RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W RAD52P06778 471 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W SEC62P21825 274 aa2.13□□□□□ -2.07
SMD1YGR074W MGR1P25573 417 aa2.13□□□□□ -2.07
SMD1YGR074W BUD14P27637 709 aa2.13□□□□□ -2.07
SMD1YGR074W BRF1P29056 596 aa2.13□□□□□ -2.07
SMD1YGR074W RML2P32611 393 aa2.13□□□□□ -2.07
SMD1YGR074W TRS65P32893 560 aa2.13□□□□□ -2.07
SMD1YGR074W MDL1P33310 695 aa2.13□□□□□ -2.07
SMD1YGR074W RSM22P36056 628 aa2.13□□□□□ -2.07
SMD1YGR074W DUG2P38149 878 aa2.13□□□□□ -2.07
SMD1YGR074W TIF4631P39935 952 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W PCL6P40038 420 aa2.13□□□□□ -2.07
SMD1YGR074W ELP2P42935 788 aa2.13□□□□□ -2.07
SMD1YGR074W BUD32P53323 261 aa2.13□□□□□ -2.07
SMD1YGR074W DSL1P53847 754 aa2.13□□□□□ -2.07
SMD1YGR074W BNI5P53890 448 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W NCS2P53923 493 aaPredicted RBP2.13□□□□□ -2.07
SMD1YGR074W BET4Q00618 327 aa2.13□□□□□ -2.07
SMD1YGR074W SMA1Q02651 245 aa2.13□□□□□ -2.07
SMD1YGR074W ARX1Q03862 593 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W YMR130WQ04223 302 aa2.13□□□□□ -2.07
SMD1YGR074W RBS1Q05672 457 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W YLR281CQ05863 155 aa2.13□□□□□ -2.07
SMD1YGR074W SIL1Q08199 421 aa2.13□□□□□ -2.07
SMD1YGR074W NRT1Q08485 598 aa2.13□□□□□ -2.07
SMD1YGR074W DCI1Q08558 271 aa2.13□□□□□ -2.07
SMD1YGR074W DSE3Q08729 430 aa2.13□□□□□ -2.07
SMD1YGR074W AEP3Q12089 606 aa2.13□□□□□ -2.07
SMD1YGR074W SNU66Q12420 587 aaPredicted RBP2.13□□□□□ -2.07
SMD1YGR074W PDH1Q12428 516 aaKnown RBP2.13□□□□□ -2.07
SMD1YGR074W MES1P00958 751 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W RPL42AP0CX27 106 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W RPL42BP0CX28 106 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W BAR1P12630 587 aa2.12□□□□□ -2.07
SMD1YGR074W APE1P14904 514 aa2.12□□□□□ -2.07
SMD1YGR074W ELO2P25358 347 aa2.12□□□□□ -2.07
SMD1YGR074W ERV1P27882 189 aa2.12□□□□□ -2.07
SMD1YGR074W FUN19P28003 413 aaPredicted RBP2.12□□□□□ -2.07
SMD1YGR074W URA7P28274 579 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W RPN2P32565 945 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W UTR4P32626 227 aa2.12□□□□□ -2.07
SMD1YGR074W RAD24P32641 659 aa2.12□□□□□ -2.07
SMD1YGR074W MSN2P33748 704 aa2.12□□□□□ -2.07
SMD1YGR074W ASK1P35734 292 aa2.12□□□□□ -2.07
SMD1YGR074W ARP1P38696 384 aa2.12□□□□□ -2.07
SMD1YGR074W LEU5P38702 357 aa2.12□□□□□ -2.07
SMD1YGR074W YTA12P40341 825 aa2.12□□□□□ -2.07
SMD1YGR074W CSM2P40465 213 aa2.12□□□□□ -2.07
SMD1YGR074W RPS0BP46654 252 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W YGR111WP53265 400 aa2.12□□□□□ -2.07
SMD1YGR074W SCW4P53334 386 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W TDA7P53882 636 aaPredicted RBP2.12□□□□□ -2.07
SMD1YGR074W MDG1P53885 366 aa2.12□□□□□ -2.07
SMD1YGR074W ESBP6P53918 673 aa2.12□□□□□ -2.07
SMD1YGR074W SAM50P53969 484 aa2.12□□□□□ -2.07
SMD1YGR074W RPL15BP54780 204 aaPredicted RBP2.12□□□□□ -2.07
SMD1YGR074W MSS11Q03825 758 aa2.12□□□□□ -2.07
SMD1YGR074W SOV1Q04748 898 aa2.12□□□□□ -2.07
SMD1YGR074W YMR254CQ04838 102 aa2.12□□□□□ -2.07
SMD1YGR074W YLR345WQ06137 509 aa2.12□□□□□ -2.07
SMD1YGR074W DIC1Q06143 298 aa2.12□□□□□ -2.07
SMD1YGR074W FMP45Q07651 309 aa2.12□□□□□ -2.07
SMD1YGR074W YOR365CQ08844 703 aa2.12□□□□□ -2.07
SMD1YGR074W LSP1Q12230 341 aaKnown RBP2.12□□□□□ -2.07
SMD1YGR074W SPT7P35177 1332 aa2.12□□□□□ -2.07
SMD1YGR074W HIP1P06775 603 aa2.11□□□□□ -2.07
SMD1YGR074W YER190C-BP0CX94 160 aa2.11□□□□□ -2.07
SMD1YGR074W YEL077W-AP0CX95 160 aa2.11□□□□□ -2.07
SMD1YGR074W YGR296C-BP0CX96 160 aa2.11□□□□□ -2.07
SMD1YGR074W YPL283W-BP0CX97 160 aa2.11□□□□□ -2.07
SMD1YGR074W YPR204C-AP0CX98 160 aa2.11□□□□□ -2.07
SMD1YGR074W SPO7P18410 259 aa2.11□□□□□ -2.07
SMD1YGR074W ATP10P18496 279 aa2.11□□□□□ -2.07
SMD1YGR074W URA4P20051 364 aa2.11□□□□□ -2.07
SMD1YGR074W OPI1P21957 404 aa2.11□□□□□ -2.07
SMD1YGR074W YIM1P28625 365 aa2.11□□□□□ -2.07
SMD1YGR074W ACH1P32316 526 aa2.11□□□□□ -2.07
SMD1YGR074W RRP1P35178 278 aaPredicted RBP2.11□□□□□ -2.07
SMD1YGR074W RRT2P38332 387 aa2.11□□□□□ -2.07
SMD1YGR074W OSH3P38713 996 aaKnown RBP2.11□□□□□ -2.07
SMD1YGR074W YHR054CP38780 354 aa2.11□□□□□ -2.07
SMD1YGR074W BZZ1P38822 633 aa2.11□□□□□ -2.07
SMD1YGR074W SEC28P40509 296 aaKnown RBP2.11□□□□□ -2.07
SMD1YGR074W YIR014WP40570 242 aa2.11□□□□□ -2.07
SMD1YGR074W LCB2P40970 561 aa2.11□□□□□ -2.07
SMD1YGR074W AZF1P41696 914 aa2.11□□□□□ -2.07
SMD1YGR074W SAD1P43589 448 aa2.11□□□□□ -2.07
SMD1YGR074W IRC15Q02733 499 aa2.11□□□□□ -2.07
SMD1YGR074W OAZ1Q02803 292 aa2.11□□□□□ -2.07
SMD1YGR074W TAP42Q04372 366 aa2.11□□□□□ -2.07
SMD1YGR074W HSP31Q04432 237 aa2.11□□□□□ -2.07
SMD1YGR074W HEL2Q05580 639 aaKnown RBP2.11□□□□□ -2.07
SMD1YGR074W VPS74Q06385 345 aa2.11□□□□□ -2.07
SMD1YGR074W PHO92Q06390 306 aa2.11□□□□□ -2.07
SMD1YGR074W SNA4Q07549 140 aa2.11□□□□□ -2.07
SMD1YGR074W DIS3Q08162 1001 aaKnown RBP2.11□□□□□ -2.07
SMD1YGR074W REX4Q08237 289 aa2.11□□□□□ -2.07
SMD1YGR074W NCE102Q12207 173 aaRIP-Chip data2.11□□□□□ -2.07not detected
SMD1YGR074W VAM3Q12241 283 aa2.11□□□□□ -2.07
SMD1YGR074W GPM3Q12326 303 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms