RNA–Protein interactions for RNA: YOL052C

SPE2, Transcript of S-adenosylmethionine decarboxylase, yeastyeast

Gene SPE2, Length 1,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE2YOL052C TY4B-HP0C2J7 1802 aa11.61□□□□□ -0.55
SPE2YOL052C TY4B-JP47024 1803 aa11.61□□□□□ -0.55
SPE2YOL052C ADE6P38972 1358 aaKnown RBP11.61□□□□□ -0.55
SPE2YOL052C SCT1P32784 759 aa11.59□□□□□ -0.55
SPE2YOL052C YML133CQ03099 1374 aa11.54□□□□□ -0.56
SPE2YOL052C YLL067CQ07888 1374 aa11.54□□□□□ -0.56
SPE2YOL052C YLL066CQ99208 1374 aa11.54□□□□□ -0.56
SPE2YOL052C CHZ1P40019 153 aaPredicted RBP11.53□□□□□ -0.56
SPE2YOL052C YRF1-2P40105 1681 aa11.52□□□□□ -0.56
SPE2YOL052C PRP43P53131 767 aaKnown RBP11.52□□□□□ -0.57
SPE2YOL052C REB1P21538 810 aa11.5□□□□□ -0.57
SPE2YOL052C MLP1Q02455 1875 aaKnown RBP11.5□□□□□ -0.57
SPE2YOL052C POL5P39985 1022 aaKnown RBP11.49□□□□□ -0.57
SPE2YOL052C APP1P53933 587 aa11.49□□□□□ -0.57
SPE2YOL052C ORC1P54784 914 aaPredicted RBP11.49□□□□□ -0.57
SPE2YOL052C MHP1P43638 1398 aa11.49□□□□□ -0.57
SPE2YOL052C MTR4P47047 1073 aaKnown RBP11.48□□□□□ -0.57
SPE2YOL052C LEU2P04173 364 aaPredicted RBP11.47□□□□□ -0.57
SPE2YOL052C FKH1P40466 484 aa11.47□□□□□ -0.57
SPE2YOL052C ENT1Q12518 454 aa11.45□□□□□ -0.58
SPE2YOL052C PRP45P28004 379 aaPredicted RBP11.43□□□□□ -0.58
SPE2YOL052C YIL177CP40434 1758 aa11.42□□□□□ -0.58
SPE2YOL052C YJL225CP40889 1758 aa11.42□□□□□ -0.58
SPE2YOL052C PRP5P21372 849 aaPredicted RBP11.42□□□□□ -0.58
SPE2YOL052C YIL055CP40523 627 aaKnown RBP11.41□□□□□ -0.58
SPE2YOL052C ENV9Q08651 330 aa11.41□□□□□ -0.58
SPE2YOL052C RPS24AP0CX31 135 aaKnown RBP11.36□□□□□ -0.59
SPE2YOL052C RPS24BP0CX32 135 aaKnown RBP11.36□□□□□ -0.59
SPE2YOL052C RTG3P38165 486 aa11.36□□□□□ -0.59
SPE2YOL052C MSB3P48566 633 aaPredicted RBP11.36□□□□□ -0.59
SPE2YOL052C CSE4P36012 229 aa11.35□□□□□ -0.59
SPE2YOL052C PDS5Q04264 1277 aa11.35□□□□□ -0.59
SPE2YOL052C IMH1Q06704 911 aaKnown RBP11.35□□□□□ -0.59
SPE2YOL052C URB1P34241 1764 aaKnown RBP11.35□□□□□ -0.59
SPE2YOL052C TAP42Q04372 366 aa11.34□□□□□ -0.59
SPE2YOL052C SLM3Q12093 417 aa11.34□□□□□ -0.59
SPE2YOL052C RSF2P46974 1380 aa11.33□□□□□ -0.6
SPE2YOL052C APC1P53886 1748 aa11.33□□□□□ -0.6
SPE2YOL052C GLN1P32288 370 aaKnown RBP11.33□□□□□ -0.6
SPE2YOL052C YRF1-3P0CX14 1859 aa11.32□□□□□ -0.6
SPE2YOL052C YRF1-7P0CX15 1859 aa11.32□□□□□ -0.6
SPE2YOL052C YRF1-6P53819 1859 aa11.32□□□□□ -0.6
SPE2YOL052C FKS3Q04952 1785 aa11.32□□□□□ -0.6
SPE2YOL052C AUS1Q08409 1394 aa11.31□□□□□ -0.6
SPE2YOL052C PDI1P17967 522 aaKnown RBP11.31□□□□□ -0.6
SPE2YOL052C TCB1Q12466 1186 aa11.3□□□□□ -0.6
SPE2YOL052C GRX4P32642 244 aa11.28□□□□□ -0.6
SPE2YOL052C YMR074CQ04773 145 aa11.28□□□□□ -0.6
SPE2YOL052C RTF1P53064 558 aa11.27□□□□□ -0.61
SPE2YOL052C FAP1P53971 965 aa11.26□□□□□ -0.61
SPE2YOL052C IES2P40154 320 aa11.25□□□□□ -0.61
SPE2YOL052C SEC3P33332 1336 aaKnown RBP11.25□□□□□ -0.61
SPE2YOL052C ROM2P51862 1356 aaKnown RBP11.25□□□□□ -0.61
SPE2YOL052C YEF3P16521 1044 aaKnown RBP11.23□□□□□ -0.61
SPE2YOL052C SNF2P22082 1703 aa11.21□□□□□ -0.61
SPE2YOL052C SIR4P11978 1358 aa11.21□□□□□ -0.61
SPE2YOL052C DPS1P04802 557 aaKnown RBP11.21□□□□□ -0.61
SPE2YOL052C EDE1P34216 1381 aa11.2□□□□□ -0.62
SPE2YOL052C XKS1P42826 600 aa11.2□□□□□ -0.62
SPE2YOL052C GAS4Q08271 471 aa11.2□□□□□ -0.62
SPE2YOL052C DOT5P40553 215 aa11.19□□□□□ -0.62
SPE2YOL052C NST1P53935 1240 aa11.19□□□□□ -0.62
SPE2YOL052C HIM1Q06674 414 aa11.19□□□□□ -0.62
SPE2YOL052C RPO41P13433 1351 aaKnown RBP11.18□□□□□ -0.62
SPE2YOL052C IOC4Q04213 475 aa11.17□□□□□ -0.62
SPE2YOL052C FOX2Q02207 900 aaKnown RBP11.16□□□□□ -0.62
SPE2YOL052C TRK1P12685 1235 aa11.14□□□□□ -0.63
SPE2YOL052C KAR2P16474 682 aaKnown RBP11.14□□□□□ -0.63
SPE2YOL052C PSD2P53037 1138 aaKnown RBP11.14□□□□□ -0.63
SPE2YOL052C RCR1P38212 213 aa11.13□□□□□ -0.63
SPE2YOL052C BUD31P25337 157 aaPredicted RBP11.12□□□□□ -0.63
SPE2YOL052C YKL133CP36066 463 aa11.12□□□□□ -0.63
SPE2YOL052C ENP1P38333 483 aaKnown RBP11.12□□□□□ -0.63
SPE2YOL052C LEU3P08638 886 aa11.11□□□□□ -0.63
SPE2YOL052C YRF1-4O13559 1382 aa11.1□□□□□ -0.63
SPE2YOL052C SPT7P35177 1332 aa11.09□□□□□ -0.63
SPE2YOL052C YKR075CP36155 307 aa11.08□□□□□ -0.64
SPE2YOL052C RPN11P43588 306 aaKnown RBP11.08□□□□□ -0.64
SPE2YOL052C MEC3Q02574 474 aa11.08□□□□□ -0.64
SPE2YOL052C COBP00163 385 aa11.06□□□□□ -0.64
SPE2YOL052C ADE16P54113 591 aaKnown RBP11.06□□□□□ -0.64
SPE2YOL052C CTF4Q01454 927 aa11.06□□□□□ -0.64
SPE2YOL052C PRI1P10363 409 aa11.05□□□□□ -0.64
SPE2YOL052C NPR2P39923 615 aa11.05□□□□□ -0.64
SPE2YOL052C DSD1P53095 428 aa11.05□□□□□ -0.64
SPE2YOL052C RRP46P53256 223 aaPredicted RBP11.05□□□□□ -0.64
SPE2YOL052C RIM15P43565 1770 aa11.04□□□□□ -0.64
SPE2YOL052C UBP1P25037 809 aa11.04□□□□□ -0.64
SPE2YOL052C INP54Q08227 384 aaKnown RBP11.04□□□□□ -0.64
SPE2YOL052C AKL1P38080 1108 aaKnown RBP11.03□□□□□ -0.64
SPE2YOL052C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.02□□□□□ -0.65not detected
SPE2YOL052C FRK1Q03002 865 aaPredicted RBP11.02□□□□□ -0.65
SPE2YOL052C LAM6Q08001 693 aa11.02□□□□□ -0.65
SPE2YOL052C GTT3P39996 337 aa11□□□□□ -0.65
SPE2YOL052C PAP2P53632 584 aaKnown RBP11□□□□□ -0.65
SPE2YOL052C NUP145P49687 1317 aa11□□□□□ -0.65
SPE2YOL052C OSM1P21375 501 aaKnown RBP10.99□□□□□ -0.65
SPE2YOL052C PRP40P33203 583 aaKnown RBP10.99□□□□□ -0.65
SPE2YOL052C HSP104P31539 908 aaKnown RBP10.98□□□□□ -0.65
SPE2YOL052C YJL181WP46987 611 aa10.97□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms