COS10P52924 374 aa2.35□□□□□ -2.03
PEP8YJL053W POP6P53218 158 aa2.35□□□□□ -2.03
PEP8YJL053W KAP120Q02932 1032 aa2.35□□□□□ -2.03
PEP8YJL053W MRP51Q02950 344 aa2.35□□□□□ -2.03
PEP8YJL053W PIR3Q03180 325 aa2.35□□□□□ -2.03
PEP8YJL053W DON1Q05610 365 aa2.35□□□□□ -2.03
PEP8YJL053W SIL1Q08199 421 aa2.35□□□□□ -2.03
PEP8YJL053W RKM5Q12367 367 aa2.35□□□□□ -2.03
PEP8YJL053W HEM2P05373 342 aa2.34□□□□□ -2.03
PEP8YJL053W RIP1P08067 215 aa2.34□□□□□ -2.03
PEP8YJL053W CPR1P14832 162 aaKnown RBP2.34□□□□□ -2.03
PEP8YJL053W PDX1P16451 410 aa2.34□□□□□ -2.03
PEP8YJL053W YCR100CP25606 316 aa2.34□□□□□ -2.03
PEP8YJL053W AGA1P32323 725 aa2.34□□□□□ -2.03
PEP8YJL053W ECM25P32525 599 aa2.34□□□□□ -2.03
PEP8YJL053W RML2P32611 393 aa2.34□□□□□ -2.03
PEP8YJL053W TFB1P32776 642 aa2.34□□□□□ -2.03
PEP8YJL053W YME2P32843 850 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms