RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W HIS1P00498 297 aaKnown RBP6.88□□□□□ -1.31
SNF4YGL115W NSP1P14907 823 aaKnown RBP6.88□□□□□ -1.31
SNF4YGL115W DBF2P22204 572 aa6.88□□□□□ -1.31
SNF4YGL115W SPT14P32363 452 aa6.88□□□□□ -1.31
SNF4YGL115W MRS6P32864 603 aaKnown RBP6.88□□□□□ -1.31
SNF4YGL115W TAT1P38085 619 aa6.88□□□□□ -1.31
SNF4YGL115W SRP72P38688 640 aaKnown RBP6.88□□□□□ -1.31
SNF4YGL115W ATG7P38862 630 aa6.88□□□□□ -1.31
SNF4YGL115W ERV46P39727 415 aa6.88□□□□□ -1.31
SNF4YGL115W GYP8P43570 497 aa6.88□□□□□ -1.31
SNF4YGL115W PTR3P43606 678 aa6.88□□□□□ -1.31
SNF4YGL115W DLD2P46681 530 aaKnown RBP6.88□□□□□ -1.31
SNF4YGL115W SNG1P46950 547 aa6.88□□□□□ -1.31
SNF4YGL115W MET13P53128 600 aa6.88□□□□□ -1.31
SNF4YGL115W CPR8P53728 308 aa6.88□□□□□ -1.31
SNF4YGL115W MSC2Q03455 724 aa6.88□□□□□ -1.31
SNF4YGL115W THP1Q08231 455 aa6.88□□□□□ -1.31
SNF4YGL115W DNL4Q08387 944 aaPredicted RBP6.88□□□□□ -1.31
SNF4YGL115W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
SNF4YGL115W SAM4Q08985 325 aaKnown RBP6.88□□□□□ -1.31
SNF4YGL115W YOR022CQ12204 715 aa6.88□□□□□ -1.31
SNF4YGL115W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
SNF4YGL115W SPT3P06844 337 aa6.87□□□□□ -1.31
SNF4YGL115W SEC53P07283 254 aaKnown RBP6.87□□□□□ -1.31
SNF4YGL115W CIT2P08679 460 aa6.87□□□□□ -1.31
SNF4YGL115W YAP1P19880 650 aaKnown RBP6.87□□□□□ -1.31
SNF4YGL115W OCA4P25366 362 aa6.87□□□□□ -1.31
SNF4YGL115W RHB1P25378 209 aa6.87□□□□□ -1.31
SNF4YGL115W MSS51P32335 436 aa6.87□□□□□ -1.31
SNF4YGL115W MEI5P32489 222 aa6.87□□□□□ -1.31
SNF4YGL115W CDC5P32562 705 aa6.87□□□□□ -1.31
SNF4YGL115W MAK5P38112 773 aaPredicted RBP6.87□□□□□ -1.31
SNF4YGL115W YBR242WP38331 238 aa6.87□□□□□ -1.31
SNF4YGL115W RGI1P40043 161 aaPredicted RBP6.87□□□□□ -1.31
SNF4YGL115W GAB1P41733 394 aa6.87□□□□□ -1.31
SNF4YGL115W ALR2P43553 858 aa6.87□□□□□ -1.31
SNF4YGL115W BST1P43571 1029 aa6.87□□□□□ -1.31
SNF4YGL115W MET12P46151 657 aa6.87□□□□□ -1.31
SNF4YGL115W GTO1P48239 356 aa6.87□□□□□ -1.31
SNF4YGL115W STR3P53101 465 aaKnown RBP6.87□□□□□ -1.31
SNF4YGL115W SHY1P53266 389 aa6.87□□□□□ -1.31
SNF4YGL115W RBG2P53295 368 aaKnown RBP6.87□□□□□ -1.31
SNF4YGL115W SNF12P53628 566 aa6.87□□□□□ -1.31
SNF4YGL115W EFM6P53970 246 aa6.87□□□□□ -1.31
SNF4YGL115W RSC4Q02206 625 aa6.87□□□□□ -1.31
SNF4YGL115W NUP100Q02629 959 aa6.87□□□□□ -1.31
SNF4YGL115W RRN5Q02983 363 aa6.87□□□□□ -1.31
SNF4YGL115W GOT1Q03554 138 aa6.87□□□□□ -1.31
SNF4YGL115W TAF12Q03761 539 aa6.87□□□□□ -1.31
SNF4YGL115W RCO1Q04779 684 aa6.87□□□□□ -1.31
SNF4YGL115W HRD3Q05787 833 aa6.87□□□□□ -1.31
SNF4YGL115W RIF2Q06208 395 aa6.87□□□□□ -1.31
SNF4YGL115W TRE2Q08693 809 aa6.87□□□□□ -1.31
SNF4YGL115W DDC1Q08949 612 aa6.87□□□□□ -1.31
SNF4YGL115W SLF1Q12034 447 aaKnown RBP6.87□□□□□ -1.31
SNF4YGL115W MRH1Q12117 320 aaPredicted RBP6.87□□□□□ -1.31
SNF4YGL115W YGK3Q12222 375 aaPredicted RBP6.87□□□□□ -1.31
SNF4YGL115W GLE1Q12315 538 aa6.87□□□□□ -1.31
SNF4YGL115W LSO1Q3E827 93 aa6.87□□□□□ -1.31
SNF4YGL115W HXK2P04807 486 aaKnown RBP6.86□□□□□ -1.31
SNF4YGL115W ARG81P05085 880 aa6.86□□□□□ -1.31
SNF4YGL115W HMG1P12683 1054 aa6.86□□□□□ -1.31
SNF4YGL115W GAL3P13045 520 aa6.86□□□□□ -1.31
SNF4YGL115W CAP2P13517 287 aa6.86□□□□□ -1.31
SNF4YGL115W CLN1P20437 546 aa6.86□□□□□ -1.31
SNF4YGL115W SBA1P28707 216 aaKnown RBP6.86□□□□□ -1.31
SNF4YGL115W YKL063CP35725 167 aa6.86□□□□□ -1.31
SNF4YGL115W BAP2P38084 609 aa6.86□□□□□ -1.31
SNF4YGL115W POL12P38121 705 aaPredicted RBP6.86□□□□□ -1.31
SNF4YGL115W FLR1P38124 548 aa6.86□□□□□ -1.31
SNF4YGL115W LDH1P38139 375 aa6.86□□□□□ -1.31
SNF4YGL115W YHL041WP38730 149 aa6.86□□□□□ -1.31
SNF4YGL115W RIM4P38741 713 aa6.86□□□□□ -1.31
SNF4YGL115W YHK8P38776 514 aa6.86□□□□□ -1.31
SNF4YGL115W IST3P40565 148 aaPredicted RBP6.86□□□□□ -1.31
SNF4YGL115W DIE2P50076 525 aa6.86□□□□□ -1.31
SNF4YGL115W IMP4P53941 290 aaKnown RBP6.86□□□□□ -1.31
SNF4YGL115W MUK1Q02866 612 aa6.86□□□□□ -1.31
SNF4YGL115W YHC1Q05900 231 aaKnown RBP6.86□□□□□ -1.31
SNF4YGL115W DBP9Q06218 594 aaKnown RBP6.86□□□□□ -1.31
SNF4YGL115W PGC1Q08959 321 aa6.86□□□□□ -1.31
SNF4YGL115W ATG29Q12092 213 aa6.86□□□□□ -1.31
SNF4YGL115W ACF2Q12168 779 aa6.86□□□□□ -1.31
SNF4YGL115W RPN6Q12377 434 aa6.86□□□□□ -1.31
SNF4YGL115W ARP7Q12406 477 aa6.86□□□□□ -1.31
SNF4YGL115W PNS1Q12412 539 aa6.86□□□□□ -1.31
SNF4YGL115W AFI1Q99222 893 aa6.86□□□□□ -1.31
SNF4YGL115W ADE4P04046 510 aaKnown RBP6.85□□□□□ -1.31
SNF4YGL115W MAS2P11914 482 aa6.85□□□□□ -1.31
SNF4YGL115W SEN2P16658 377 aa6.85□□□□□ -1.31
SNF4YGL115W DAP2P18962 818 aa6.85□□□□□ -1.31
SNF4YGL115W RAD27P26793 382 aa6.85□□□□□ -1.31
SNF4YGL115W YJU2P28320 278 aaPredicted RBP6.85□□□□□ -1.31
SNF4YGL115W MF(ALPHA)2P32435 120 aa6.85□□□□□ -1.31
SNF4YGL115W PPQ1P32945 549 aa6.85□□□□□ -1.31
SNF4YGL115W KSP1P38691 1029 aaKnown RBP6.85□□□□□ -1.31
SNF4YGL115W IPI1P38803 334 aaPredicted RBP6.85□□□□□ -1.31
SNF4YGL115W YHR219WP38900 624 aa6.85□□□□□ -1.31
SNF4YGL115W CCT6P39079 546 aa6.85□□□□□ -1.31
SNF4YGL115W RPH1P39956 796 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms