RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS3	YDR495C	KAP104	P38217	918 aa	Known RBP	2.99	□□□□□ -1.93
VPS3	YDR495C	GPI16	P38875	610 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	RCY1	P39531	840 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YJL118W	P47022	219 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YNL146W	P53906	100 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	GPN3	Q06543	272 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	NDL1	Q06568	189 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YPR078C	Q06813	372 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	GEP3	Q08622	556 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	BAG7	Q12128	409 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	TRM11	Q12463	433 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	DCP1	Q12517	231 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS3	YDR495C	AMD2	P22580	549 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YCR016W	P25617	290 aa	Known RBP	2.99	□□□□□ -1.93
VPS3	YDR495C	CNE1	P27825	502 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YPS1	P32329	569 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	IMP3	P32899	183 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS3	YDR495C	ECM10	P39987	644 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YRB2	P40517	327 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	TOS3	P43637	560 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YGL108C	P53139	140 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YDR541C	Q03049	344 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	RSN1	Q03516	953 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	YMR310C	Q04867	317 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS3	YDR495C	IPK1	Q06667	281 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	CYK3	Q07533	885 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	RKM1	Q08961	583 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS3	YDR495C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
VPS3	YDR495C	NPC2	Q12408	173 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	APC2	Q12440	853 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	SPO24	Q3E752	67 aa		2.99	□□□□□ -1.93
VPS3	YDR495C	COX3	P00420	269 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	HIS5	P07172	385 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	HXT2	P23585	541 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	HES1	P35843	434 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	RPL32	P38061	130 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	VHC1	P38329	1120 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	YHR210C	P38893	341 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	PLB1	P39105	664 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	TAX4	P47030	604 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	KTR6	P54070	446 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	YDL242W	Q07746	117 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	ZPS1	Q12512	249 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	SRN2	Q99176	213 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	COR1	P07256	457 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	YUR1	P26725	428 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	LAC1	P28496	418 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	PSO2	P30620	661 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	MET22	P32179	357 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	SNU114	P36048	1008 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	RPF2	P36160	344 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	YHR182W	P38870	785 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	RIX1	P38883	763 aa	Predicted RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	UIP3	P39547	235 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	IST1	P53843	298 aa	Predicted RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	PEX27	Q08580	376 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	RPL24A	P04449	155 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	NFT1	P0CE68	1218 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	PCT1	P13259	424 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	SAR1	P20606	190 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	RHB1	P25378	209 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	HXT1	P32465	570 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	YKL071W	P36086	256 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	GMH1	P36125	273 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	ADE17	P38009	592 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	ICP55	P40051	511 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	ATM1	P40416	690 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	ATG27	P46989	271 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	APC4	Q04601	652 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	CTS2	Q06350	511 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	YPL216W	Q08964	1102 aa		2.98	□□□□□ -1.93
VPS3	YDR495C	PKH2	Q12236	1081 aa	Known RBP	2.98	□□□□□ -1.93
VPS3	YDR495C	DNF1	P32660	1571 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	PET111	P08468	800 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	APA2	P22108	325 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	FUB1	P25659	250 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	GSY2	P27472	705 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	ITR1	P30605	584 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	YSC83	P32792	385 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	ECT1	P33412	323 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	PPS1	P38148	807 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	ANS1	P38832	159 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	SPC97	P38863	823 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	YHR177W	P38867	453 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	BAP3	P41815	604 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	OTU1	P43558	301 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	ESBP6	P53918	673 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	RLI1	Q03195	608 aa	Known RBP	2.97	□□□□□ -1.93
VPS3	YDR495C	POS5	Q06892	414 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	YDL057W	Q07379	328 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	PAA1	Q12447	191 aa	Known RBP	2.97	□□□□□ -1.93
VPS3	YDR495C	RRP12	Q12754	1228 aa	Known RBP	2.97	□□□□□ -1.93
VPS3	YDR495C	PEP5	P12868	1029 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	THR4	P16120	514 aa	Known RBP	2.97	□□□□□ -1.93
VPS3	YDR495C	SPE2	P21182	396 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	CYM1	P32898	989 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	RPC34	P32910	317 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	CTP1	P38152	299 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	MBB1	P39534	108 aa		2.97	□□□□□ -1.93
VPS3	YDR495C	PRP39	P39682	629 aa	Known RBP	2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 254.7 ms