RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 CEP68Q76N32 757 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 MAMDC2Q7Z304 686 aaPredicted RBP6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 TEX2Q8IWB9 1127 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 LILRA2Q8N149 483 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 GSTCDQ8NEC7 633 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 CHAMP1Q96JM3 812 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 MARCH2Q9P0N8 246 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 PCDHA8Q9Y5H6 950 aa6.27□□□□□ -1.41
RNU6-560P-201ENST00000364007 FUCA1P04066 466 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 SDSP20132 328 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 SDHBP21912 280 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 GYS2P54840 703 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 GPR85P60893 370 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 CYP4F8P98187 520 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 LBX2Q6XYB7 198 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 BRAPQ7Z569 592 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 ATG4DQ86TL0 474 aaPredicted RBP6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 NLRP10Q86W26 655 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 DHX37Q8IY37 1157 aaKnown RBP6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 PLEKHO2Q8TD55 490 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 KIRREL1Q96J84 757 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 MTA3Q9BTC8 594 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 TRIM39Q9HCM9 518 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 SFMBT1Q9UHJ3 866 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 SBNO2Q9Y2G9 1366 aa6.26□□□□□ -1.41
RNU6-560P-201ENST00000364007 AQP7O14520 342 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 KCNQ2O43526 872 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 RASGRP1O95267 797 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 FPR2P25090 351 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 GUCY1A3Q02108 690 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 LSAMPQ13449 338 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 SNX17Q15036 470 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 SYNPOQ8N3V7 929 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 USP33Q8TEY7 942 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 FEZ1Q99689 392 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 ZFYVE21Q9BQ24 234 aa6.25□□□□□ -1.41
RNU6-560P-201ENST00000364007 C22orf46C9J442 243 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 MYO1BO43795 1136 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 EFCAB14O75071 495 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 RFPL3O75679 317 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 PAPLNO95428 1278 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 PNLIPP16233 465 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 CORO7P57737 925 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 MTDHQ86UE4 582 aaKnown RBP6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 LZTR1Q8N653 840 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 TRMT2BQ96GJ1 504 aaKnown RBP6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 TMEM169Q96HH4 297 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 MAGEB10Q96LZ2 347 aaPredicted RBP6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 JAM3Q9BX67 310 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 CDIP1Q9H305 208 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 PDLIM7Q9NR12 457 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 CLDND1Q9NY35 253 aa6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU6-560P-201ENST00000364007 IRS4O14654 1257 aaPredicted RBP6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 DNAJC8O75937 253 aaPredicted RBP6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 CLSTN1O94985 981 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 SOD2P04179 222 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 SRGAP2CP0DJJ0 459 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 GTF2A2P52657 109 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 BICRALQ6AI39 1079 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 PCDH19Q8TAB3 1148 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 NINJ1Q92982 152 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 KCNJ15Q99712 375 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 IPPKQ9H8X2 491 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 RXFP1Q9HBX9 757 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 CRTAC1Q9NQ79 661 aa6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 YBX2Q9Y2T7 364 aaKnown RBP6.23□□□□□ -1.41
RNU6-560P-201ENST00000364007 A0A1W2PQJ5 194 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 TCRBV16S1A1N1A0A5B0 115 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 NTRK1P04629 796 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 KCNA6P17658 529 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 ZNF460Q14592 562 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 NIM1KQ8IY84 436 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 TNPO3Q9Y5L0 923 aaKnown RBP6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 CARMIL2Q6F5E8 1435 aa6.22□□□□□ -1.41
RNU6-560P-201ENST00000364007 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 H7BY64 318 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ARVCFO00192 962 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 BIN1O00499 593 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 GLI1P08151 1106 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 COL6A2P12110 1019 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ITGB5P18084 799 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 IRAK1P51617 712 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 PAK1Q13153 545 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 KIZQ2M2Z5 673 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ADGRF1Q5T601 910 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 CNNM4Q6P4Q7 775 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ABHD17CQ6PCB6 329 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZSWIM9Q86XI8 627 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 FAM168AQ92567 244 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 INTS4Q96HW7 963 aaKnown RBP6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms