RNA–Protein interactions for RNA: YOR108W

LEU9, Transcript of Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), yeastyeast

Gene LEU9, Length 1,815 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LEU9YOR108W PPH3P32345 308 aa12.28□□□□□ -0.44
LEU9YOR108W USO1P25386 1790 aa12.23□□□□□ -0.45
LEU9YOR108W CPS1P27614 576 aa12.23□□□□□ -0.45
LEU9YOR108W MLP1Q02455 1875 aaKnown RBP12.21□□□□□ -0.45
LEU9YOR108W YMR196WQ04336 1088 aa12.21□□□□□ -0.45
LEU9YOR108W PSK1P31374 1356 aa12.21□□□□□ -0.45
LEU9YOR108W MIF2P35201 549 aa12.21□□□□□ -0.46
LEU9YOR108W TY1B-NL2Q99337 1749 aaKnown RBP12.2□□□□□ -0.46
LEU9YOR108W YML133CQ03099 1374 aa12.2□□□□□ -0.46
LEU9YOR108W YLL067CQ07888 1374 aa12.2□□□□□ -0.46
LEU9YOR108W YLL066CQ99208 1374 aa12.2□□□□□ -0.46
LEU9YOR108W PRS1P32895 427 aaKnown RBP12.18□□□□□ -0.46
LEU9YOR108W LEU2P04173 364 aaPredicted RBP12.18□□□□□ -0.46
LEU9YOR108W THI12P42883 340 aa12.18□□□□□ -0.46
LEU9YOR108W THI5P43534 340 aa12.18□□□□□ -0.46
LEU9YOR108W THI11P47183 340 aa12.18□□□□□ -0.46
LEU9YOR108W THI13Q07748 340 aa12.18□□□□□ -0.46
LEU9YOR108W TRK1P12685 1235 aa12.17□□□□□ -0.46
LEU9YOR108W YEF3P16521 1044 aaKnown RBP12.16□□□□□ -0.46
LEU9YOR108W MTR4P47047 1073 aaKnown RBP12.13□□□□□ -0.47
LEU9YOR108W PDI1P17967 522 aaKnown RBP12.11□□□□□ -0.47
LEU9YOR108W KAR2P16474 682 aaKnown RBP12.1□□□□□ -0.47
LEU9YOR108W CSE4P36012 229 aa12.1□□□□□ -0.47
LEU9YOR108W RPS24AP0CX31 135 aaKnown RBP12.09□□□□□ -0.47
LEU9YOR108W RPS24BP0CX32 135 aaKnown RBP12.09□□□□□ -0.47
LEU9YOR108W RTF1P53064 558 aa12.09□□□□□ -0.47
LEU9YOR108W HIM1Q06674 414 aa12.08□□□□□ -0.48
LEU9YOR108W TAP42Q04372 366 aa12.07□□□□□ -0.48
LEU9YOR108W PAP2P53632 584 aaKnown RBP12.06□□□□□ -0.48
LEU9YOR108W YDL144CQ07589 356 aa12.05□□□□□ -0.48
LEU9YOR108W GAS4Q08271 471 aa12.05□□□□□ -0.48
LEU9YOR108W NOP2P40991 618 aaKnown RBP12.03□□□□□ -0.48
LEU9YOR108W ADE6P38972 1358 aaKnown RBP12.02□□□□□ -0.48
LEU9YOR108W GRX4P32642 244 aa12.02□□□□□ -0.49
LEU9YOR108W RTR1P40084 226 aaPredicted RBP12.01□□□□□ -0.49
LEU9YOR108W PRP43P53131 767 aaKnown RBP12.01□□□□□ -0.49
LEU9YOR108W DPS1P04802 557 aaKnown RBP12□□□□□ -0.49
LEU9YOR108W RPP0P05317 312 aaKnown RBP12□□□□□ -0.49
LEU9YOR108W VPS27P40343 622 aaKnown RBP12□□□□□ -0.49
LEU9YOR108W MPP10P47083 593 aaKnown RBP12□□□□□ -0.49
LEU9YOR108W RRP46P53256 223 aaPredicted RBP12□□□□□ -0.49
LEU9YOR108W AUS1Q08409 1394 aa12□□□□□ -0.49
LEU9YOR108W IOC4Q04213 475 aa12□□□□□ -0.49
LEU9YOR108W CDC45Q08032 650 aa12□□□□□ -0.49
LEU9YOR108W FUN12P39730 1002 aaKnown RBP11.97□□□□□ -0.49
LEU9YOR108W RVB2Q12464 471 aaKnown RBP11.96□□□□□ -0.49
LEU9YOR108W PRP45P28004 379 aaPredicted RBP11.94□□□□□ -0.5
LEU9YOR108W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.93□□□□□ -0.5not detected
LEU9YOR108W SNF2P22082 1703 aa11.93□□□□□ -0.5
LEU9YOR108W SUI2P20459 304 aaKnown RBP11.93□□□□□ -0.5
LEU9YOR108W PRP5P21372 849 aaPredicted RBP11.92□□□□□ -0.5
LEU9YOR108W PRD1P25375 712 aa11.91□□□□□ -0.5
LEU9YOR108W YFR006WP43590 535 aa11.9□□□□□ -0.5
LEU9YOR108W TY4B-HP0C2J7 1802 aa11.89□□□□□ -0.51
LEU9YOR108W TY4B-JP47024 1803 aa11.89□□□□□ -0.51
LEU9YOR108W RPO41P13433 1351 aaKnown RBP11.89□□□□□ -0.51
LEU9YOR108W PTP3P40048 928 aa11.89□□□□□ -0.51
LEU9YOR108W SAP155P43612 1002 aa11.89□□□□□ -0.51
LEU9YOR108W TPD3P31383 635 aa11.88□□□□□ -0.51
LEU9YOR108W THI22Q06490 572 aa11.88□□□□□ -0.51
LEU9YOR108W MSB3P48566 633 aaPredicted RBP11.86□□□□□ -0.51
LEU9YOR108W AKL1P38080 1108 aaKnown RBP11.86□□□□□ -0.51
LEU9YOR108W SLM3Q12093 417 aa11.84□□□□□ -0.51
LEU9YOR108W YRB30P53107 440 aaPredicted RBP11.83□□□□□ -0.52
LEU9YOR108W RTT109Q07794 436 aa11.82□□□□□ -0.52
LEU9YOR108W DSD1P53095 428 aa11.81□□□□□ -0.52
LEU9YOR108W TCB1Q12466 1186 aa11.8□□□□□ -0.52
LEU9YOR108W HSP104P31539 908 aaKnown RBP11.79□□□□□ -0.52
LEU9YOR108W HEF3P53978 1044 aaKnown RBP11.79□□□□□ -0.52
LEU9YOR108W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
LEU9YOR108W YRF1-2P40105 1681 aa11.78□□□□□ -0.52
LEU9YOR108W XKS1P42826 600 aa11.78□□□□□ -0.52
LEU9YOR108W ENT1Q12518 454 aa11.78□□□□□ -0.52
LEU9YOR108W YIL177CP40434 1758 aa11.77□□□□□ -0.53
LEU9YOR108W YJL225CP40889 1758 aa11.77□□□□□ -0.53
LEU9YOR108W REB1P21538 810 aa11.76□□□□□ -0.53
LEU9YOR108W FPR3P38911 411 aaKnown RBP11.76□□□□□ -0.53
LEU9YOR108W RRP5Q05022 1729 aaKnown RBP11.76□□□□□ -0.53
LEU9YOR108W YRF1-4O13559 1382 aa11.75□□□□□ -0.53
LEU9YOR108W RAD2P07276 1031 aa11.75□□□□□ -0.53
LEU9YOR108W DAL5P15365 543 aa11.75□□□□□ -0.53
LEU9YOR108W NTH2P35172 780 aa11.75□□□□□ -0.53
LEU9YOR108W YNL050CP53952 270 aa11.74□□□□□ -0.53
LEU9YOR108W RRT14P40470 206 aa11.74□□□□□ -0.53
LEU9YOR108W ZDS1P50111 915 aaKnown RBP11.74□□□□□ -0.53
LEU9YOR108W APP1P53933 587 aa11.74□□□□□ -0.53
LEU9YOR108W RCR1P38212 213 aa11.73□□□□□ -0.53
LEU9YOR108W AOS1Q06624 347 aa11.73□□□□□ -0.53
LEU9YOR108W YBR287WP38355 427 aa11.72□□□□□ -0.53
LEU9YOR108W APC1P53886 1748 aa11.72□□□□□ -0.53
LEU9YOR108W TFA1P36100 482 aa11.72□□□□□ -0.53
LEU9YOR108W GYP7P48365 746 aa11.71□□□□□ -0.54
LEU9YOR108W ENV9Q08651 330 aa11.71□□□□□ -0.54
LEU9YOR108W URB1P34241 1764 aaKnown RBP11.7□□□□□ -0.54
LEU9YOR108W FKS3Q04952 1785 aa11.7□□□□□ -0.54
LEU9YOR108W YIL092WP40497 633 aa11.7□□□□□ -0.54
LEU9YOR108W MAK21Q12176 1025 aaKnown RBP11.7□□□□□ -0.54
LEU9YOR108W MAM1P40065 302 aa11.69□□□□□ -0.54
LEU9YOR108W CTF4Q01454 927 aa11.69□□□□□ -0.54
LEU9YOR108W RSF2P46974 1380 aa11.68□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms