RNA–Protein interactions for RNA: YDR244W

PEX5, Transcript of Peroxisomal membrane signal receptor for peroxisomal matrix proteins, yeast

Gene PEX5, Length 1,839 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX5	YDR244W	SCO2	P38072	301 aa		3	□□□□□ -1.93
PEX5	YDR244W	YMR124W	P39523	943 aa	Known RBP	3	□□□□□ -1.93
PEX5	YDR244W	PES4	P39684	611 aa		3	□□□□□ -1.93
PEX5	YDR244W	FET5	P43561	622 aa		3	□□□□□ -1.93
PEX5	YDR244W	EPL1	P43572	832 aa		3	□□□□□ -1.93
PEX5	YDR244W	EKI1	Q03764	534 aa		3	□□□□□ -1.93
PEX5	YDR244W	DIC1	Q06143	298 aa		3	□□□□□ -1.93
PEX5	YDR244W	HER1	Q12276	1246 aa		3	□□□□□ -1.93
PEX5	YDR244W	SUC2	P00724	532 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	YAP1	P19880	650 aa	Known RBP	2.99	□□□□□ -1.93
PEX5	YDR244W	GEX1	P25596	615 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	PRP21	P32524	280 aa	Predicted RBP	2.99	□□□□□ -1.93
PEX5	YDR244W	PFF1	P38244	976 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	EFM2	P38347	419 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	MLH1	P38920	769 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	FYV8	P46949	817 aa	Known RBP	2.99	□□□□□ -1.93
PEX5	YDR244W	NCS2	P53923	493 aa	Predicted RBP	2.99	□□□□□ -1.93
PEX5	YDR244W	ADA2	Q02336	434 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	IVY1	Q04934	453 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	MDM30	Q05930	598 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	DBP9	Q06218	594 aa	Known RBP	2.99	□□□□□ -1.93
PEX5	YDR244W	REX3	Q12090	404 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	CRC1	Q12289	327 aa		2.99	□□□□□ -1.93
PEX5	YDR244W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.99	□□□□□ -1.93
PEX5	YDR244W	SCEI	P03882	235 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	ARO3	P14843	370 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	SEC63	P14906	663 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	DAP2	P18962	818 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	GID7	P25569	745 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	PPZ1	P26570	692 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	FUN19	P28003	413 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	RIM1	P32445	135 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	YEL043W	P32618	956 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	PDR3	P33200	976 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	MRPL4	P36517	319 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	ASC1	P38011	319 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	RFC3	P38629	340 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	FLO5	P38894	1075 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	CCT2	P39076	527 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	YIL024C	P40543	189 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	CFD1	P40558	293 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	GAT1	P43574	510 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	GPI1	P53306	609 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	YNL181W	P53878	407 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	IZH1	Q03419	316 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	RPN9	Q04062	393 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	HSP31	Q04432	237 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	GLO2	Q05584	274 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	PHO92	Q06390	306 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	PML1	Q07930	204 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	PSY3	Q12318	242 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	PGK1	P00560	416 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	LEU4	P06208	619 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	DAL5	P15365	543 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	SPC110	P32380	944 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	UTR4	P32626	227 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	RRP1	P35178	278 aa	Predicted RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	SOR1	P35497	357 aa	Known RBP	2.98	□□□□□ -1.93
PEX5	YDR244W	RRN10	P38204	145 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	CHS6	P40955	746 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	IAH1	P41734	238 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	DSL1	P53847	754 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	ECI1	Q05871	280 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	SOR2	Q07786	357 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	ARP6	Q12509	438 aa		2.98	□□□□□ -1.93
PEX5	YDR244W	GLK1	P17709	500 aa	Known RBP	2.97	□□□□□ -1.93
PEX5	YDR244W	YPK3	P38070	525 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	OLA1	P38219	394 aa	Known RBP	2.97	□□□□□ -1.93
PEX5	YDR244W	ERG7	P38604	731 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	KOG1	P38873	1557 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	RTS2	P40962	232 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	SAS2	P40963	338 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	GPI8	P49018	411 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	PDR16	P53860	351 aa	Known RBP	2.97	□□□□□ -1.93
PEX5	YDR244W	SLD5	Q03406	294 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	GSH2	Q08220	491 aa		2.97	□□□□□ -1.93
PEX5	YDR244W	COX3	P00420	269 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	ADE4	P04046	510 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	RPI1	P23250	407 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	YCR007C	P25354	239 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	APE2	P32454	952 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	PEX2	P32800	271 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	PCA1	P38360	1216 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	FAU1	P40099	211 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	NAS2	P40555	220 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
PEX5	YDR244W	YJR011C	P47086	261 aa	Predicted RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	CUE3	P53137	624 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	YIF1	P53845	314 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	MSS11	Q03825	758 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	YDR387C	Q04162	555 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	SPH1	Q06160	661 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	YFH1	Q07540	174 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	UBX3	Q12229	455 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	RKM5	Q12367	367 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	RPL42A	P0CX27	106 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	RPL42B	P0CX28	106 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	PHO91	P27514	894 aa		2.96	□□□□□ -1.94
PEX5	YDR244W	RRP4	P38792	359 aa	Known RBP	2.96	□□□□□ -1.94
PEX5	YDR244W	PHO86	P46956	311 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms