RNA–Protein interactions for RNA: YPL040C

ISM1, Transcript of Mitochondrial isoleucyl-tRNA synthetase, yeast

Gene ISM1, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISM1	YPL040C	FPK1	P53739	893 aa		4.78	□□□□□ -1.64
ISM1	YPL040C	NNF1	P47149	201 aa		4.77	□□□□□ -1.65
ISM1	YPL040C	MVP1	P40959	511 aa	Known RBP	4.76	□□□□□ -1.65
ISM1	YPL040C	SCY1	P53009	804 aa		4.76	□□□□□ -1.65
ISM1	YPL040C	PPX1	P38698	397 aa		4.76	□□□□□ -1.65
ISM1	YPL040C	YCK3	P39962	524 aa		4.76	□□□□□ -1.65
ISM1	YPL040C	YRB30	P53107	440 aa	Predicted RBP	4.76	□□□□□ -1.65
ISM1	YPL040C	YHL050C	P38721	697 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	YHR219W	P38900	624 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	YJR107W	P47145	328 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	TPO2	P53283	614 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	CWC15	Q03772	175 aa	Known RBP	4.75	□□□□□ -1.65
ISM1	YPL040C	YEL077C	Q3E7X8	1277 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	SCJ1	P25303	377 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	YJU3	P28321	313 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	YJR008W	P47085	338 aa		4.75	□□□□□ -1.65
ISM1	YPL040C	SIT4	P20604	311 aa		4.74	□□□□□ -1.65
ISM1	YPL040C	SPT5	P27692	1063 aa	Known RBP	4.74	□□□□□ -1.65
ISM1	YPL040C	POL32	P47110	350 aa		4.74	□□□□□ -1.65
ISM1	YPL040C	MAK16	P10962	306 aa	Predicted RBP	4.74	□□□□□ -1.65
ISM1	YPL040C	ESS1	P22696	170 aa		4.74	□□□□□ -1.65
ISM1	YPL040C	UBX5	Q06682	500 aa		4.74	□□□□□ -1.65
ISM1	YPL040C	YOL098C	Q12496	1037 aa		4.74	□□□□□ -1.65
ISM1	YPL040C	GUT1	P32190	709 aa		4.73	□□□□□ -1.65
ISM1	YPL040C	SEC8	P32855	1065 aa		4.73	□□□□□ -1.65
ISM1	YPL040C	RAD54	P32863	898 aa		4.73	□□□□□ -1.65
ISM1	YPL040C	RNH70	P53331	553 aa		4.73	□□□□□ -1.65
ISM1	YPL040C	RTS3	P53289	263 aa		4.73	□□□□□ -1.65
ISM1	YPL040C	PKH3	Q03306	898 aa	Predicted RBP	4.73	□□□□□ -1.65
ISM1	YPL040C	IOC3	P43596	787 aa		4.72	□□□□□ -1.65
ISM1	YPL040C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
ISM1	YPL040C	CLB5	P30283	435 aa		4.72	□□□□□ -1.65
ISM1	YPL040C	MMP1	Q12372	583 aa		4.72	□□□□□ -1.65
ISM1	YPL040C	OSW7	P43611	510 aa		4.72	□□□□□ -1.65
ISM1	YPL040C	YOR238W	Q08634	303 aa		4.72	□□□□□ -1.65
ISM1	YPL040C	KIC1	P38692	1080 aa		4.71	□□□□□ -1.66
ISM1	YPL040C	VMA1	P17255	1071 aa	Known RBP	4.71	□□□□□ -1.66
ISM1	YPL040C	CIT2	P08679	460 aa		4.7	□□□□□ -1.66
ISM1	YPL040C	BUD6	P41697	788 aa		4.7	□□□□□ -1.66
ISM1	YPL040C	ECM23	Q02710	187 aa		4.7	□□□□□ -1.66
ISM1	YPL040C	MET4	P32389	672 aa		4.7	□□□□□ -1.66
ISM1	YPL040C	HAA1	Q12753	694 aa	Known RBP	4.7	□□□□□ -1.66
ISM1	YPL040C	OYE2	Q03558	400 aa	Known RBP	4.7	□□□□□ -1.66
ISM1	YPL040C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
ISM1	YPL040C	BOL3	P39724	118 aa		4.69	□□□□□ -1.66
ISM1	YPL040C	FRT1	Q99332	602 aa		4.69	□□□□□ -1.66
ISM1	YPL040C	MNL2	Q12205	849 aa		4.69	□□□□□ -1.66
ISM1	YPL040C	GAL2	P13181	574 aa		4.68	□□□□□ -1.66
ISM1	YPL040C	TOM20	P35180	183 aa		4.68	□□□□□ -1.66
ISM1	YPL040C	MAP2	P38174	421 aa	Known RBP	4.68	□□□□□ -1.66
ISM1	YPL040C	ATG1	P53104	897 aa		4.68	□□□□□ -1.66
ISM1	YPL040C	GRE2	Q12068	342 aa	Known RBP	4.68	□□□□□ -1.66
ISM1	YPL040C	ALD3	P54114	506 aa		4.68	□□□□□ -1.66
ISM1	YPL040C	TAT2	P38967	592 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	ATH1	P48016	1211 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	ALG12	P53730	551 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	SAM3	Q08986	587 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	ILV3	P39522	585 aa	Known RBP	4.67	□□□□□ -1.66
ISM1	YPL040C	UBP10	P53874	792 aa	Predicted RBP	4.67	□□□□□ -1.66
ISM1	YPL040C	NAF1	P53919	492 aa	Known RBP	4.67	□□□□□ -1.66
ISM1	YPL040C	RPN4	Q03465	531 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	MET1	P36150	593 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	PRY3	P47033	881 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	KAR5	Q04746	504 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	NUT2	Q06213	157 aa		4.67	□□□□□ -1.66
ISM1	YPL040C	ARG8	P18544	423 aa		4.66	□□□□□ -1.66
ISM1	YPL040C	ENP1	P38333	483 aa	Known RBP	4.66	□□□□□ -1.66
ISM1	YPL040C	PUF6	Q04373	656 aa	Known RBP	4.66	□□□□□ -1.66
ISM1	YPL040C	PDR1	P12383	1068 aa		4.66	□□□□□ -1.66
ISM1	YPL040C	GRX4	P32642	244 aa		4.66	□□□□□ -1.66
ISM1	YPL040C	GRS1	P38088	690 aa	Known RBP	4.65	□□□□□ -1.66
ISM1	YPL040C	UBX7	P38349	436 aa		4.65	□□□□□ -1.66
ISM1	YPL040C	FPR3	P38911	411 aa	Known RBP	4.65	□□□□□ -1.66
ISM1	YPL040C	FYV10	P40492	516 aa		4.65	□□□□□ -1.66
ISM1	YPL040C	SUB1	P54000	292 aa	Known RBP	4.65	□□□□□ -1.66
ISM1	YPL040C	SSF2	Q12153	453 aa	Predicted RBP	4.65	□□□□□ -1.66
ISM1	YPL040C	MCM16	Q12262	181 aa		4.65	□□□□□ -1.66
ISM1	YPL040C	RRP14	P36080	434 aa	Known RBP	4.65	□□□□□ -1.67
ISM1	YPL040C	BUD21	Q08492	214 aa	Predicted RBP	4.65	□□□□□ -1.67
ISM1	YPL040C	GIN4	Q12263	1142 aa		4.65	□□□□□ -1.67
ISM1	YPL040C	VAC8	P39968	578 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	VPS16	Q03308	798 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	PIN2	Q12057	282 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	ACF4	P47129	309 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	ROM1	P53046	1155 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	VPS72	Q03388	795 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	JIP5	Q06214	492 aa	Predicted RBP	4.64	□□□□□ -1.67
ISM1	YPL040C	GPI13	Q07830	1017 aa		4.64	□□□□□ -1.67
ISM1	YPL040C	APL6	P46682	809 aa		4.63	□□□□□ -1.67
ISM1	YPL040C	YPP1	P46951	817 aa		4.63	□□□□□ -1.67
ISM1	YPL040C	YMR196W	Q04336	1088 aa		4.63	□□□□□ -1.67
ISM1	YPL040C	NSE3	Q05541	303 aa		4.63	□□□□□ -1.67
ISM1	YPL040C	YPR109W	Q06104	294 aa		4.63	□□□□□ -1.67
ISM1	YPL040C	PMC1	P38929	1173 aa	Predicted RBP	4.63	□□□□□ -1.67
ISM1	YPL040C	CSC1	Q06538	782 aa		4.62	□□□□□ -1.67
ISM1	YPL040C	PNP1	Q05788	311 aa		4.62	□□□□□ -1.67
ISM1	YPL040C	AI4	P03878	556 aa		4.62	□□□□□ -1.67
ISM1	YPL040C	MPH3	P0CE00	602 aa		4.62	□□□□□ -1.67
ISM1	YPL040C	TSR4	P25040	408 aa		4.62	□□□□□ -1.67
ISM1	YPL040C	RTF1	P53064	558 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms