RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 NPL4P33755 580 aa3.09□□□□□ -1.91
snR53snR53 RRN7P40992 514 aa3.09□□□□□ -1.91
snR53snR53 OPT2Q06593 877 aa3.09□□□□□ -1.91
snR53snR53 PHM7Q12252 991 aa3.09□□□□□ -1.91
snR53snR53 SBP1P10080 294 aaKnown RBP3.08□□□□□ -1.92
snR53snR53 SEC2P17065 759 aa3.08□□□□□ -1.92
snR53snR53 MDJ1P35191 511 aa3.08□□□□□ -1.92
snR53snR53 TY1A-DR4O74302 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-HP0C2I4 478 aaKnown RBP3.07□□□□□ -1.92
snR53snR53 TY1A-AP0CX57 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-PR1P0CX58 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-ORP0CX59 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-PR2P0CX60 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-DR5P0CX65 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-ER2P0CX66 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-GR3P0CX67 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-LR1P0CX68 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-MR2P0CX69 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-JR2P47099 440 aa3.07□□□□□ -1.92
snR53snR53 PEX21P50091 288 aa3.07□□□□□ -1.92
snR53snR53 TY1A-DR1Q03856 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-ML1Q04706 440 aaKnown RBP3.07□□□□□ -1.92
snR53snR53 TY1A-BRQ12217 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-NL2Q12470 440 aa3.07□□□□□ -1.92
snR53snR53 TY1A-GR2Q12485 440 aa3.07□□□□□ -1.92
snR53snR53 YLR346CQ06139 101 aa3.06□□□□□ -1.92
snR53snR53 PAT1P25644 796 aaKnown RBP3.05□□□□□ -1.92
snR53snR53 NOP53Q12080 455 aaKnown RBP3.03□□□□□ -1.92
snR53snR53 CCT8P47079 568 aaKnown RBP3.02□□□□□ -1.93
snR53snR53 PUS5Q06244 254 aa3.02□□□□□ -1.93
snR53snR53 PCS60P38137 543 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
snR53snR53 SCW11P53189 542 aa3.01□□□□□ -1.93
snR53snR53 TUM1Q08686 304 aaKnown RBP3.01□□□□□ -1.93
snR53snR53 NSG2P53898 299 aa3□□□□□ -1.93
snR53snR53 YLR326WQ06170 240 aaKnown RBP3□□□□□ -1.93
snR53snR53 GLY1P37303 387 aaKnown RBP2.99□□□□□ -1.93
snR53snR53 MSB3P48566 633 aaPredicted RBP2.99□□□□□ -1.93
snR53snR53 SRF1Q12516 437 aa2.99□□□□□ -1.93
snR53snR53 RAD54P32863 898 aa2.98□□□□□ -1.93
snR53snR53 UBP14P38237 781 aaKnown RBP2.97□□□□□ -1.93
snR53snR53 VHR2P40041 505 aa2.97□□□□□ -1.93
snR53snR53 TY1A-BLQ12266 440 aa2.97□□□□□ -1.93
snR53snR53 PTK2P47116 818 aaKnown RBP2.96□□□□□ -1.94
snR53snR53 DPH6Q12429 685 aa2.96□□□□□ -1.94
snR53snR53 UGA3P26370 528 aa2.95□□□□□ -1.94
snR53snR53 TYW1Q08960 810 aaKnown RBP2.95□□□□□ -1.94
snR53snR53 MIP1P15801 1254 aa2.94□□□□□ -1.94
snR53snR53 THI72Q08579 599 aa2.94□□□□□ -1.94
snR53snR53 TFB4Q12004 338 aa2.94□□□□□ -1.94
snR53snR53 MOD5P07884 428 aa2.91□□□□□ -1.94
snR53snR53 NUP85P46673 744 aa2.9□□□□□ -1.95
snR53snR53 CSC1Q06538 782 aa2.9□□□□□ -1.95
snR53snR53 GAP1P19145 602 aaPredicted RBP2.89□□□□□ -1.95
snR53snR53 PAC1P39946 494 aaKnown RBP2.89□□□□□ -1.95
snR53snR53 YPR053CQ6Q5F3 151 aa2.87□□□□□ -1.95
snR53snR53 YFL066CP43538 392 aa2.86□□□□□ -1.95
snR53snR53 LYS5P50113 272 aa2.86□□□□□ -1.95
snR53snR53 ROG3P43602 733 aa2.85□□□□□ -1.95
snR53snR53 AI1P03875 834 aa2.84□□□□□ -1.95
snR53snR53 TFA1P36100 482 aa2.84□□□□□ -1.95
snR53snR53 JJJ3P47138 172 aa2.84□□□□□ -1.95
snR53snR53 UBP2Q01476 1272 aa2.84□□□□□ -1.95
snR53snR53 KEX2P13134 814 aa2.83□□□□□ -1.96
snR53snR53 KIC1P38692 1080 aa2.83□□□□□ -1.96
snR53snR53 TY1A-MR1Q04215 440 aa2.83□□□□□ -1.96
snR53snR53 ERF2Q06551 359 aa2.83□□□□□ -1.96
snR53snR53 IRC24P40580 263 aa2.82□□□□□ -1.96
snR53snR53 SYH1Q02875 849 aaKnown RBP2.82□□□□□ -1.96
snR53snR53 CCP1P00431 361 aa2.81□□□□□ -1.96
snR53snR53 SKN7P38889 622 aa2.81□□□□□ -1.96
snR53snR53 LSC2P53312 427 aa2.8□□□□□ -1.96
snR53snR53 MAC1P35192 417 aa2.79□□□□□ -1.96
snR53snR53 YPL034WQ03083 165 aa2.78□□□□□ -1.96
snR53snR53 YDR090CQ03193 310 aa2.78□□□□□ -1.96
snR53snR53 GLT1Q12680 2145 aaKnown RBP2.77□□□□□ -1.97
snR53snR53 OSH7P38755 437 aa2.77□□□□□ -1.97
snR53snR53 TUB4P53378 473 aa2.77□□□□□ -1.97
snR53snR53 YMR187CQ03236 431 aa2.77□□□□□ -1.97
snR53snR53 YPR109WQ06104 294 aa2.76□□□□□ -1.97
snR53snR53 TCB1Q12466 1186 aa2.76□□□□□ -1.97
snR53snR53 AGE1Q04412 482 aa2.75□□□□□ -1.97
snR53snR53 TDA6Q06466 467 aa2.75□□□□□ -1.97
snR53snR53 DLD1P32891 587 aa2.74□□□□□ -1.97
snR53snR53 MVP1P40959 511 aaKnown RBP2.74□□□□□ -1.97
snR53snR53 ARG82P07250 355 aa2.73□□□□□ -1.97
snR53snR53 YJR098CP47139 656 aa2.73□□□□□ -1.97
snR53snR53 ORC6P38826 435 aa2.72□□□□□ -1.97
snR53snR53 IFH1P39520 1085 aa2.72□□□□□ -1.97
snR53snR53 SBE2P42223 864 aaKnown RBP2.72□□□□□ -1.97
snR53snR53 KXD1P53158 218 aa2.72□□□□□ -1.97
snR53snR53 KIP2P28743 706 aa2.71□□□□□ -1.98
snR53snR53 AAD14P42884 376 aa2.71□□□□□ -1.98
snR53snR53 HXT10P43581 546 aa2.69□□□□□ -1.98
snR53snR53 TPD3P31383 635 aa2.68□□□□□ -1.98
snR53snR53 MRT4P33201 236 aaKnown RBP2.68□□□□□ -1.98
snR53snR53 AMN1P38285 549 aaPredicted RBP2.68□□□□□ -1.98
snR53snR53 RTT106P40161 455 aa2.68□□□□□ -1.98
snR53snR53 IXR1P33417 597 aa2.66□□□□□ -1.98
snR53snR53 RGR1P19263 1082 aa2.65□□□□□ -1.99
snR53snR53 LSB6P42951 607 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms