RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeastyeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN1YOL116W SAS4Q04003 481 aa6.44□□□□□ -1.38
MSN1YOL116W PRT1P06103 763 aaKnown RBP6.42□□□□□ -1.38
MSN1YOL116W GCD11P32481 527 aaKnown RBP6.42□□□□□ -1.38
MSN1YOL116W ISM1P48526 1002 aa6.41□□□□□ -1.38
MSN1YOL116W BUD20Q08004 166 aaPredicted RBP6.41□□□□□ -1.38
MSN1YOL116W YEL077CQ3E7X8 1277 aa6.41□□□□□ -1.38
MSN1YOL116W STR2P47164 639 aa6.4□□□□□ -1.38
MSN1YOL116W SDH2P21801 266 aa6.39□□□□□ -1.39
MSN1YOL116W YMR196WQ04336 1088 aa6.39□□□□□ -1.39
MSN1YOL116W MRF1P30775 413 aaPredicted RBP6.38□□□□□ -1.39
MSN1YOL116W RTF1P53064 558 aa6.38□□□□□ -1.39
MSN1YOL116W SIT4P20604 311 aa6.37□□□□□ -1.39
MSN1YOL116W PAT1P25644 796 aaKnown RBP6.37□□□□□ -1.39
MSN1YOL116W NIS1P53939 407 aa6.37□□□□□ -1.39
MSN1YOL116W YNL115CP53925 644 aa6.36□□□□□ -1.39
MSN1YOL116W KEX2P13134 814 aa6.35□□□□□ -1.39
MSN1YOL116W SPT16P32558 1035 aaKnown RBP6.35□□□□□ -1.39
MSN1YOL116W FPK1P53739 893 aa6.35□□□□□ -1.39
MSN1YOL116W KIN1P13185 1064 aa6.34□□□□□ -1.39
MSN1YOL116W GBP2P25555 427 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
MSN1YOL116W LEO1P38439 464 aa6.33□□□□□ -1.4
MSN1YOL116W BRE2P43132 505 aa6.33□□□□□ -1.4
MSN1YOL116W SEC2P17065 759 aa6.32□□□□□ -1.4
MSN1YOL116W GAR1P28007 205 aaKnown RBP6.32□□□□□ -1.4
MSN1YOL116W GLN1P32288 370 aaKnown RBP6.32□□□□□ -1.4
MSN1YOL116W HST2P53686 357 aa6.32□□□□□ -1.4
MSN1YOL116W GCR2Q01722 534 aa6.32□□□□□ -1.4
MSN1YOL116W TY1A-DR4O74302 440 aa6.31□□□□□ -1.4
MSN1YOL116W ERG12P07277 443 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-HP0C2I4 478 aaKnown RBP6.31□□□□□ -1.4
MSN1YOL116W TY1A-AP0CX57 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-PR1P0CX58 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-ORP0CX59 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-PR2P0CX60 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-DR5P0CX65 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-ER2P0CX66 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-GR3P0CX67 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-LR1P0CX68 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-MR2P0CX69 440 aa6.31□□□□□ -1.4
MSN1YOL116W SLY41P22215 453 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-JR2P47099 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-DR1Q03856 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-ML1Q04706 440 aaKnown RBP6.31□□□□□ -1.4
MSN1YOL116W TY1A-BRQ12217 440 aa6.31□□□□□ -1.4
MSN1YOL116W MMP1Q12372 583 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-NL2Q12470 440 aa6.31□□□□□ -1.4
MSN1YOL116W TY1A-GR2Q12485 440 aa6.31□□□□□ -1.4
MSN1YOL116W CSN12P47130 423 aa6.3□□□□□ -1.4
MSN1YOL116W ERF2Q06551 359 aa6.3□□□□□ -1.4
MSN1YOL116W RRN7P40992 514 aa6.29□□□□□ -1.4
MSN1YOL116W SSA2P10592 639 aaKnown RBP6.27□□□□□ -1.41
MSN1YOL116W PUS6P53294 404 aa6.26□□□□□ -1.41
MSN1YOL116W TUB4P53378 473 aa6.26□□□□□ -1.41
MSN1YOL116W SCJ1P25303 377 aa6.25□□□□□ -1.41
MSN1YOL116W TBF1Q02457 562 aa6.25□□□□□ -1.41
MSN1YOL116W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
MSN1YOL116W TYW1Q08960 810 aaKnown RBP6.24□□□□□ -1.41
MSN1YOL116W ESS1P22696 170 aa6.23□□□□□ -1.41
MSN1YOL116W KXD1P53158 218 aa6.23□□□□□ -1.41
MSN1YOL116W AGE1Q04412 482 aa6.22□□□□□ -1.41
MSN1YOL116W LAM6Q08001 693 aa6.22□□□□□ -1.41
MSN1YOL116W GUA1P38625 525 aaKnown RBP6.21□□□□□ -1.42
MSN1YOL116W PAC1P39946 494 aaKnown RBP6.21□□□□□ -1.42
MSN1YOL116W AIR1P40507 360 aaKnown RBP6.21□□□□□ -1.42
MSN1YOL116W PKH3Q03306 898 aaPredicted RBP6.21□□□□□ -1.42
MSN1YOL116W KTR1P27810 393 aaKnown RBP6.2□□□□□ -1.42
MSN1YOL116W TRM1P15565 570 aaKnown RBP6.19□□□□□ -1.42
MSN1YOL116W ARG8P18544 423 aa6.19□□□□□ -1.42
MSN1YOL116W YJU3P28321 313 aa6.19□□□□□ -1.42
MSN1YOL116W HGH1P48362 394 aaKnown RBP6.19□□□□□ -1.42
MSN1YOL116W ALR1Q08269 859 aa6.19□□□□□ -1.42
MSN1YOL116W RPA14P50106 137 aa6.18□□□□□ -1.42
MSN1YOL116W HPC2Q01448 625 aa6.18□□□□□ -1.42
MSN1YOL116W BRL1P38770 471 aa6.17□□□□□ -1.42
MSN1YOL116W FRK1Q03002 865 aaPredicted RBP6.17□□□□□ -1.42
MSN1YOL116W YDL206WQ12424 762 aa6.17□□□□□ -1.42
MSN1YOL116W MOD5P07884 428 aa6.16□□□□□ -1.42
MSN1YOL116W HXT10P43581 546 aa6.16□□□□□ -1.42
MSN1YOL116W BDP1P46678 594 aa6.16□□□□□ -1.42
MSN1YOL116W YPR097WQ06839 1073 aa6.16□□□□□ -1.42
MSN1YOL116W TPD3P31383 635 aa6.15□□□□□ -1.42
MSN1YOL116W MET22P32179 357 aa6.15□□□□□ -1.42
MSN1YOL116W CST6P40535 587 aa6.15□□□□□ -1.42
MSN1YOL116W RAD59Q12223 238 aa6.15□□□□□ -1.42
MSN1YOL116W PDC1P06169 563 aaKnown RBP6.14□□□□□ -1.43
MSN1YOL116W RSC30P38781 883 aa6.14□□□□□ -1.43
MSN1YOL116W CLA4P48562 842 aa6.14□□□□□ -1.43
MSN1YOL116W ENV9Q08651 330 aa6.14□□□□□ -1.43
MSN1YOL116W RRD1P40454 393 aaKnown RBP6.11□□□□□ -1.43
MSN1YOL116W HED1Q03937 162 aa6.11□□□□□ -1.43
MSN1YOL116W CDC4P07834 779 aa6.1□□□□□ -1.43
MSN1YOL116W CSE4P36012 229 aa6.1□□□□□ -1.43
MSN1YOL116W TFB3Q03290 321 aa6.1□□□□□ -1.43
MSN1YOL116W SYH1Q02875 849 aaKnown RBP6.09□□□□□ -1.43
MSN1YOL116W KIP2P28743 706 aa6.08□□□□□ -1.44
MSN1YOL116W YBL036CP38197 257 aa6.08□□□□□ -1.44
MSN1YOL116W PUS5Q06244 254 aa6.08□□□□□ -1.44
MSN1YOL116W YDR444WQ04093 687 aa6.06□□□□□ -1.44
MSN1YOL116W MAK16P10962 306 aaPredicted RBP6.05□□□□□ -1.44
MSN1YOL116W IXR1P33417 597 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms