RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 SRB2P34162 210 aa-0.03□□□□□ -2.41
snR50snR50 YKL100CP34248 587 aa-0.03□□□□□ -2.41
snR50snR50 YNG2P38806 282 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 WSS1P38838 269 aa-0.03□□□□□ -2.41
snR50snR50 VPS27P40343 622 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 STB1P42845 420 aa-0.03□□□□□ -2.41
snR50snR50 PGU1P47180 361 aa-0.03□□□□□ -2.41
snR50snR50 BUD32P53323 261 aa-0.03□□□□□ -2.41
snR50snR50 KTR6P54070 446 aa-0.03□□□□□ -2.41
snR50snR50 RBS1Q05672 457 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 MRD1Q06106 887 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 PHO92Q06390 306 aa-0.03□□□□□ -2.41
snR50snR50 ECM30Q06673 1274 aa-0.03□□□□□ -2.41
snR50snR50 MCH1Q07376 486 aa-0.03□□□□□ -2.41
snR50snR50 BRE1Q07457 700 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 RTT109Q07794 436 aa-0.03□□□□□ -2.41
snR50snR50 LEU9Q12166 604 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 NCE102Q12207 173 aaRIP-Chip data-0.03□□□□□ -2.41not detected
snR50snR50 YDR061WQ12298 539 aa-0.03□□□□□ -2.41
snR50snR50 IZH2Q12442 317 aa-0.03□□□□□ -2.41
snR50snR50 PUT4P15380 627 aa-0.04□□□□□ -2.42
snR50snR50 GLK1P17709 500 aaKnown RBP-0.04□□□□□ -2.42
snR50snR50 RPB5P20434 215 aa-0.04□□□□□ -2.42
snR50snR50 SUI2P20459 304 aaKnown RBP-0.04□□□□□ -2.42
snR50snR50 PHO84P25297 587 aaKnown RBP-0.04□□□□□ -2.42
snR50snR50 APE2P32454 952 aaKnown RBP-0.04□□□□□ -2.42
snR50snR50 CSE2P33308 149 aa-0.04□□□□□ -2.42
snR50snR50 FRE2P36033 711 aa-0.04□□□□□ -2.42
snR50snR50 RSM22P36056 628 aa-0.04□□□□□ -2.42
snR50snR50 MRPL27P36526 146 aaPredicted RBP-0.04□□□□□ -2.42
snR50snR50 SDH4P37298 181 aa-0.04□□□□□ -2.42
snR50snR50 RIB5P38145 238 aa-0.04□□□□□ -2.42
snR50snR50 RTC2P38279 296 aa-0.04□□□□□ -2.42
snR50snR50 CHL4P38907 458 aa-0.04□□□□□ -2.42
snR50snR50 MST28P39552 234 aa-0.04□□□□□ -2.42
snR50snR50 YER184CP39961 794 aa-0.04□□□□□ -2.42
snR50snR50 YGL262WP53054 175 aa-0.04□□□□□ -2.42
snR50snR50 DRN1P53255 507 aaKnown RBP-0.04□□□□□ -2.42
snR50snR50 DUG3P53871 357 aa-0.04□□□□□ -2.42
snR50snR50 YMR181CQ03231 154 aa-0.04□□□□□ -2.42
snR50snR50 FOL3Q12676 427 aaPredicted RBP-0.04□□□□□ -2.42
snR50snR50 YOR019WQ99248 730 aa-0.04□□□□□ -2.42
snR50snR50 VCX1Q99385 411 aa-0.04□□□□□ -2.42
snR50snR50 CYC3P06182 269 aa-0.05□□□□□ -2.42
snR50snR50 RAD52P06778 471 aaKnown RBP-0.05□□□□□ -2.42
snR50snR50 RPB2P08518 1224 aaKnown RBP-0.05□□□□□ -2.42
snR50snR50 ADH7P25377 361 aa-0.05□□□□□ -2.42
snR50snR50 BUB3P26449 341 aa-0.05□□□□□ -2.42
snR50snR50 PDB1P32473 366 aaKnown RBP-0.05□□□□□ -2.42
snR50snR50 ECM25P32525 599 aa-0.05□□□□□ -2.42
snR50snR50 SKN1P33336 771 aa-0.05□□□□□ -2.42
snR50snR50 AST1P35183 429 aa-0.05□□□□□ -2.42
snR50snR50 IFA38P38286 347 aa-0.05□□□□□ -2.42
snR50snR50 OCA5P38738 679 aa-0.05□□□□□ -2.42
snR50snR50 MNN5P46982 586 aa-0.05□□□□□ -2.42
snR50snR50 MAD3P47074 515 aa-0.05□□□□□ -2.42
snR50snR50 DSD1P53095 428 aa-0.05□□□□□ -2.42
snR50snR50 HST4P53688 370 aa-0.05□□□□□ -2.42
snR50snR50 CPR6P53691 371 aaKnown RBP-0.05□□□□□ -2.42
snR50snR50 ZRG17P53735 605 aa-0.05□□□□□ -2.42
snR50snR50 RGM1Q00453 211 aa-0.05□□□□□ -2.42
snR50snR50 TRS130Q03660 1102 aa-0.05□□□□□ -2.42
snR50snR50 PPM1Q04081 328 aa-0.05□□□□□ -2.42
snR50snR50 CMS1Q07897 291 aaKnown RBP-0.05□□□□□ -2.42
snR50snR50 TMA16Q08687 178 aa-0.05□□□□□ -2.42
snR50snR50 MUM3Q08750 479 aa-0.05□□□□□ -2.42
snR50snR50 ERG27Q12452 347 aaKnown RBP-0.05□□□□□ -2.42
snR50snR50 RPS19AP07280 144 aaKnown RBP-0.06□□□□□ -2.42
snR50snR50 RPS19BP07281 144 aaPredicted RBP-0.06□□□□□ -2.42
snR50snR50 KAR1P11927 433 aa-0.06□□□□□ -2.42
snR50snR50 DAL5P15365 543 aa-0.06□□□□□ -2.42
snR50snR50 SWI4P25302 1093 aaKnown RBP-0.06□□□□□ -2.42
snR50snR50 YCR100CP25606 316 aa-0.06□□□□□ -2.42
snR50snR50 CDC50P25656 391 aa-0.06□□□□□ -2.42
snR50snR50 RML2P32611 393 aa-0.06□□□□□ -2.42
snR50snR50 PPQ1P32945 549 aa-0.06□□□□□ -2.42
snR50snR50 PSD1P39006 500 aa-0.06□□□□□ -2.42
snR50snR50 PCF11P39081 626 aaPredicted RBP-0.06□□□□□ -2.42
snR50snR50 MDE1P47095 244 aa-0.06□□□□□ -2.42
snR50snR50 NOP7P53261 605 aaKnown RBP-0.06□□□□□ -2.42
snR50snR50 YGR126WP53274 230 aa-0.06□□□□□ -2.42
snR50snR50 YGR127WP53275 312 aa-0.06□□□□□ -2.42
snR50snR50 YNR061CP53747 219 aa-0.06□□□□□ -2.42
snR50snR50 SLG1P54867 378 aa-0.06□□□□□ -2.42
snR50snR50 CEG1Q01159 459 aaPredicted RBP-0.06□□□□□ -2.42
snR50snR50 ADA2Q02336 434 aa-0.06□□□□□ -2.42
snR50snR50 NUP116Q02630 1113 aa-0.06□□□□□ -2.42
snR50snR50 PNG1Q02890 363 aa-0.06□□□□□ -2.42
snR50snR50 MSC1Q03104 513 aa-0.06□□□□□ -2.42
snR50snR50 YET2Q04210 160 aa-0.06□□□□□ -2.42
snR50snR50 PHM6Q05637 104 aa-0.06□□□□□ -2.42
snR50snR50 FAR10Q06001 478 aa-0.06□□□□□ -2.42
snR50snR50 LIP2Q06005 328 aa-0.06□□□□□ -2.42
snR50snR50 RIX7Q07844 837 aaKnown RBP-0.06□□□□□ -2.42
snR50snR50 TEN1Q07921 160 aa-0.06□□□□□ -2.42
snR50snR50 YOR338WQ99326 363 aa-0.06□□□□□ -2.42
snR50snR50 YBR085C-AO43137 85 aa-0.07□□□□□ -2.42
snR50snR50 PEP4P07267 405 aaKnown RBP-0.07□□□□□ -2.42
snR50snR50 TY2A-LR1P0C2J4 438 aa-0.07□□□□□ -2.42
snR50snR50 YAR066WP0CX18 203 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms