RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W IKS1P47042 667 aa2.45□□□□□ -2.02
PEP8YJL053W AIM22P47051 409 aa2.45□□□□□ -2.02
PEP8YJL053W URB2P47108 1174 aa2.45□□□□□ -2.02
PEP8YJL053W BUD32P53323 261 aa2.45□□□□□ -2.02
PEP8YJL053W HEF3P53978 1044 aaKnown RBP2.45□□□□□ -2.02
PEP8YJL053W RQC1Q05468 723 aaKnown RBP2.45□□□□□ -2.02
PEP8YJL053W YLR287CQ05881 355 aa2.45□□□□□ -2.02
PEP8YJL053W MRD1Q06106 887 aaKnown RBP2.45□□□□□ -2.02
PEP8YJL053W NCE102Q12207 173 aaRIP-Chip data2.45□□□□□ -2.02not detected
PEP8YJL053W RAD52P06778 471 aaKnown RBP2.44□□□□□ -2.02
PEP8YJL053W RPL31BP0C2H9 113 aaKnown RBP2.44□□□□□ -2.02
PEP8YJL053W ROX1P25042 368 aa2.44□□□□□ -2.02
PEP8YJL053W GPI10P30777 616 aa2.44□□□□□ -2.02
PEP8YJL053W UTR4P32626 227 aa2.44□□□□□ -2.02
PEP8YJL053W REC114P32841 428 aa2.44□□□□□ -2.02
PEP8YJL053W SEC66P33754 206 aa2.44□□□□□ -2.02
PEP8YJL053W DUG2P38149 878 aa2.44□□□□□ -2.02
PEP8YJL053W TIF4631P39935 952 aaKnown RBP2.44□□□□□ -2.02
PEP8YJL053W YER130CP39959 443 aa2.44□□□□□ -2.02
PEP8YJL053W SCD6P45978 349 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
PEP8YJL053W OCA1P50946 238 aaPredicted RBP2.44□□□□□ -2.02
PEP8YJL053W ZPR1P53303 486 aaKnown RBP2.44□□□□□ -2.02
PEP8YJL053W GPI1P53306 609 aa2.44□□□□□ -2.02
PEP8YJL053W JJJ1P53863 590 aa2.44□□□□□ -2.02
PEP8YJL053W GIR2Q03768 265 aaPredicted RBP2.44□□□□□ -2.02
PEP8YJL053W VPS74Q06385 345 aa2.44□□□□□ -2.02
PEP8YJL053W PPT2Q12036 173 aa2.44□□□□□ -2.02
PEP8YJL053W DAP1Q12091 152 aa2.44□□□□□ -2.02
PEP8YJL053W YDL009CQ12210 107 aa2.44□□□□□ -2.02
PEP8YJL053W SCM3Q12334 223 aa2.44□□□□□ -2.02
PEP8YJL053W MET17P06106 444 aa2.43□□□□□ -2.02
PEP8YJL053W RHO2P06781 192 aa2.43□□□□□ -2.02
PEP8YJL053W CLC1P17891 233 aa2.43□□□□□ -2.02
PEP8YJL053W FUR1P18562 216 aaKnown RBP2.43□□□□□ -2.02
PEP8YJL053W CLB3P24870 427 aa2.43□□□□□ -2.02
PEP8YJL053W RAD14P28519 371 aa2.43□□□□□ -2.02
PEP8YJL053W NDC1P32500 655 aa2.43□□□□□ -2.02
PEP8YJL053W MSN2P33748 704 aa2.43□□□□□ -2.02
PEP8YJL053W SIP2P34164 415 aaKnown RBP2.43□□□□□ -2.02
PEP8YJL053W TCM62P38228 572 aaKnown RBP2.43□□□□□ -2.02
PEP8YJL053W MDM31P38880 579 aa2.43□□□□□ -2.02
PEP8YJL053W SMF1P38925 575 aa2.43□□□□□ -2.02
PEP8YJL053W MBB1P39534 108 aa2.43□□□□□ -2.02
PEP8YJL053W POP1P41812 875 aa2.43□□□□□ -2.02
PEP8YJL053W MNP1P53163 194 aaPredicted RBP2.43□□□□□ -2.02
PEP8YJL053W SLD5Q03406 294 aa2.43□□□□□ -2.02
PEP8YJL053W SYF1Q04048 859 aaPredicted RBP2.43□□□□□ -2.02
PEP8YJL053W TAF11Q04226 346 aa2.43□□□□□ -2.02
PEP8YJL053W MRPL51Q06090 140 aaPredicted RBP2.43□□□□□ -2.02
PEP8YJL053W VTA1Q06263 330 aa2.43□□□□□ -2.02
PEP8YJL053W PHO92Q06390 306 aa2.43□□□□□ -2.02
PEP8YJL053W RTN2Q12443 393 aa2.43□□□□□ -2.02
PEP8YJL053W SUC2P00724 532 aa2.42□□□□□ -2.02
PEP8YJL053W SPS4P09937 338 aa2.42□□□□□ -2.02
PEP8YJL053W REC107P21651 314 aa2.42□□□□□ -2.02
PEP8YJL053W ELO2P25358 347 aa2.42□□□□□ -2.02
PEP8YJL053W FRE1P32791 686 aa2.42□□□□□ -2.02
PEP8YJL053W GYP6P32806 458 aa2.42□□□□□ -2.02
PEP8YJL053W PMT1P33775 817 aa2.42□□□□□ -2.02
PEP8YJL053W RSM22P36056 628 aa2.42□□□□□ -2.02
PEP8YJL053W YBP1P38315 674 aa2.42□□□□□ -2.02
PEP8YJL053W VPS52P39904 641 aa2.42□□□□□ -2.02
PEP8YJL053W RMD9P53140 646 aaKnown RBP2.42□□□□□ -2.02
PEP8YJL053W DRN1P53255 507 aaKnown RBP2.42□□□□□ -2.02
PEP8YJL053W IRC15Q02733 499 aa2.42□□□□□ -2.02
PEP8YJL053W YMR087WQ04299 284 aa2.42□□□□□ -2.02
PEP8YJL053W RBS1Q05672 457 aaKnown RBP2.42□□□□□ -2.02
PEP8YJL053W BNA5Q05979 453 aa2.42□□□□□ -2.02
PEP8YJL053W SYO1Q07395 620 aa2.42□□□□□ -2.02
PEP8YJL053W CFT2Q12102 859 aaPredicted RBP2.42□□□□□ -2.02
PEP8YJL053W GRX6Q12438 231 aa2.42□□□□□ -2.02
PEP8YJL053W MES1P00958 751 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W LEU4P06208 619 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W RPL20AP0CX23 172 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W RPL20BP0CX24 172 aaPredicted RBP2.41□□□□□ -2.02
PEP8YJL053W GLK1P17709 500 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W SGV1P23293 657 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W AFG1P32317 509 aa2.41□□□□□ -2.02
PEP8YJL053W NPL6P32832 435 aa2.41□□□□□ -2.02
PEP8YJL053W NFU1P32860 256 aa2.41□□□□□ -2.02
PEP8YJL053W MFT1P33441 392 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W ALG8P40351 577 aa2.41□□□□□ -2.02
PEP8YJL053W VTC2P43585 828 aa2.41□□□□□ -2.02
PEP8YJL053W RTT101P47050 842 aa2.41□□□□□ -2.02
PEP8YJL053W YGL108CP53139 140 aa2.41□□□□□ -2.02
PEP8YJL053W RPM2Q02773 1202 aa2.41□□□□□ -2.02
PEP8YJL053W RPC11Q04307 110 aaPredicted RBP2.41□□□□□ -2.02
PEP8YJL053W SOV1Q04748 898 aa2.41□□□□□ -2.02
PEP8YJL053W ERP1Q05359 219 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W HCR1Q05775 265 aaKnown RBP2.41□□□□□ -2.02
PEP8YJL053W SET6Q12529 373 aa2.41□□□□□ -2.02
PEP8YJL053W ATR1P13090 542 aa2.4□□□□□ -2.03
PEP8YJL053W RPL3P14126 387 aaKnown RBP2.4□□□□□ -2.03
PEP8YJL053W AMD1P15274 810 aaKnown RBP2.4□□□□□ -2.03
PEP8YJL053W SPB1P25582 841 aaPredicted RBP2.4□□□□□ -2.03
PEP8YJL053W CRM1P30822 1084 aaKnown RBP2.4□□□□□ -2.03
PEP8YJL053W ERG3P32353 365 aa2.4□□□□□ -2.03
PEP8YJL053W SPC110P32380 944 aa2.4□□□□□ -2.03
PEP8YJL053W HCS1P34243 683 aa2.4□□□□□ -2.03
PEP8YJL053W SHO1P40073 367 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 152.7 ms