RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C PRT1P06103 763 aaKnown RBP7.96□□□□□ -1.14
RPB8YOR224C BUD20Q08004 166 aaPredicted RBP7.96□□□□□ -1.14
RPB8YOR224C SLY41P22215 453 aa7.94□□□□□ -1.14
RPB8YOR224C CSN12P47130 423 aa7.94□□□□□ -1.14
RPB8YOR224C GLN1P32288 370 aaKnown RBP7.93□□□□□ -1.14
RPB8YOR224C YNL115CP53925 644 aa7.93□□□□□ -1.14
RPB8YOR224C ERF2Q06551 359 aa7.93□□□□□ -1.14
RPB8YOR224C TYW1Q08960 810 aaKnown RBP7.93□□□□□ -1.14
RPB8YOR224C MMP1Q12372 583 aa7.93□□□□□ -1.14
RPB8YOR224C SCJ1P25303 377 aa7.92□□□□□ -1.14
RPB8YOR224C PAT1P25644 796 aaKnown RBP7.91□□□□□ -1.14
RPB8YOR224C SPT16P32558 1035 aaKnown RBP7.91□□□□□ -1.14
RPB8YOR224C SIT4P20604 311 aa7.9□□□□□ -1.14
RPB8YOR224C XDJ1P39102 459 aa7.9□□□□□ -1.14
RPB8YOR224C SAS4Q04003 481 aa7.9□□□□□ -1.14
RPB8YOR224C GUA1P38625 525 aaKnown RBP7.89□□□□□ -1.15
RPB8YOR224C RRN7P40992 514 aa7.89□□□□□ -1.15
RPB8YOR224C RTF1P53064 558 aa7.89□□□□□ -1.15
RPB8YOR224C HST2P53686 357 aa7.89□□□□□ -1.15
RPB8YOR224C SSA2P10592 639 aaKnown RBP7.88□□□□□ -1.15
RPB8YOR224C ESS1P22696 170 aa7.88□□□□□ -1.15
RPB8YOR224C SEC2P17065 759 aa7.87□□□□□ -1.15
RPB8YOR224C TY1A-DR4O74302 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-HP0C2I4 478 aaKnown RBP7.86□□□□□ -1.15
RPB8YOR224C TY1A-AP0CX57 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-PR1P0CX58 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-ORP0CX59 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-PR2P0CX60 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-DR5P0CX65 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-ER2P0CX66 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-GR3P0CX67 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-LR1P0CX68 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-MR2P0CX69 440 aa7.86□□□□□ -1.15
RPB8YOR224C MRF1P30775 413 aaPredicted RBP7.86□□□□□ -1.15
RPB8YOR224C TY1A-JR2P47099 440 aa7.86□□□□□ -1.15
RPB8YOR224C TBF1Q02457 562 aa7.86□□□□□ -1.15
RPB8YOR224C PKH3Q03306 898 aaPredicted RBP7.86□□□□□ -1.15
RPB8YOR224C TY1A-DR1Q03856 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-ML1Q04706 440 aaKnown RBP7.86□□□□□ -1.15
RPB8YOR224C TY1A-BRQ12217 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-NL2Q12470 440 aa7.86□□□□□ -1.15
RPB8YOR224C TY1A-GR2Q12485 440 aa7.86□□□□□ -1.15
RPB8YOR224C ERG12P07277 443 aa7.83□□□□□ -1.16
RPB8YOR224C TUB4P53378 473 aa7.83□□□□□ -1.16
RPB8YOR224C ARG8P18544 423 aa7.82□□□□□ -1.16
RPB8YOR224C KTR1P27810 393 aaKnown RBP7.82□□□□□ -1.16
RPB8YOR224C YJU3P28321 313 aa7.81□□□□□ -1.16
RPB8YOR224C HGH1P48362 394 aaKnown RBP7.81□□□□□ -1.16
RPB8YOR224C PUS6P53294 404 aa7.81□□□□□ -1.16
RPB8YOR224C BRL1P38770 471 aa7.8□□□□□ -1.16
RPB8YOR224C TRM1P15565 570 aaKnown RBP7.78□□□□□ -1.16
RPB8YOR224C PAC1P39946 494 aaKnown RBP7.78□□□□□ -1.16
RPB8YOR224C YEL077CQ3E7X8 1277 aa7.77□□□□□ -1.17
RPB8YOR224C HPC2Q01448 625 aa7.76□□□□□ -1.17
RPB8YOR224C TFB3Q03290 321 aa7.76□□□□□ -1.17
RPB8YOR224C AGE1Q04412 482 aa7.76□□□□□ -1.17
RPB8YOR224C RAD59Q12223 238 aa7.76□□□□□ -1.17
RPB8YOR224C DPS1P04802 557 aaKnown RBP7.75□□□□□ -1.17
RPB8YOR224C KXD1P53158 218 aa7.75□□□□□ -1.17
RPB8YOR224C LAM6Q08001 693 aa7.75□□□□□ -1.17
RPB8YOR224C YDL206WQ12424 762 aa7.75□□□□□ -1.17
RPB8YOR224C DMA2P53924 522 aa7.74□□□□□ -1.17
RPB8YOR224C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
RPB8YOR224C FRK1Q03002 865 aaPredicted RBP7.73□□□□□ -1.17
RPB8YOR224C ALR1Q08269 859 aa7.72□□□□□ -1.17
RPB8YOR224C SDH2P21801 266 aa7.69□□□□□ -1.18
RPB8YOR224C AMS1P22855 1083 aa7.69□□□□□ -1.18
RPB8YOR224C YBL036CP38197 257 aa7.69□□□□□ -1.18
RPB8YOR224C RPA14P50106 137 aa7.69□□□□□ -1.18
RPB8YOR224C RAS1P01119 309 aa7.68□□□□□ -1.18
RPB8YOR224C PKC1P24583 1151 aa7.68□□□□□ -1.18
RPB8YOR224C BDP1P46678 594 aa7.68□□□□□ -1.18
RPB8YOR224C HXT10P43581 546 aa7.67□□□□□ -1.18
RPB8YOR224C PDC1P06169 563 aaKnown RBP7.66□□□□□ -1.18
RPB8YOR224C RSC30P38781 883 aa7.66□□□□□ -1.18
RPB8YOR224C CST6P40535 587 aa7.66□□□□□ -1.18
RPB8YOR224C PUS5Q06244 254 aa7.64□□□□□ -1.19
RPB8YOR224C YPR097WQ06839 1073 aa7.64□□□□□ -1.19
RPB8YOR224C KIP2P28743 706 aa7.63□□□□□ -1.19
RPB8YOR224C YJL007CP47080 104 aa7.63□□□□□ -1.19
RPB8YOR224C MOD5P07884 428 aa7.61□□□□□ -1.19
RPB8YOR224C CSE4P36012 229 aa7.6□□□□□ -1.19
RPB8YOR224C RRD1P40454 393 aaKnown RBP7.6□□□□□ -1.19
RPB8YOR224C MAK16P10962 306 aaPredicted RBP7.58□□□□□ -1.2
RPB8YOR224C IXR1P33417 597 aa7.57□□□□□ -1.2
RPB8YOR224C RPL34BP40525 121 aaKnown RBP7.57□□□□□ -1.2
RPB8YOR224C SYH1Q02875 849 aaKnown RBP7.57□□□□□ -1.2
RPB8YOR224C TPD3P31383 635 aa7.56□□□□□ -1.2
RPB8YOR224C YNL108CP53929 270 aa7.55□□□□□ -1.2
RPB8YOR224C BIM1P40013 344 aa7.54□□□□□ -1.2
RPB8YOR224C TEC1P18412 486 aa7.53□□□□□ -1.2
RPB8YOR224C CLA4P48562 842 aa7.53□□□□□ -1.2
RPB8YOR224C HED1Q03937 162 aa7.53□□□□□ -1.2
RPB8YOR224C YDJ1P25491 409 aaKnown RBP7.52□□□□□ -1.21
RPB8YOR224C BIO2P32451 375 aa7.52□□□□□ -1.21
RPB8YOR224C SPT5P27692 1063 aaKnown RBP7.51□□□□□ -1.21
RPB8YOR224C AIR1P40507 360 aaKnown RBP7.51□□□□□ -1.21
RPB8YOR224C VAC17P25591 423 aa7.5□□□□□ -1.21
RPB8YOR224C ATG32P40458 529 aa7.5□□□□□ -1.21
RPB8YOR224C FIG4P42837 879 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 87.3 ms