RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C IBD2P53892 351 aa3.95□□□□□ -1.78
TCA17YEL048C PNG1Q02890 363 aa3.95□□□□□ -1.78
TCA17YEL048C ELP3Q02908 557 aaKnown RBP3.95□□□□□ -1.78
TCA17YEL048C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
TCA17YEL048C THP3Q12049 470 aaKnown RBP3.95□□□□□ -1.78
TCA17YEL048C SUP35P05453 685 aaKnown RBP3.94□□□□□ -1.78
TCA17YEL048C YGR210CP42942 411 aa3.94□□□□□ -1.78
TCA17YEL048C RRT5P43607 289 aa3.94□□□□□ -1.78
TCA17YEL048C YGL108CP53139 140 aa3.94□□□□□ -1.78
TCA17YEL048C ART5P53244 586 aaKnown RBP3.94□□□□□ -1.78
TCA17YEL048C ARE2P53629 642 aaKnown RBP3.94□□□□□ -1.78
TCA17YEL048C GOR1P53839 350 aa3.94□□□□□ -1.78
TCA17YEL048C ODC1Q03028 310 aa3.94□□□□□ -1.78
TCA17YEL048C YLR108CQ12259 485 aa3.94□□□□□ -1.78
TCA17YEL048C ERV2Q12284 196 aa3.94□□□□□ -1.78
TCA17YEL048C RHO2P06781 192 aa3.93□□□□□ -1.78
TCA17YEL048C CPR4P25334 318 aa3.93□□□□□ -1.78
TCA17YEL048C ARO2P28777 376 aaKnown RBP3.93□□□□□ -1.78
TCA17YEL048C IMP2'P32351 346 aa3.93□□□□□ -1.78
TCA17YEL048C REC114P32841 428 aa3.93□□□□□ -1.78
TCA17YEL048C SDH3P33421 198 aa3.93□□□□□ -1.78
TCA17YEL048C CMC1P36064 111 aa3.93□□□□□ -1.78
TCA17YEL048C RFS1P38234 210 aaKnown RBP3.93□□□□□ -1.78
TCA17YEL048C KEL1P38853 1164 aaKnown RBP3.93□□□□□ -1.78
TCA17YEL048C YEL057CP39983 233 aa3.93□□□□□ -1.78
TCA17YEL048C PRE5P40302 234 aaKnown RBP3.93□□□□□ -1.78
TCA17YEL048C WWM1P43582 211 aaKnown RBP3.93□□□□□ -1.78
TCA17YEL048C NCS2P53923 493 aaPredicted RBP3.93□□□□□ -1.78
TCA17YEL048C MUM3Q08750 479 aa3.93□□□□□ -1.78
TCA17YEL048C ATG29Q12092 213 aa3.93□□□□□ -1.78
TCA17YEL048C MET8P15807 274 aa3.92□□□□□ -1.78
TCA17YEL048C RAD14P28519 371 aa3.92□□□□□ -1.78
TCA17YEL048C AFG1P32317 509 aa3.92□□□□□ -1.78
TCA17YEL048C SPO22P40511 975 aa3.92□□□□□ -1.78
TCA17YEL048C SDT1P53078 280 aa3.92□□□□□ -1.78
TCA17YEL048C SAM1P10659 382 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C SAM2P19358 384 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C GYP6P32806 458 aa3.91□□□□□ -1.78
TCA17YEL048C VID24P38263 362 aa3.91□□□□□ -1.78
TCA17YEL048C YMR147WP40218 223 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C ARF3P40994 183 aaRIP-Chip data3.91□□□□□ -1.78not detected
TCA17YEL048C RMD9P53140 646 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C MRP51Q02950 344 aa3.91□□□□□ -1.78
TCA17YEL048C MRD1Q06106 887 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C IMH1Q06704 911 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C TSR1Q07381 788 aaKnown RBP3.91□□□□□ -1.78
TCA17YEL048C ATP10P18496 279 aa3.9□□□□□ -1.79
TCA17YEL048C IDH2P28241 369 aaKnown RBP3.9□□□□□ -1.79
TCA17YEL048C YIM1P28625 365 aa3.9□□□□□ -1.79
TCA17YEL048C PMT1P33775 817 aa3.9□□□□□ -1.79
TCA17YEL048C PTH1P38876 190 aaKnown RBP3.9□□□□□ -1.79
TCA17YEL048C FAA2P39518 744 aa3.9□□□□□ -1.79
TCA17YEL048C HXT14P42833 540 aa3.9□□□□□ -1.79
TCA17YEL048C SSN8P47821 323 aa3.9□□□□□ -1.79
TCA17YEL048C YGR149WP48236 432 aa3.9□□□□□ -1.79
TCA17YEL048C TOF1P53840 1238 aa3.9□□□□□ -1.79
TCA17YEL048C DSL1P53847 754 aa3.9□□□□□ -1.79
TCA17YEL048C RIM20Q12033 661 aa3.9□□□□□ -1.79
TCA17YEL048C SPS22P25380 463 aa3.89□□□□□ -1.79
TCA17YEL048C SPB1P25582 841 aaPredicted RBP3.89□□□□□ -1.79
TCA17YEL048C SEC66P33754 206 aa3.89□□□□□ -1.79
TCA17YEL048C YCR041WP37265 110 aa3.89□□□□□ -1.79
TCA17YEL048C THI2P38141 450 aa3.89□□□□□ -1.79
TCA17YEL048C DED81P38707 554 aaKnown RBP3.89□□□□□ -1.79
TCA17YEL048C NAB3P38996 802 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
TCA17YEL048C RRG7Q08774 242 aaPredicted RBP3.89□□□□□ -1.79
TCA17YEL048C TMS1Q12116 473 aa3.89□□□□□ -1.79
TCA17YEL048C ARG3P05150 338 aa3.88□□□□□ -1.79
TCA17YEL048C STB6P36085 766 aa3.88□□□□□ -1.79
TCA17YEL048C MIX23P38162 196 aa3.88□□□□□ -1.79
TCA17YEL048C OST1P41543 476 aaKnown RBP3.88□□□□□ -1.79
TCA17YEL048C TRS85P46944 698 aa3.88□□□□□ -1.79
TCA17YEL048C PCP1P53259 346 aa3.88□□□□□ -1.79
TCA17YEL048C VPS72Q03388 795 aa3.88□□□□□ -1.79
TCA17YEL048C YDL121CQ07541 149 aa3.88□□□□□ -1.79
TCA17YEL048C GPI10P30777 616 aa3.87□□□□□ -1.79
TCA17YEL048C RIB5P38145 238 aa3.87□□□□□ -1.79
TCA17YEL048C RRT2P38332 387 aa3.87□□□□□ -1.79
TCA17YEL048C REE1P40893 198 aa3.87□□□□□ -1.79
TCA17YEL048C NCA3P46955 337 aa3.87□□□□□ -1.79
TCA17YEL048C YIP1P53039 248 aa3.87□□□□□ -1.79
TCA17YEL048C MDG1P53885 366 aa3.87□□□□□ -1.79
TCA17YEL048C TIM10P87108 93 aa3.87□□□□□ -1.79
TCA17YEL048C GIR2Q03768 265 aaPredicted RBP3.87□□□□□ -1.79
TCA17YEL048C TAP42Q04372 366 aa3.87□□□□□ -1.79
TCA17YEL048C SPS4P09937 338 aa3.86□□□□□ -1.79
TCA17YEL048C UTP9P38882 575 aaKnown RBP3.86□□□□□ -1.79
TCA17YEL048C MST28P39552 234 aa3.86□□□□□ -1.79
TCA17YEL048C MET18P40469 1032 aa3.86□□□□□ -1.79
TCA17YEL048C LAM5P43560 674 aa3.86□□□□□ -1.79
TCA17YEL048C RQC1Q05468 723 aaKnown RBP3.86□□□□□ -1.79
TCA17YEL048C TMC1Q08422 150 aaPredicted RBP3.86□□□□□ -1.79
TCA17YEL048C MED1Q12321 566 aa3.86□□□□□ -1.79
TCA17YEL048C HRT3Q12347 344 aa3.86□□□□□ -1.79
TCA17YEL048C CLN3P13365 580 aa3.85□□□□□ -1.79
TCA17YEL048C TFG2P41896 400 aaPredicted RBP3.85□□□□□ -1.79
TCA17YEL048C VTC2P43585 828 aa3.85□□□□□ -1.79
TCA17YEL048C YGL039WP53183 348 aaKnown RBP3.85□□□□□ -1.79
TCA17YEL048C YDR387CQ04162 555 aa3.85□□□□□ -1.79
TCA17YEL048C HSP31Q04432 237 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 115.9 ms