RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeastyeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB4YOL112W PPH3P32345 308 aa13.12□□□□□ -0.31
MSB4YOL112W APP1P53933 587 aa13.09□□□□□ -0.31
MSB4YOL112W YAH1Q12184 172 aaKnown RBP13.09□□□□□ -0.31
MSB4YOL112W PSK1P31374 1356 aa13.05□□□□□ -0.32
MSB4YOL112W YRF1-2P40105 1681 aa13.05□□□□□ -0.32
MSB4YOL112W REB1P21538 810 aa13.04□□□□□ -0.32
MSB4YOL112W MLP1Q02455 1875 aaKnown RBP13.01□□□□□ -0.33
MSB4YOL112W ADE6P38972 1358 aaKnown RBP13□□□□□ -0.33
MSB4YOL112W CHZ1P40019 153 aaPredicted RBP12.99□□□□□ -0.33
MSB4YOL112W ENT1Q12518 454 aa12.97□□□□□ -0.33
MSB4YOL112W YIL177CP40434 1758 aa12.96□□□□□ -0.33
MSB4YOL112W YJL225CP40889 1758 aa12.96□□□□□ -0.33
MSB4YOL112W YML133CQ03099 1374 aa12.96□□□□□ -0.33
MSB4YOL112W YLL067CQ07888 1374 aa12.96□□□□□ -0.33
MSB4YOL112W YLL066CQ99208 1374 aa12.96□□□□□ -0.33
MSB4YOL112W PRP45P28004 379 aaPredicted RBP12.95□□□□□ -0.34
MSB4YOL112W ENV9Q08651 330 aa12.92□□□□□ -0.34
MSB4YOL112W YIL055CP40523 627 aaKnown RBP12.91□□□□□ -0.34
MSB4YOL112W LEU2P04173 364 aaPredicted RBP12.89□□□□□ -0.35
MSB4YOL112W PRP5P21372 849 aaPredicted RBP12.89□□□□□ -0.35
MSB4YOL112W POL5P39985 1022 aaKnown RBP12.89□□□□□ -0.35
MSB4YOL112W MTR4P47047 1073 aaKnown RBP12.87□□□□□ -0.35
MSB4YOL112W URB1P34241 1764 aaKnown RBP12.87□□□□□ -0.35
MSB4YOL112W RPS24AP0CX31 135 aaKnown RBP12.85□□□□□ -0.35
MSB4YOL112W RPS24BP0CX32 135 aaKnown RBP12.85□□□□□ -0.35
MSB4YOL112W CSE4P36012 229 aa12.85□□□□□ -0.35
MSB4YOL112W MSB3P48566 633 aaPredicted RBP12.85□□□□□ -0.35
MSB4YOL112W PRP43P53131 767 aaKnown RBP12.85□□□□□ -0.35
MSB4YOL112W FKS3Q04952 1785 aa12.85□□□□□ -0.35
MSB4YOL112W MHP1P43638 1398 aa12.84□□□□□ -0.35
MSB4YOL112W GLN1P32288 370 aaKnown RBP12.84□□□□□ -0.35
MSB4YOL112W FKH1P40466 484 aa12.84□□□□□ -0.35
MSB4YOL112W IMH1Q06704 911 aaKnown RBP12.84□□□□□ -0.35
MSB4YOL112W SCT1P32784 759 aa12.83□□□□□ -0.36
MSB4YOL112W YRF1-3P0CX14 1859 aa12.82□□□□□ -0.36
MSB4YOL112W YRF1-7P0CX15 1859 aa12.82□□□□□ -0.36
MSB4YOL112W YRF1-6P53819 1859 aa12.82□□□□□ -0.36
MSB4YOL112W RTG3P38165 486 aa12.82□□□□□ -0.36
MSB4YOL112W APC1P53886 1748 aa12.79□□□□□ -0.36
MSB4YOL112W PDS5Q04264 1277 aa12.77□□□□□ -0.37
MSB4YOL112W SLM3Q12093 417 aa12.77□□□□□ -0.37
MSB4YOL112W RSF2P46974 1380 aa12.74□□□□□ -0.37
MSB4YOL112W TCB1Q12466 1186 aa12.73□□□□□ -0.37
MSB4YOL112W YMR074CQ04773 145 aa12.72□□□□□ -0.37
MSB4YOL112W AUS1Q08409 1394 aa12.72□□□□□ -0.37
MSB4YOL112W PDI1P17967 522 aaKnown RBP12.71□□□□□ -0.38
MSB4YOL112W GAS4Q08271 471 aa12.71□□□□□ -0.38
MSB4YOL112W IES2P40154 320 aa12.7□□□□□ -0.38
MSB4YOL112W DPS1P04802 557 aaKnown RBP12.69□□□□□ -0.38
MSB4YOL112W NST1P53935 1240 aa12.67□□□□□ -0.38
MSB4YOL112W XKS1P42826 600 aa12.66□□□□□ -0.38
MSB4YOL112W RTF1P53064 558 aa12.66□□□□□ -0.38
MSB4YOL112W TAP42Q04372 366 aa12.65□□□□□ -0.38
MSB4YOL112W HIM1Q06674 414 aa12.65□□□□□ -0.38
MSB4YOL112W LEU3P08638 886 aa12.65□□□□□ -0.38
MSB4YOL112W DOT5P40553 215 aa12.65□□□□□ -0.38
MSB4YOL112W SNF2P22082 1703 aa12.63□□□□□ -0.39
MSB4YOL112W YEF3P16521 1044 aaKnown RBP12.63□□□□□ -0.39
MSB4YOL112W ROM2P51862 1356 aaKnown RBP12.62□□□□□ -0.39
MSB4YOL112W SEC3P33332 1336 aaKnown RBP12.61□□□□□ -0.39
MSB4YOL112W BUD31P25337 157 aaPredicted RBP12.6□□□□□ -0.39
MSB4YOL112W GRX4P32642 244 aa12.6□□□□□ -0.39
MSB4YOL112W FOX2Q02207 900 aaKnown RBP12.6□□□□□ -0.39
MSB4YOL112W ENP1P38333 483 aaKnown RBP12.59□□□□□ -0.39
MSB4YOL112W YKL133CP36066 463 aa12.58□□□□□ -0.4
MSB4YOL112W RPN11P43588 306 aaKnown RBP12.58□□□□□ -0.4
MSB4YOL112W PSD2P53037 1138 aaKnown RBP12.58□□□□□ -0.4
MSB4YOL112W TRK1P12685 1235 aa12.57□□□□□ -0.4
MSB4YOL112W KAR2P16474 682 aaKnown RBP12.56□□□□□ -0.4
MSB4YOL112W RIM15P43565 1770 aa12.55□□□□□ -0.4
MSB4YOL112W SIR4P11978 1358 aa12.55□□□□□ -0.4
MSB4YOL112W RCR1P38212 213 aa12.55□□□□□ -0.4
MSB4YOL112W YRF1-4O13559 1382 aa12.54□□□□□ -0.4
MSB4YOL112W RPO41P13433 1351 aaKnown RBP12.53□□□□□ -0.4
MSB4YOL112W COBP00163 385 aa12.52□□□□□ -0.41
MSB4YOL112W PRI1P10363 409 aa12.51□□□□□ -0.41
MSB4YOL112W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.5□□□□□ -0.41not detected
MSB4YOL112W ADE16P54113 591 aaKnown RBP12.5□□□□□ -0.41
MSB4YOL112W FRK1Q03002 865 aaPredicted RBP12.5□□□□□ -0.41
MSB4YOL112W YKR075CP36155 307 aa12.49□□□□□ -0.41
MSB4YOL112W NPR2P39923 615 aa12.49□□□□□ -0.41
MSB4YOL112W SPT7P35177 1332 aa12.49□□□□□ -0.41
MSB4YOL112W UBP1P25037 809 aa12.47□□□□□ -0.41
MSB4YOL112W PAP2P53632 584 aaKnown RBP12.46□□□□□ -0.41
MSB4YOL112W MEC3Q02574 474 aa12.46□□□□□ -0.42
MSB4YOL112W EDE1P34216 1381 aa12.46□□□□□ -0.42
MSB4YOL112W LAM6Q08001 693 aa12.45□□□□□ -0.42
MSB4YOL112W YJL181WP46987 611 aa12.44□□□□□ -0.42
MSB4YOL112W LYS4P49367 693 aaPredicted RBP12.43□□□□□ -0.42
MSB4YOL112W DSD1P53095 428 aa12.43□□□□□ -0.42
MSB4YOL112W RRP46P53256 223 aaPredicted RBP12.43□□□□□ -0.42
MSB4YOL112W INP54Q08227 384 aaKnown RBP12.43□□□□□ -0.42
MSB4YOL112W PRP40P33203 583 aaKnown RBP12.42□□□□□ -0.42
MSB4YOL112W HSP104P31539 908 aaKnown RBP12.4□□□□□ -0.42
MSB4YOL112W AKL1P38080 1108 aaKnown RBP12.4□□□□□ -0.42
MSB4YOL112W OSM1P21375 501 aaKnown RBP12.38□□□□□ -0.43
MSB4YOL112W YBL086CP38177 466 aa12.38□□□□□ -0.43
MSB4YOL112W ATG13Q06628 738 aa12.38□□□□□ -0.43
MSB4YOL112W NUP145P49687 1317 aa12.38□□□□□ -0.43
MSB4YOL112W CTH1P47976 325 aa12.35□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms