RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	MES1	P00958	751 aa	Known RBP	3.1	□□□□□ -1.91
SDS22	YKL193C	RNA14	P25298	677 aa	Known RBP	3.1	□□□□□ -1.91
SDS22	YKL193C	KEL1	P38853	1164 aa	Known RBP	3.1	□□□□□ -1.91
SDS22	YKL193C	IDP2	P41939	412 aa		3.1	□□□□□ -1.91
SDS22	YKL193C	GWT1	P47026	490 aa		3.1	□□□□□ -1.91
SDS22	YKL193C	KEL3	Q08979	651 aa	Predicted RBP	3.1	□□□□□ -1.91
SDS22	YKL193C	CTF3	Q12748	733 aa		3.1	□□□□□ -1.91
SDS22	YKL193C	YCL021W-A	Q96VH3	125 aa		3.1	□□□□□ -1.91
SDS22	YKL193C	GCN4	P03069	281 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SDS22	YKL193C	HSC82	P15108	705 aa	Known RBP	3.09	□□□□□ -1.91
SDS22	YKL193C	GLK1	P17709	500 aa	Known RBP	3.09	□□□□□ -1.91
SDS22	YKL193C	EXO70	P19658	623 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	ATP11	P32453	318 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	YBR225W	P38321	900 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	MBB1	P39534	108 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	DOT5	P40553	215 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	PET130	P47065	347 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	CAF130	P53280	1122 aa	Predicted RBP	3.09	□□□□□ -1.91
SDS22	YKL193C	IMH1	Q06704	911 aa	Known RBP	3.09	□□□□□ -1.91
SDS22	YKL193C	YDL121C	Q07541	149 aa		3.09	□□□□□ -1.91
SDS22	YKL193C	RAV1	P47104	1357 aa		3.09	□□□□□ -1.92
SDS22	YKL193C	IMP2'	P32351	346 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	MRE11	P32829	692 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	YEL057C	P39983	233 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	SPG5	P42933	373 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	ELP2	P42935	788 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	YPI1	P43587	155 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	MSO1	P53604	210 aa	Known RBP	3.08	□□□□□ -1.92
SDS22	YKL193C	SLG1	P54867	378 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	TIM10	P87108	93 aa		3.08	□□□□□ -1.92
SDS22	YKL193C	PMR1	P13586	950 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	SWH1	P35845	1188 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	YBP1	P38315	674 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	ERP2	P39704	215 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	FAU1	P40099	211 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	MET28	P40573	187 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	ARK1	P53974	638 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	MFB1	Q04922	465 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	HNT3	Q08702	217 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	YDL007C-A	Q2V2Q0	85 aa		3.07	□□□□□ -1.92
SDS22	YKL193C	FOB1	O13329	566 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	RPL31B	P0C2H9	113 aa	Known RBP	3.06	□□□□□ -1.92
SDS22	YKL193C	OCA4	P25366	362 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	LDB16	P25587	256 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	BUB3	P26449	341 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	MFT1	P33441	392 aa	Known RBP	3.06	□□□□□ -1.92
SDS22	YKL193C	RRT2	P38332	387 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	YMR147W	P40218	223 aa	Known RBP	3.06	□□□□□ -1.92
SDS22	YKL193C	SPO22	P40511	975 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	SYG1	P40528	902 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	MKT1	P40850	830 aa	Known RBP	3.06	□□□□□ -1.92
SDS22	YKL193C	GCD10	P41814	478 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	RMD8	P43620	662 aa		3.06	□□□□□ -1.92
SDS22	YKL193C	LPD1	P09624	499 aa	Known RBP	3.05	□□□□□ -1.92
SDS22	YKL193C	CPR1	P14832	162 aa	Known RBP	3.05	□□□□□ -1.92
SDS22	YKL193C	LSB5	P25369	354 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	FUN19	P28003	413 aa	Predicted RBP	3.05	□□□□□ -1.92
SDS22	YKL193C	CST26	P38226	397 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	PIR3	Q03180	325 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	YDR239C	Q03780	787 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	PDS5	Q04264	1277 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	SEC39	Q12745	709 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	YER078W-A	Q3E7A2	54 aa		3.05	□□□□□ -1.92
SDS22	YKL193C	BRR1	Q99177	341 aa	Predicted RBP	3.05	□□□□□ -1.92
SDS22	YKL193C	FRE2	P36033	711 aa		3.04	□□□□□ -1.92
SDS22	YKL193C	POP1	P41812	875 aa		3.04	□□□□□ -1.92
SDS22	YKL193C	OCA1	P50946	238 aa	Predicted RBP	3.04	□□□□□ -1.92
SDS22	YKL193C	RPT6	Q01939	405 aa	Known RBP	3.04	□□□□□ -1.92
SDS22	YKL193C	MRD1	Q06106	887 aa	Known RBP	3.04	□□□□□ -1.92
SDS22	YKL193C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
SDS22	YKL193C	RRD2	Q12461	358 aa		3.04	□□□□□ -1.92
SDS22	YKL193C	HIP1	P06775	603 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	CHS1	P08004	1131 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	RFS1	P38234	210 aa	Known RBP	3.03	□□□□□ -1.92
SDS22	YKL193C	RRT5	P43607	289 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	AVT4	P50944	713 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	YGL108C	P53139	140 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	TWF1	P53250	332 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	MED1	Q12321	566 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	RRI2	Q12348	645 aa		3.03	□□□□□ -1.92
SDS22	YKL193C	ARG3	P05150	338 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	NDI1	P32340	513 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	MRP4	P32902	394 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	RSM22	P36056	628 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	MET18	P40469	1032 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	URB2	P47108	1174 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	ART5	P53244	586 aa	Known RBP	3.02	□□□□□ -1.93
SDS22	YKL193C	CAF40	P53829	373 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	APJ1	P53940	528 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	KTR5	P53966	522 aa	Predicted RBP	3.02	□□□□□ -1.93
SDS22	YKL193C	TAP42	Q04372	366 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	BUD21	Q08492	214 aa	Predicted RBP	3.02	□□□□□ -1.93
SDS22	YKL193C	ATG29	Q12092	213 aa		3.02	□□□□□ -1.93
SDS22	YKL193C	YML133C	Q03099	1374 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	YLL067C	Q07888	1374 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	YLL066C	Q99208	1374 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	LEU4	P06208	619 aa	Known RBP	3.01	□□□□□ -1.93
SDS22	YKL193C	GPI10	P30777	616 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	GLC7	P32598	312 aa	Known RBP	3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms