RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RFPL3O75679 317 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 BCL6P41182 706 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 CORO7P57737 925 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 GPR85P60893 370 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 PABPC4Q13310 644 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 SNX17Q15036 470 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 LBX2Q6XYB7 198 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 FGD2Q7Z6J4 655 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 NLRP10Q86W26 655 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 SIRT2Q8IXJ6 389 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 IFNL3Q8IZI9 196 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 NUP43Q8NFH3 380 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 RNF32Q9H0A6 362 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 PPARGC1AQ9UBK2 798 aaKnown RBP6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 NDOR1Q9UHB4 597 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 GPR160Q9UJ42 338 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 RWDD3Q9Y3V2 267 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 TAF6LQ9Y6J9 622 aa6.65□□□□□ -1.34
HMGB3P6-201ENST00000444896 PAPLNO95428 1278 aa6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 ITGB5P18084 799 aa6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 SDSP20132 328 aa6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 DALRD3Q5D0E6 543 aaKnown RBP6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 KIRREL1Q96J84 757 aa6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 FEZ1Q99689 392 aa6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 PCDHA9Q9Y5H5 950 aa6.64□□□□□ -1.35
HMGB3P6-201ENST00000444896 AQP7O14520 342 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 EFCAB14O75071 495 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 CRTAMO95727 393 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 PNLIPP16233 465 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 GYS2P54840 703 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 RPL11P62913 178 aaKnown RBP6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 LSAMPQ13449 338 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 KCNMB1Q16558 191 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 ZNF662Q6ZS27 426 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 CEP68Q76N32 757 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 BRAPQ7Z569 592 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 TEX2Q8IWB9 1127 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 Q8N1Y9 231 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 CRTAC1Q9NQ79 661 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 PDLIM7Q9NR12 457 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 MARCH2Q9P0N8 246 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 SFMBT1Q9UHJ3 866 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 YBX2Q9Y2T7 364 aaKnown RBP6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 PCDHA8Q9Y5H6 950 aa6.63□□□□□ -1.35
HMGB3P6-201ENST00000444896 NISCHQ9Y2I1 1504 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 CARMIL2Q6F5E8 1435 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 SBNO2Q9Y2G9 1366 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 DNAJC8O75937 253 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 RASGRP1O95267 797 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 FUCA1P04066 466 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 KCNA6P17658 529 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 FPR2P25090 351 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 TACR1P25103 407 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 GTF2A2P52657 109 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 CYP4F8P98187 520 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 FAM177A1Q8N128 213 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 FAM168AQ92567 244 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 NINJ1Q92982 152 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 BTG4Q9NY30 223 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 X6R8D5 127 aa6.62□□□□□ -1.35
HMGB3P6-201ENST00000444896 A0A1W2PQ27 194 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 A0A1W2PQ64 194 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 A0A1W2PQC6 194 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 A0A1W2PQD8 194 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 H7BY64 318 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 ARVCFO00192 962 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 MYO1BO43795 1136 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 ZSWIM9Q86XI8 627 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 CLDND1Q9NY35 253 aa6.61□□□□□ -1.35
HMGB3P6-201ENST00000444896 TCRBV16S1A1N1A0A5B0 115 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 FAM83GA6ND36 823 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 C22orf46C9J442 243 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 SOD2P04179 222 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 GLI1P08151 1106 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 GLI4P10075 376 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 GUCY1A3Q02108 690 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 KIZQ2M2Z5 673 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 DHX37Q8IY37 1157 aaKnown RBP6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 PCDH19Q8TAB3 1148 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 TMEM169Q96HH4 297 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 CHAMP1Q96JM3 812 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 MAGEB10Q96LZ2 347 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 JAM3Q9BX67 310 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 IPPKQ9H8X2 491 aa6.6□□□□□ -1.35
HMGB3P6-201ENST00000444896 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 NTRK1P04629 796 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 CKMP06732 381 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 DBHP09172 617 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 SDHBP21912 280 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 ERVFRD-1P60508 538 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 TM4SF20Q53R12 229 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 ABHD17CQ6PCB6 329 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms