RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 BBC1P47068 1157 aa-0.33□□□□□ -2.46
snR87snR87 GSF2Q04697 403 aaKnown RBP-0.33□□□□□ -2.46
snR87snR87 HDA2Q06629 674 aa-0.33□□□□□ -2.46
snR87snR87 MPC54Q08550 464 aa-0.33□□□□□ -2.46
snR87snR87 MCA1Q08601 432 aa-0.33□□□□□ -2.46
snR87snR87 MMP1Q12372 583 aa-0.33□□□□□ -2.46
snR87snR87 MIP1P15801 1254 aa-0.34□□□□□ -2.46
snR87snR87 IOC3P43596 787 aa-0.34□□□□□ -2.46
snR87snR87 FRK1Q03002 865 aaPredicted RBP-0.34□□□□□ -2.46
snR87snR87 BDF2Q07442 638 aa-0.34□□□□□ -2.46
snR87snR87 MET32Q12041 191 aa-0.34□□□□□ -2.46
snR87snR87 TAT1P38085 619 aa-0.35□□□□□ -2.47
snR87snR87 DBP1P24784 617 aaKnown RBP-0.36□□□□□ -2.47
snR87snR87 RNQ1P25367 405 aa-0.36□□□□□ -2.47
snR87snR87 TAF1P46677 1066 aa-0.36□□□□□ -2.47
snR87snR87 YDR215CQ12240 137 aa-0.36□□□□□ -2.47
snR87snR87 SLN1P39928 1220 aaPredicted RBP-0.37□□□□□ -2.47
snR87snR87 SBE2P42223 864 aaKnown RBP-0.37□□□□□ -2.47
snR87snR87 ROG3P43602 733 aa-0.37□□□□□ -2.47
snR87snR87 TY1A-MR1Q04215 440 aa-0.37□□□□□ -2.47
snR87snR87 YMR1P47147 688 aaKnown RBP RIP-Chip data-0.38□□□□□ -2.47not detected
snR87snR87 MSB3P48566 633 aaPredicted RBP-0.38□□□□□ -2.47
snR87snR87 YLR358CO13565 187 aa-0.39□□□□□ -2.47
snR87snR87 CCP1P00431 361 aa-0.39□□□□□ -2.47
snR87snR87 PRT1P06103 763 aaKnown RBP-0.39□□□□□ -2.47
snR87snR87 YUR1P26725 428 aa-0.39□□□□□ -2.47
snR87snR87 SCS3P53012 380 aa-0.39□□□□□ -2.47
snR87snR87 YNR014WP53719 212 aa-0.39□□□□□ -2.47
snR87snR87 ADE12P80210 433 aaKnown RBP-0.39□□□□□ -2.47
snR87snR87 TYW1Q08960 810 aaKnown RBP-0.39□□□□□ -2.47
snR87snR87 SRF1Q12516 437 aa-0.39□□□□□ -2.47
snR87snR87 LIP5P32875 414 aa-0.4□□□□□ -2.47
snR87snR87 NIT1P40447 199 aa-0.4□□□□□ -2.47
snR87snR87 NUP85P46673 744 aa-0.4□□□□□ -2.47
snR87snR87 BDP1P46678 594 aa-0.4□□□□□ -2.47
snR87snR87 UBP2Q01476 1272 aa-0.4□□□□□ -2.47
snR87snR87 YAP7Q08182 245 aa-0.4□□□□□ -2.47
snR87snR87 EMW1P42842 904 aaKnown RBP-0.41□□□□□ -2.48
snR87snR87 PTK2P47116 818 aaKnown RBP-0.41□□□□□ -2.48
snR87snR87 YGR130CP53278 816 aa-0.41□□□□□ -2.48
snR87snR87 DPL1Q05567 589 aa-0.41□□□□□ -2.48
snR87snR87 ISU2Q12056 156 aa-0.42□□□□□ -2.48
snR87snR87 ICT1Q12385 394 aa-0.42□□□□□ -2.48
snR87snR87 GIS2P53849 153 aaKnown RBP RIP-Chip data-0.43□□□□□ -2.48not detected
snR87snR87 MED7Q08278 222 aa-0.43□□□□□ -2.48
snR87snR87 AI4P03878 556 aa-0.44□□□□□ -2.48
snR87snR87 MPH3P0CE00 602 aa-0.44□□□□□ -2.48
snR87snR87 SPT16P32558 1035 aaKnown RBP-0.44□□□□□ -2.48
snR87snR87 PUB1P32588 453 aaKnown RBP RIP-Chip data-0.44□□□□□ -2.48not detected
snR87snR87 UGA3P26370 528 aa-0.45□□□□□ -2.48
snR87snR87 OSH7P38755 437 aa-0.45□□□□□ -2.48
snR87snR87 BOI2P39969 1040 aa-0.45□□□□□ -2.48
snR87snR87 CTH1P47976 325 aa-0.45□□□□□ -2.48
snR87snR87 BUD20Q08004 166 aaPredicted RBP-0.45□□□□□ -2.48
snR87snR87 YBR056W-AI2HB52 66 aa-0.46□□□□□ -2.48
snR87snR87 PDR1P12383 1068 aa-0.46□□□□□ -2.48
snR87snR87 STB2P46679 850 aa-0.46□□□□□ -2.48
snR87snR87 BRE4Q07660 1125 aa-0.46□□□□□ -2.48
snR87snR87 AFT2Q08957 416 aa-0.46□□□□□ -2.48
snR87snR87 YKR073CP36153 106 aa-0.47□□□□□ -2.48
snR87snR87 ABZ1P37254 787 aaPredicted RBP-0.47□□□□□ -2.48
snR87snR87 TOS1P38288 455 aa-0.47□□□□□ -2.48
snR87snR87 STS1P38637 319 aa-0.47□□□□□ -2.48
snR87snR87 MNN10P50108 393 aaKnown RBP-0.47□□□□□ -2.48
snR87snR87 ARI1P53111 347 aaKnown RBP-0.47□□□□□ -2.48
snR87snR87 PRP43P53131 767 aaKnown RBP-0.47□□□□□ -2.48
snR87snR87 LSC2P53312 427 aa-0.47□□□□□ -2.48
snR87snR87 NST1P53935 1240 aa-0.47□□□□□ -2.48
snR87snR87 TBF1Q02457 562 aa-0.47□□□□□ -2.48
snR87snR87 GRE2Q12068 342 aaKnown RBP-0.47□□□□□ -2.48
snR87snR87 AI2P03876 854 aa-0.48□□□□□ -2.49
snR87snR87 TY1A-HP0C2I4 478 aaKnown RBP-0.48□□□□□ -2.49
snR87snR87 LSB5P25369 354 aa-0.48□□□□□ -2.49
snR87snR87 TMT1P32643 299 aa-0.48□□□□□ -2.49
snR87snR87 SEG2P34250 1132 aa-0.48□□□□□ -2.49
snR87snR87 CEM1P39525 442 aa-0.48□□□□□ -2.49
snR87snR87 UBP7P40453 1071 aa-0.48□□□□□ -2.49
snR87snR87 SEC5P89102 971 aa-0.48□□□□□ -2.49
snR87snR87 MET1P36150 593 aa-0.49□□□□□ -2.49
snR87snR87 ATF1P40353 525 aa-0.49□□□□□ -2.49
snR87snR87 PRY1P47032 299 aa-0.49□□□□□ -2.49
snR87snR87 TRP3P00937 484 aa-0.5□□□□□ -2.49
snR87snR87 TUB2P02557 457 aaKnown RBP-0.5□□□□□ -2.49
snR87snR87 ATS1P31386 333 aa-0.5□□□□□ -2.49
snR87snR87 FLR1P38124 548 aa-0.5□□□□□ -2.49
snR87snR87 STE4P18851 423 aa-0.51□□□□□ -2.49
snR87snR87 VPS29P38759 282 aa-0.51□□□□□ -2.49
snR87snR87 DIP2Q12220 943 aaPredicted RBP-0.51□□□□□ -2.49
snR87snR87 GUT1P32190 709 aa-0.52□□□□□ -2.49
snR87snR87 KAE1P36132 386 aa-0.52□□□□□ -2.49
snR87snR87 ECL1P48235 211 aa-0.52□□□□□ -2.49
snR87snR87 LGE1Q02796 332 aaKnown RBP-0.52□□□□□ -2.49
snR87snR87 MAG2Q06436 670 aaKnown RBP-0.52□□□□□ -2.49
snR87snR87 TCB1Q12466 1186 aa-0.52□□□□□ -2.49
snR87snR87 PAT1P25644 796 aaKnown RBP-0.53□□□□□ -2.49
snR87snR87 PGM1P33401 570 aaKnown RBP-0.53□□□□□ -2.49
snR87snR87 ILV3P39522 585 aaKnown RBP-0.53□□□□□ -2.49
snR87snR87 RTT106P40161 455 aa-0.53□□□□□ -2.49
snR87snR87 CUZ1P53899 274 aa-0.53□□□□□ -2.49
snR87snR87 GAS1P22146 559 aaKnown RBP-0.54□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms