RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C BUD32P53323 261 aa3.33□□□□□ -1.88
RRP42YDL111C COP1P53622 1201 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C RHO5P53879 331 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C NCS2P53923 493 aaPredicted RBP3.33□□□□□ -1.88
RRP42YDL111C ERG13P54839 491 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C YPL014WQ02606 381 aa3.33□□□□□ -1.88
RRP42YDL111C NUP100Q02629 959 aa3.33□□□□□ -1.88
RRP42YDL111C RPN9Q04062 393 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C YLR456WQ06199 204 aa3.33□□□□□ -1.88
RRP42YDL111C DIS3Q08162 1001 aaKnown RBP3.33□□□□□ -1.88
RRP42YDL111C RRD2Q12461 358 aa3.33□□□□□ -1.88
RRP42YDL111C YPR089WO13585 888 aa3.32□□□□□ -1.88
RRP42YDL111C CAR1P00812 333 aaKnown RBP3.32□□□□□ -1.88
RRP42YDL111C STF1P01098 86 aa3.32□□□□□ -1.88
RRP42YDL111C SCEIP03882 235 aa3.32□□□□□ -1.88
RRP42YDL111C YMR085WP0CF18 432 aa3.32□□□□□ -1.88
RRP42YDL111C BAR1P12630 587 aa3.32□□□□□ -1.88
RRP42YDL111C SEC63P14906 663 aa3.32□□□□□ -1.88
RRP42YDL111C YCR007CP25354 239 aa3.32□□□□□ -1.88
RRP42YDL111C BEM1P29366 551 aa3.32□□□□□ -1.88
RRP42YDL111C SPC110P32380 944 aa3.32□□□□□ -1.88
RRP42YDL111C ATP11P32453 318 aa3.32□□□□□ -1.88
RRP42YDL111C SMI1P32566 505 aa3.32□□□□□ -1.88
RRP42YDL111C ASC1P38011 319 aaKnown RBP3.32□□□□□ -1.88
RRP42YDL111C YPK3P38070 525 aa3.32□□□□□ -1.88
RRP42YDL111C YSW1P38280 609 aa3.32□□□□□ -1.88
RRP42YDL111C EFM2P38347 419 aa3.32□□□□□ -1.88
RRP42YDL111C RFC3P38629 340 aa3.32□□□□□ -1.88
RRP42YDL111C KEL1P38853 1164 aaKnown RBP3.32□□□□□ -1.88
RRP42YDL111C YTA12P40341 825 aa3.32□□□□□ -1.88
RRP42YDL111C SYG1P40528 902 aa3.32□□□□□ -1.88
RRP42YDL111C POP1P41812 875 aa3.32□□□□□ -1.88
RRP42YDL111C YJR011CP47086 261 aaPredicted RBP3.32□□□□□ -1.88
RRP42YDL111C YPT11P48559 417 aa3.32□□□□□ -1.88
RRP42YDL111C YNL181WP53878 407 aa3.32□□□□□ -1.88
RRP42YDL111C HSP31Q04432 237 aa3.32□□□□□ -1.88
RRP42YDL111C MGR3Q04472 501 aa3.32□□□□□ -1.88
RRP42YDL111C YDR341CQ05506 607 aaKnown RBP3.32□□□□□ -1.88
RRP42YDL111C NDL1Q06568 189 aa3.32□□□□□ -1.88
RRP42YDL111C BUG1Q12191 341 aa3.32□□□□□ -1.88
RRP42YDL111C RUP1Q12242 671 aa3.32□□□□□ -1.88
RRP42YDL111C HER1Q12276 1246 aa3.32□□□□□ -1.88
RRP42YDL111C TFB5Q3E7C1 72 aaPredicted RBP3.32□□□□□ -1.88
RRP42YDL111C LEU4P06208 619 aaKnown RBP3.31□□□□□ -1.88
RRP42YDL111C GLK1P17709 500 aaKnown RBP3.31□□□□□ -1.88
RRP42YDL111C RHB1P25378 209 aa3.31□□□□□ -1.88
RRP42YDL111C FUN19P28003 413 aaPredicted RBP3.31□□□□□ -1.88
RRP42YDL111C NIP1P32497 812 aaKnown RBP3.31□□□□□ -1.88
RRP42YDL111C PHD1P36093 366 aa3.31□□□□□ -1.88
RRP42YDL111C MRPL4P36517 319 aa3.31□□□□□ -1.88
RRP42YDL111C OLA1P38219 394 aaKnown RBP3.31□□□□□ -1.88
RRP42YDL111C FAD1P38913 306 aa3.31□□□□□ -1.88
RRP42YDL111C MLH1P38920 769 aa3.31□□□□□ -1.88
RRP42YDL111C CCT2P39076 527 aaKnown RBP3.31□□□□□ -1.88
RRP42YDL111C GPI1P53306 609 aa3.31□□□□□ -1.88
RRP42YDL111C YNL234WP53857 426 aa3.31□□□□□ -1.88
RRP42YDL111C OCA2P53949 197 aa3.31□□□□□ -1.88
RRP42YDL111C GLO2Q05584 274 aa3.31□□□□□ -1.88
RRP42YDL111C MDM30Q05930 598 aa3.31□□□□□ -1.88
RRP42YDL111C DBP9Q06218 594 aaKnown RBP3.31□□□□□ -1.88
RRP42YDL111C YFH1Q07540 174 aa3.31□□□□□ -1.88
RRP42YDL111C CRC1Q12289 327 aa3.31□□□□□ -1.88
RRP42YDL111C YDR061WQ12298 539 aa3.31□□□□□ -1.88
RRP42YDL111C TY1B-AO13527 1196 aaKnown RBP3.3□□□□□ -1.88
RRP42YDL111C MES1P00958 751 aaKnown RBP3.3□□□□□ -1.88
RRP42YDL111C PDE2P06776 526 aa3.3□□□□□ -1.88
RRP42YDL111C PMR1P13586 950 aa3.3□□□□□ -1.88
RRP42YDL111C DAP2P18962 818 aa3.3□□□□□ -1.88
RRP42YDL111C RPS2P25443 254 aaKnown RBP3.3□□□□□ -1.88
RRP42YDL111C RAD24P32641 659 aa3.3□□□□□ -1.88
RRP42YDL111C SPC34P36131 295 aa3.3□□□□□ -1.88
RRP42YDL111C ADH5P38113 351 aaKnown RBP3.3□□□□□ -1.88
RRP42YDL111C GND1P38720 489 aaKnown RBP3.3□□□□□ -1.88
RRP42YDL111C FAU1P40099 211 aa3.3□□□□□ -1.88
RRP42YDL111C CSM2P40465 213 aa3.3□□□□□ -1.88
RRP42YDL111C YIL024CP40543 189 aa3.3□□□□□ -1.88
RRP42YDL111C NAS2P40555 220 aa3.3□□□□□ -1.88
RRP42YDL111C CHS6P40955 746 aa3.3□□□□□ -1.88
RRP42YDL111C RTS2P40962 232 aa3.3□□□□□ -1.88
RRP42YDL111C FET5P43561 622 aa3.3□□□□□ -1.88
RRP42YDL111C EPL1P43572 832 aa3.3□□□□□ -1.88
RRP42YDL111C DSL1P53847 754 aa3.3□□□□□ -1.88
RRP42YDL111C YDR541CQ03049 344 aa3.3□□□□□ -1.88
RRP42YDL111C EKI1Q03764 534 aa3.3□□□□□ -1.88
RRP42YDL111C IVY1Q04934 453 aa3.3□□□□□ -1.88
RRP42YDL111C DIC1Q06143 298 aa3.3□□□□□ -1.88
RRP42YDL111C ATX2Q12067 313 aa3.3□□□□□ -1.88
RRP42YDL111C YLR112WQ12130 139 aa3.3□□□□□ -1.88
RRP42YDL111C PSY3Q12318 242 aa3.3□□□□□ -1.88
RRP42YDL111C NBL1Q3E7Y6 73 aa3.3□□□□□ -1.88
RRP42YDL111C ADE4P04046 510 aaKnown RBP3.29□□□□□ -1.88
RRP42YDL111C ARO3P14843 370 aaKnown RBP3.29□□□□□ -1.88
RRP42YDL111C EXO70P19658 623 aa3.29□□□□□ -1.88
RRP42YDL111C YAP1P19880 650 aaKnown RBP3.29□□□□□ -1.88
RRP42YDL111C HSP104P31539 908 aaKnown RBP3.29□□□□□ -1.88
RRP42YDL111C RIM1P32445 135 aaKnown RBP3.29□□□□□ -1.88
RRP42YDL111C RRN10P38204 145 aa3.29□□□□□ -1.88
RRP42YDL111C PFF1P38244 976 aa3.29□□□□□ -1.88
RRP42YDL111C ERG7P38604 731 aa3.29□□□□□ -1.88
RRP42YDL111C RRF1P38771 230 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms