RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YCR007CP25354 239 aa2.88□□□□□ -1.95
SHS1YDL225W YUR1P26725 428 aa2.88□□□□□ -1.95
SHS1YDL225W FRE1P32791 686 aa2.88□□□□□ -1.95
SHS1YDL225W BYE1P36106 594 aa2.88□□□□□ -1.95
SHS1YDL225W YAT2P40017 923 aa2.88□□□□□ -1.95
SHS1YDL225W POP1P41812 875 aa2.88□□□□□ -1.95
SHS1YDL225W GPD2P41911 440 aaKnown RBP2.88□□□□□ -1.95
SHS1YDL225W MEP2P41948 499 aa2.88□□□□□ -1.95
SHS1YDL225W YGL108CP53139 140 aa2.88□□□□□ -1.95
SHS1YDL225W GPI1P53306 609 aa2.88□□□□□ -1.95
SHS1YDL225W YMR317WQ04893 1140 aa2.88□□□□□ -1.95
SHS1YDL225W RBS1Q05672 457 aaKnown RBP2.88□□□□□ -1.95
SHS1YDL225W SFI1Q12369 946 aa2.88□□□□□ -1.95
SHS1YDL225W SPB1P25582 841 aaPredicted RBP2.87□□□□□ -1.95
SHS1YDL225W BUD14P27637 709 aa2.87□□□□□ -1.95
SHS1YDL225W FUN19P28003 413 aaPredicted RBP2.87□□□□□ -1.95
SHS1YDL225W AFG1P32317 509 aa2.87□□□□□ -1.95
SHS1YDL225W LSM5P40089 93 aaKnown RBP2.87□□□□□ -1.95
SHS1YDL225W YMR147WP40218 223 aaKnown RBP2.87□□□□□ -1.95
SHS1YDL225W SYG1P40528 902 aa2.87□□□□□ -1.95
SHS1YDL225W VTC2P43585 828 aa2.87□□□□□ -1.95
SHS1YDL225W OCA1P50946 238 aaPredicted RBP2.87□□□□□ -1.95
SHS1YDL225W SPC19Q03954 165 aa2.87□□□□□ -1.95
SHS1YDL225W MRPL51Q06090 140 aaPredicted RBP2.87□□□□□ -1.95
SHS1YDL225W CFT2Q12102 859 aaPredicted RBP2.87□□□□□ -1.95
SHS1YDL225W YDL009CQ12210 107 aa2.87□□□□□ -1.95
SHS1YDL225W CAR1P00812 333 aaKnown RBP2.86□□□□□ -1.95
SHS1YDL225W YML002WP0CF17 737 aa2.86□□□□□ -1.95
SHS1YDL225W RPL3P14126 387 aaKnown RBP2.86□□□□□ -1.95
SHS1YDL225W EXO70P19658 623 aa2.86□□□□□ -1.95
SHS1YDL225W CLB3P24870 427 aa2.86□□□□□ -1.95
SHS1YDL225W YCR022CP25620 114 aa2.86□□□□□ -1.95
SHS1YDL225W RAD14P28519 371 aa2.86□□□□□ -1.95
SHS1YDL225W ATS1P31386 333 aa2.86□□□□□ -1.95
SHS1YDL225W HXT3P32466 567 aaKnown RBP2.86□□□□□ -1.95
SHS1YDL225W PTR2P32901 601 aa2.86□□□□□ -1.95
SHS1YDL225W MPE1P35728 441 aaKnown RBP2.86□□□□□ -1.95
SHS1YDL225W VMA13P41807 478 aaKnown RBP2.86□□□□□ -1.95
SHS1YDL225W YGR149WP48236 432 aa2.86□□□□□ -1.95
SHS1YDL225W YGL260WP53056 76 aa2.86□□□□□ -1.95
SHS1YDL225W YGR250CP53316 781 aaKnown RBP2.86□□□□□ -1.95
SHS1YDL225W RPA49Q01080 415 aaPredicted RBP2.86□□□□□ -1.95
SHS1YDL225W IRC15Q02733 499 aa2.86□□□□□ -1.95
SHS1YDL225W VTA1Q06263 330 aa2.86□□□□□ -1.95
SHS1YDL225W TIP41Q12199 356 aa2.86□□□□□ -1.95
SHS1YDL225W RKM5Q12367 367 aa2.86□□□□□ -1.95
SHS1YDL225W MTF1P14908 341 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W PPH22P23595 377 aa2.85□□□□□ -1.95
SHS1YDL225W IDH2P28241 369 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W ATP11P32453 318 aa2.85□□□□□ -1.95
SHS1YDL225W NDC1P32500 655 aa2.85□□□□□ -1.95
SHS1YDL225W NFU1P32860 256 aa2.85□□□□□ -1.95
SHS1YDL225W THI2P38141 450 aa2.85□□□□□ -1.95
SHS1YDL225W RTT101P47050 842 aa2.85□□□□□ -1.95
SHS1YDL225W HCR1Q05775 265 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
SHS1YDL225W KEL3Q08979 651 aaPredicted RBP2.85□□□□□ -1.95
SHS1YDL225W LSP1Q12230 341 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W RPL15AP05748 204 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W RHO2P06781 192 aa2.85□□□□□ -1.95
SHS1YDL225W BUB3P26449 341 aa2.85□□□□□ -1.95
SHS1YDL225W MFT1P33441 392 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W HCS1P34243 683 aa2.85□□□□□ -1.95
SHS1YDL225W MTC4P38335 694 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W FAU1P40099 211 aa2.85□□□□□ -1.95
SHS1YDL225W DLD2P46681 530 aaKnown RBP2.85□□□□□ -1.95
SHS1YDL225W URB2P47108 1174 aa2.85□□□□□ -1.95
SHS1YDL225W CRZ1P53968 678 aa2.85□□□□□ -1.95
SHS1YDL225W VPS74Q06385 345 aa2.85□□□□□ -1.95
SHS1YDL225W ATP10P18496 279 aa2.84□□□□□ -1.95
SHS1YDL225W YIM1P28625 365 aa2.84□□□□□ -1.95
SHS1YDL225W SPC110P32380 944 aa2.84□□□□□ -1.95
SHS1YDL225W TUL1P36096 758 aa2.84□□□□□ -1.95
SHS1YDL225W CBP4P37267 147 aa2.84□□□□□ -1.95
SHS1YDL225W DHH1P39517 506 aaKnown RBP2.84□□□□□ -1.95
SHS1YDL225W SHO1P40073 367 aa2.84□□□□□ -1.95
SHS1YDL225W RPR2P40571 144 aa2.84□□□□□ -1.95
SHS1YDL225W YFR016CP43597 1233 aaKnown RBP2.84□□□□□ -1.95
SHS1YDL225W RMD9P53140 646 aaKnown RBP2.84□□□□□ -1.95
SHS1YDL225W MNP1P53163 194 aaPredicted RBP2.84□□□□□ -1.95
SHS1YDL225W GIR2Q03768 265 aaPredicted RBP2.84□□□□□ -1.95
SHS1YDL225W RRD2Q12461 358 aa2.84□□□□□ -1.95
SHS1YDL225W LEU4P06208 619 aaKnown RBP2.83□□□□□ -1.96
SHS1YDL225W SPS4P09937 338 aa2.83□□□□□ -1.96
SHS1YDL225W CLC1P17891 233 aa2.83□□□□□ -1.96
SHS1YDL225W PRO3P32263 286 aaKnown RBP2.83□□□□□ -1.96
SHS1YDL225W RML2P32611 393 aa2.83□□□□□ -1.96
SHS1YDL225W FMP46P36141 133 aaKnown RBP2.83□□□□□ -1.96
SHS1YDL225W RPH1P39956 796 aa2.83□□□□□ -1.96
SHS1YDL225W ARX1Q03862 593 aaKnown RBP2.83□□□□□ -1.96
SHS1YDL225W ERP1Q05359 219 aaKnown RBP2.83□□□□□ -1.96
SHS1YDL225W AYT1Q12226 474 aa2.83□□□□□ -1.96
SHS1YDL225W SET6Q12529 373 aa2.83□□□□□ -1.96
SHS1YDL225W LOS1P33418 1100 aaPredicted RBP2.82□□□□□ -1.96
SHS1YDL225W FRE2P36033 711 aa2.82□□□□□ -1.96
SHS1YDL225W HAT2P39984 401 aa2.82□□□□□ -1.96
SHS1YDL225W SSU1P41930 458 aa2.82□□□□□ -1.96
SHS1YDL225W ELP2P42935 788 aa2.82□□□□□ -1.96
SHS1YDL225W GWT1P47026 490 aa2.82□□□□□ -1.96
SHS1YDL225W KTR5P53966 522 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms