RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	ECM9	Q02202	377 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	NHP10	Q03435	203 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	MUS81	Q04149	632 aa	Predicted RBP	6.01	□□□□□ -1.45
RSA4	YCR072C	GSF2	Q04697	403 aa	Known RBP	6.01	□□□□□ -1.45
RSA4	YCR072C	ADE13	Q05911	482 aa	Known RBP	6.01	□□□□□ -1.45
RSA4	YCR072C	YPD1	Q07688	167 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	YEH1	Q07804	573 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	SYC1	Q08553	188 aa	Predicted RBP	6.01	□□□□□ -1.45
RSA4	YCR072C	YOR012W	Q12351	137 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	DGK1	Q12382	290 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	DCN1	Q12395	269 aa		6.01	□□□□□ -1.45
RSA4	YCR072C	TUF1	P02992	437 aa	Known RBP	6	□□□□□ -1.45
RSA4	YCR072C	HVG1	P0CE11	249 aa		6	□□□□□ -1.45
RSA4	YCR072C	CAP2	P13517	287 aa		6	□□□□□ -1.45
RSA4	YCR072C	ABF1	P14164	731 aa		6	□□□□□ -1.45
RSA4	YCR072C	COQ1	P18900	473 aa		6	□□□□□ -1.45
RSA4	YCR072C	YKU70	P32807	602 aa		6	□□□□□ -1.45
RSA4	YCR072C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6	□□□□□ -1.45	not detected
RSA4	YCR072C	YBR259W	P38338	688 aa		6	□□□□□ -1.45
RSA4	YCR072C	PRS2	P38620	318 aa	Known RBP	6	□□□□□ -1.45
RSA4	YCR072C	LNP1	P38878	278 aa		6	□□□□□ -1.45
RSA4	YCR072C	AXL2	P38928	823 aa		6	□□□□□ -1.45
RSA4	YCR072C	ECM10	P39987	644 aa		6	□□□□□ -1.45
RSA4	YCR072C	ASG1	P40467	964 aa		6	□□□□□ -1.45
RSA4	YCR072C	FAR3	P46671	204 aa		6	□□□□□ -1.45
RSA4	YCR072C	UBC12	P52491	188 aa		6	□□□□□ -1.45
RSA4	YCR072C	TVP15	Q03860	143 aa		6	□□□□□ -1.45
RSA4	YCR072C	ARP10	Q04549	284 aa		6	□□□□□ -1.45
RSA4	YCR072C	YPS7	Q06325	596 aa		6	□□□□□ -1.45
RSA4	YCR072C	CUE5	Q08412	411 aa	Known RBP	6	□□□□□ -1.45
RSA4	YCR072C	FRE5	Q08908	694 aa		6	□□□□□ -1.45
RSA4	YCR072C	MLH3	Q12083	715 aa		6	□□□□□ -1.45
RSA4	YCR072C	RRP12	Q12754	1228 aa	Known RBP	6	□□□□□ -1.45
RSA4	YCR072C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
RSA4	YCR072C	RAD10	P06838	210 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	RPS21A	P0C0V8	87 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	GIT1	P25346	518 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	ADP1	P25371	1049 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	MGT1	P26188	188 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	HYM1	P32464	399 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	SRB2	P34162	210 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YKL107W	P34251	309 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	SHM2	P37291	469 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	ERT1	P38140	529 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	STB5	P38699	743 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YHK8	P38776	514 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	DUN1	P39009	513 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	CSM2	P40465	213 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	IMA5	P40884	581 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	CHS6	P40955	746 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	BST1	P43571	1029 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	AIM23	P47015	356 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	PYK2	P52489	506 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	SLD3	P53135	668 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
RSA4	YCR072C	UBP16	Q02863	499 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	TRM82	Q03774	444 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	ATG33	Q06485	197 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	MHR1	Q06630	226 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	GSH2	Q08220	491 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	REX3	Q12090	404 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	HMS1	Q12398	434 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	STF1	P01098	86 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	SNF1	P06782	633 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	HOM2	P13663	365 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	TRX1	P22217	103 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	SRO9	P25567	434 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	SEC1	P30619	724 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	DBF4	P32325	704 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	CDC13	P32797	924 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	SKG1	P36169	355 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	GIC1	P38785	314 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YHR131C	P38835	850 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	FHL1	P39521	936 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	LSM5	P40089	93 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	YKE4	P40544	346 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	RMD8	P43620	662 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YJL016W	P47072	561 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YJR141W	P47172	347 aa	Predicted RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	NIT3	P49954	291 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	ARL3	Q02804	198 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	EAR1	Q03212	550 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	NGL2	Q03264	515 aa	Known RBP	5.99	□□□□□ -1.45
RSA4	YCR072C	FAR10	Q06001	478 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	SWA2	Q06677	668 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YET3	Q07451	203 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	AAD15	Q08361	143 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	RPN6	Q12377	434 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	ARP7	Q12406	477 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YCL001W-B	Q96VH2	84 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	DFG16	Q99234	619 aa		5.99	□□□□□ -1.45
RSA4	YCR072C	YIL177C	P40434	1758 aa		5.98	□□□□□ -1.45
RSA4	YCR072C	YJL225C	P40889	1758 aa		5.98	□□□□□ -1.45
RSA4	YCR072C	CBP2	P03874	630 aa	Predicted RBP	5.98	□□□□□ -1.45
RSA4	YCR072C	RPL25	P04456	142 aa	Known RBP	5.98	□□□□□ -1.45
RSA4	YCR072C	STE3	P06783	470 aa		5.98	□□□□□ -1.45
RSA4	YCR072C	RPL3	P14126	387 aa	Known RBP	5.98	□□□□□ -1.45
RSA4	YCR072C	NSP1	P14907	823 aa	Known RBP	5.98	□□□□□ -1.45
RSA4	YCR072C	GUK1	P15454	187 aa	Known RBP	5.98	□□□□□ -1.45
RSA4	YCR072C	PDX1	P16451	410 aa		5.98	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms