RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W BUD4P47136 1447 aa4.26□□□□□ -1.73
MSH2YOL090W MPH3P0CE00 602 aa4.26□□□□□ -1.73
MSH2YOL090W YJR008WP47085 338 aa4.25□□□□□ -1.73
MSH2YOL090W NIS1P53939 407 aa4.25□□□□□ -1.73
MSH2YOL090W RRP15Q06511 250 aaPredicted RBP4.25□□□□□ -1.73
MSH2YOL090W YPR204WQ08995 1032 aa4.25□□□□□ -1.73
MSH2YOL090W RTG2P32608 588 aaKnown RBP4.24□□□□□ -1.73
MSH2YOL090W DCW1P36091 449 aa4.24□□□□□ -1.73
MSH2YOL090W AI4P03878 556 aa4.24□□□□□ -1.73
MSH2YOL090W SET4P42948 560 aa4.24□□□□□ -1.73
MSH2YOL090W SCJ1P25303 377 aa4.24□□□□□ -1.73
MSH2YOL090W CST6P40535 587 aa4.23□□□□□ -1.73
MSH2YOL090W DAN4P47179 1161 aa4.23□□□□□ -1.73
MSH2YOL090W ATE1P16639 503 aa4.23□□□□□ -1.73
MSH2YOL090W RAD54P32863 898 aa4.23□□□□□ -1.73
MSH2YOL090W RTS3P53289 263 aa4.23□□□□□ -1.73
MSH2YOL090W ITT1Q04638 464 aa4.23□□□□□ -1.73
MSH2YOL090W YDR344CQ05510 147 aa4.23□□□□□ -1.73
MSH2YOL090W CDC73Q06697 393 aa4.23□□□□□ -1.73
MSH2YOL090W YAF9P53930 226 aa4.22□□□□□ -1.73
MSH2YOL090W RPL34BP40525 121 aaKnown RBP4.22□□□□□ -1.73
MSH2YOL090W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
MSH2YOL090W TPO2P53283 614 aa4.21□□□□□ -1.73
MSH2YOL090W RSC30P38781 883 aa4.21□□□□□ -1.74
MSH2YOL090W YNL108CP53929 270 aa4.21□□□□□ -1.74
MSH2YOL090W YEL023CP39992 682 aa4.2□□□□□ -1.74
MSH2YOL090W FPR4Q06205 392 aaPredicted RBP4.2□□□□□ -1.74
MSH2YOL090W YJU3P28321 313 aa4.2□□□□□ -1.74
MSH2YOL090W FPK1P53739 893 aa4.2□□□□□ -1.74
MSH2YOL090W HIR3P47171 1648 aa4.19□□□□□ -1.74
MSH2YOL090W SUP45P12385 437 aaKnown RBP4.19□□□□□ -1.74
MSH2YOL090W YBL036CP38197 257 aa4.19□□□□□ -1.74
MSH2YOL090W MAG2Q06436 670 aaKnown RBP4.19□□□□□ -1.74
MSH2YOL090W SIT4P20604 311 aa4.19□□□□□ -1.74
MSH2YOL090W NMD2P38798 1089 aaKnown RBP4.19□□□□□ -1.74
MSH2YOL090W MID1P41821 548 aa4.19□□□□□ -1.74
MSH2YOL090W MYO2P19524 1574 aaKnown RBP4.19□□□□□ -1.74
MSH2YOL090W UBX5Q06682 500 aa4.18□□□□□ -1.74
MSH2YOL090W IOC2Q12072 812 aa4.18□□□□□ -1.74
MSH2YOL090W ENO1P00924 437 aaKnown RBP4.18□□□□□ -1.74
MSH2YOL090W TRP5P00931 707 aaKnown RBP4.18□□□□□ -1.74
MSH2YOL090W RNH70P53331 553 aa4.18□□□□□ -1.74
MSH2YOL090W MRX10Q05648 414 aa4.18□□□□□ -1.74
MSH2YOL090W YBL029C-AQ3E756 94 aa4.18□□□□□ -1.74
MSH2YOL090W YBL113CQ7M4S9 792 aa4.18□□□□□ -1.74
MSH2YOL090W ASF1P32447 279 aa4.17□□□□□ -1.74
MSH2YOL090W STM1P39015 273 aaKnown RBP4.17□□□□□ -1.74
MSH2YOL090W WHI5Q12416 295 aa4.17□□□□□ -1.74
MSH2YOL090W STB3Q12427 513 aa4.17□□□□□ -1.74
MSH2YOL090W ERP5P38819 212 aa4.17□□□□□ -1.74
MSH2YOL090W NNF1P47149 201 aa4.17□□□□□ -1.74
MSH2YOL090W TEA1P47988 759 aa4.17□□□□□ -1.74
MSH2YOL090W MSC6Q08818 692 aaKnown RBP4.17□□□□□ -1.74
MSH2YOL090W BPT1P14772 1559 aa4.16□□□□□ -1.74
MSH2YOL090W ESS1P22696 170 aa4.16□□□□□ -1.74
MSH2YOL090W HST2P53686 357 aa4.16□□□□□ -1.74
MSH2YOL090W ERF2Q06551 359 aa4.16□□□□□ -1.74
MSH2YOL090W HTA1P04911 132 aaKnown RBP4.16□□□□□ -1.74
MSH2YOL090W HTA2P04912 132 aa4.16□□□□□ -1.74
MSH2YOL090W TRL1P09880 827 aaKnown RBP4.16□□□□□ -1.74
MSH2YOL090W TGL4P36165 910 aa4.16□□□□□ -1.74
MSH2YOL090W VNX1P42839 908 aa4.16□□□□□ -1.74
MSH2YOL090W BUD21Q08492 214 aaPredicted RBP4.16□□□□□ -1.74
MSH2YOL090W ENO2P00925 437 aaKnown RBP4.16□□□□□ -1.74
MSH2YOL090W YDJ1P25491 409 aaKnown RBP4.16□□□□□ -1.74
MSH2YOL090W TPS3P38426 1054 aaKnown RBP4.15□□□□□ -1.74
MSH2YOL090W OSW7P43611 510 aa4.15□□□□□ -1.74
MSH2YOL090W SUB1P54000 292 aaKnown RBP4.15□□□□□ -1.74
MSH2YOL090W YPR109WQ06104 294 aa4.15□□□□□ -1.74
MSH2YOL090W ATG2P53855 1592 aa4.15□□□□□ -1.75
MSH2YOL090W POL32P47110 350 aa4.15□□□□□ -1.75
MSH2YOL090W GIN4Q12263 1142 aa4.15□□□□□ -1.75
MSH2YOL090W ECM5Q03214 1411 aa4.14□□□□□ -1.75
MSH2YOL090W SEC20P28791 383 aa4.14□□□□□ -1.75
MSH2YOL090W PTC4P38089 393 aa4.14□□□□□ -1.75
MSH2YOL090W RAD59Q12223 238 aa4.14□□□□□ -1.75
MSH2YOL090W MSB4Q12317 492 aa4.14□□□□□ -1.75
MSH2YOL090W YOL098CQ12496 1037 aa4.14□□□□□ -1.75
MSH2YOL090W PDR1P12383 1068 aa4.14□□□□□ -1.75
MSH2YOL090W RDS2P19541 446 aaKnown RBP4.14□□□□□ -1.75
MSH2YOL090W TOM20P35180 183 aa4.14□□□□□ -1.75
MSH2YOL090W YHL050CP38721 697 aa4.14□□□□□ -1.75
MSH2YOL090W YHR219WP38900 624 aa4.14□□□□□ -1.75
MSH2YOL090W RIM21P48565 533 aa4.14□□□□□ -1.75
MSH2YOL090W MDG1P53885 366 aa4.14□□□□□ -1.75
MSH2YOL090W VPS72Q03388 795 aa4.14□□□□□ -1.75
MSH2YOL090W YEL077CQ3E7X8 1277 aa4.14□□□□□ -1.75
MSH2YOL090W SEC8P32855 1065 aa4.13□□□□□ -1.75
MSH2YOL090W MDJ2P42834 146 aa4.13□□□□□ -1.75
MSH2YOL090W WSC3Q12215 556 aa4.13□□□□□ -1.75
MSH2YOL090W IOC3P43596 787 aa4.13□□□□□ -1.75
MSH2YOL090W MPC54Q08550 464 aa4.13□□□□□ -1.75
MSH2YOL090W YCF1P39109 1515 aaKnown RBP4.13□□□□□ -1.75
MSH2YOL090W CSE4P36012 229 aa4.12□□□□□ -1.75
MSH2YOL090W KIC1P38692 1080 aa4.12□□□□□ -1.75
MSH2YOL090W SVF1Q05515 481 aa4.12□□□□□ -1.75
MSH2YOL090W SIN3P22579 1536 aa4.12□□□□□ -1.75
MSH2YOL090W PEP12P32854 288 aa4.12□□□□□ -1.75
MSH2YOL090W OYE2Q03558 400 aaKnown RBP4.12□□□□□ -1.75
MSH2YOL090W AGE1Q04412 482 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms