RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W SEC2P17065 759 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-DR4O74302 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-HP0C2I4 478 aaKnown RBP2.2□□□□□ -2.06
SEC8YPR055W TY1A-AP0CX57 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-PR1P0CX58 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-ORP0CX59 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-PR2P0CX60 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-DR5P0CX65 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-ER2P0CX66 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-GR3P0CX67 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-LR1P0CX68 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-MR2P0CX69 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-JR2P47099 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-DR1Q03856 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-ML1Q04706 440 aaKnown RBP2.2□□□□□ -2.06
SEC8YPR055W TY1A-BRQ12217 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-NL2Q12470 440 aa2.2□□□□□ -2.06
SEC8YPR055W TY1A-GR2Q12485 440 aa2.2□□□□□ -2.06
SEC8YPR055W NPL4P33755 580 aa2.2□□□□□ -2.06
SEC8YPR055W YNR021WP53723 404 aaKnown RBP2.2□□□□□ -2.06
SEC8YPR055W GYP1Q08484 637 aa2.2□□□□□ -2.06
SEC8YPR055W FPK1P53739 893 aa2.19□□□□□ -2.06
SEC8YPR055W YMR196WQ04336 1088 aa2.19□□□□□ -2.06
SEC8YPR055W YML082WQ04533 649 aaKnown RBP2.19□□□□□ -2.06
SEC8YPR055W KIN1P13185 1064 aa2.19□□□□□ -2.06
SEC8YPR055W ESS1P22696 170 aa2.18□□□□□ -2.06
SEC8YPR055W KTR1P27810 393 aaKnown RBP2.18□□□□□ -2.06
SEC8YPR055W RRN7P40992 514 aa2.18□□□□□ -2.06
SEC8YPR055W TRK1P12685 1235 aa2.18□□□□□ -2.06
SEC8YPR055W SDH2P21801 266 aa2.18□□□□□ -2.06
SEC8YPR055W SLY41P22215 453 aa2.18□□□□□ -2.06
SEC8YPR055W GAR1P28007 205 aaKnown RBP2.18□□□□□ -2.06
SEC8YPR055W YJU3P28321 313 aa2.18□□□□□ -2.06
SEC8YPR055W PRT1P06103 763 aaKnown RBP2.17□□□□□ -2.06
SEC8YPR055W GUA1P38625 525 aaKnown RBP2.17□□□□□ -2.06
SEC8YPR055W PAC1P39946 494 aaKnown RBP2.17□□□□□ -2.06
SEC8YPR055W RAS1P01119 309 aa2.16□□□□□ -2.06
SEC8YPR055W RPN1P38764 993 aaKnown RBP2.16□□□□□ -2.06
SEC8YPR055W CLB5P30283 435 aa2.16□□□□□ -2.06
SEC8YPR055W TUB4P53378 473 aa2.16□□□□□ -2.06
SEC8YPR055W CSN12P47130 423 aa2.16□□□□□ -2.06
SEC8YPR055W AIM7Q12156 149 aa2.16□□□□□ -2.06
SEC8YPR055W YNL115CP53925 644 aa2.15□□□□□ -2.06
SEC8YPR055W FRK1Q03002 865 aaPredicted RBP2.15□□□□□ -2.06
SEC8YPR055W PKH3Q03306 898 aaPredicted RBP2.15□□□□□ -2.06
SEC8YPR055W AGE1Q04412 482 aa2.15□□□□□ -2.06
SEC8YPR055W MMP1Q12372 583 aa2.15□□□□□ -2.06
SEC8YPR055W SIT4P20604 311 aa2.15□□□□□ -2.07
SEC8YPR055W GLN1P32288 370 aaKnown RBP2.14□□□□□ -2.07
SEC8YPR055W SPT16P32558 1035 aaKnown RBP2.14□□□□□ -2.07
SEC8YPR055W CST6P40535 587 aa2.14□□□□□ -2.07
SEC8YPR055W CLA4P48562 842 aa2.14□□□□□ -2.07
SEC8YPR055W ITT1Q04638 464 aa2.14□□□□□ -2.07
SEC8YPR055W TRM1P15565 570 aaKnown RBP2.14□□□□□ -2.07
SEC8YPR055W ARG8P18544 423 aa2.14□□□□□ -2.07
SEC8YPR055W PUS5Q06244 254 aa2.14□□□□□ -2.07
SEC8YPR055W PKC1P24583 1151 aa2.14□□□□□ -2.07
SEC8YPR055W HST2P53686 357 aa2.14□□□□□ -2.07
SEC8YPR055W YDL206WQ12424 762 aa2.14□□□□□ -2.07
SEC8YPR055W BDP1P46678 594 aa2.13□□□□□ -2.07
SEC8YPR055W TBF1Q02457 562 aa2.13□□□□□ -2.07
SEC8YPR055W AIR1P40507 360 aaKnown RBP2.12□□□□□ -2.07
SEC8YPR055W TFB3Q03290 321 aa2.12□□□□□ -2.07
SEC8YPR055W ERG12P07277 443 aa2.12□□□□□ -2.07
SEC8YPR055W DMA2P53924 522 aa2.12□□□□□ -2.07
SEC8YPR055W RAD59Q12223 238 aa2.12□□□□□ -2.07
SEC8YPR055W RTF1P53064 558 aa2.12□□□□□ -2.07
SEC8YPR055W SAS4Q04003 481 aa2.12□□□□□ -2.07
SEC8YPR055W MTC5Q03897 1148 aa2.11□□□□□ -2.07
SEC8YPR055W PDC1P06169 563 aaKnown RBP2.11□□□□□ -2.07
SEC8YPR055W AMS1P22855 1083 aa2.11□□□□□ -2.07
SEC8YPR055W PAT1P25644 796 aaKnown RBP2.11□□□□□ -2.07
SEC8YPR055W LEO1P38439 464 aa2.1□□□□□ -2.07
SEC8YPR055W PUS6P53294 404 aa2.1□□□□□ -2.07
SEC8YPR055W LAM6Q08001 693 aa2.1□□□□□ -2.07
SEC8YPR055W RSC30P38781 883 aa2.1□□□□□ -2.07
SEC8YPR055W YEL077CQ3E7X8 1277 aa2.1□□□□□ -2.07
SEC8YPR055W MRF1P30775 413 aaPredicted RBP2.1□□□□□ -2.07
SEC8YPR055W MOD5P07884 428 aa2.09□□□□□ -2.07
SEC8YPR055W SSA2P10592 639 aaKnown RBP2.09□□□□□ -2.08
SEC8YPR055W YDJ1P25491 409 aaKnown RBP2.09□□□□□ -2.08
SEC8YPR055W HXT10P43581 546 aa2.09□□□□□ -2.08
SEC8YPR055W YJL007CP47080 104 aa2.09□□□□□ -2.08
SEC8YPR055W KXD1P53158 218 aa2.09□□□□□ -2.08
SEC8YPR055W ISF1P32488 338 aa2.08□□□□□ -2.08
SEC8YPR055W ALR1Q08269 859 aa2.08□□□□□ -2.08
SEC8YPR055W YBL036CP38197 257 aa2.08□□□□□ -2.08
SEC8YPR055W BRL1P38770 471 aa2.08□□□□□ -2.08
SEC8YPR055W RRD1P40454 393 aaKnown RBP2.08□□□□□ -2.08
SEC8YPR055W GCR2Q01722 534 aa2.08□□□□□ -2.08
SEC8YPR055W BIO2P32451 375 aa2.08□□□□□ -2.08
SEC8YPR055W RPA14P50106 137 aa2.08□□□□□ -2.08
SEC8YPR055W YNL108CP53929 270 aa2.08□□□□□ -2.08
SEC8YPR055W APP1P53933 587 aa2.08□□□□□ -2.08
SEC8YPR055W KIP2P28743 706 aa2.07□□□□□ -2.08
SEC8YPR055W YPR097WQ06839 1073 aa2.07□□□□□ -2.08
SEC8YPR055W ATG32P40458 529 aa2.06□□□□□ -2.08
SEC8YPR055W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SEC8YPR055W HPC2Q01448 625 aa2.06□□□□□ -2.08
SEC8YPR055W MET32Q12041 191 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms