RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	DPL1	Q05567	589 aa		5.14	□□□□□ -1.59
PEX6	YNL329C	ENO1	P00924	437 aa	Known RBP	5.13	□□□□□ -1.59
PEX6	YNL329C	ENO2	P00925	437 aa	Known RBP	5.13	□□□□□ -1.59
PEX6	YNL329C	GAP1	P19145	602 aa	Predicted RBP	5.13	□□□□□ -1.59
PEX6	YNL329C	SPP1	Q03012	353 aa		5.13	□□□□□ -1.59
PEX6	YNL329C	JIP4	Q03361	876 aa		5.13	□□□□□ -1.59
PEX6	YNL329C	NPL4	P33755	580 aa		5.13	□□□□□ -1.59
PEX6	YNL329C	MPC54	Q08550	464 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	KEX2	P13134	814 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	SIT4	P20604	311 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	SLD2	P34252	453 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	YNL115C	P53925	644 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	YML083C	Q04526	418 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	LAM6	Q08001	693 aa		5.12	□□□□□ -1.59
PEX6	YNL329C	NOB1	Q08444	459 aa	Known RBP	5.11	□□□□□ -1.59
PEX6	YNL329C	TRM1	P15565	570 aa	Known RBP	5.11	□□□□□ -1.59
PEX6	YNL329C	TFG1	P41895	735 aa	Predicted RBP	5.11	□□□□□ -1.59
PEX6	YNL329C	CDC3	P32457	520 aa	Known RBP	5.1	□□□□□ -1.59
PEX6	YNL329C	TIF11	P38912	153 aa	Known RBP	5.1	□□□□□ -1.59
PEX6	YNL329C	SUP45	P12385	437 aa	Known RBP	5.1	□□□□□ -1.59
PEX6	YNL329C	VNX1	P42839	908 aa		5.1	□□□□□ -1.59
PEX6	YNL329C	NMA111	P53920	997 aa		5.1	□□□□□ -1.59
PEX6	YNL329C	ENV9	Q08651	330 aa		5.1	□□□□□ -1.59
PEX6	YNL329C	ISU2	Q12056	156 aa		5.1	□□□□□ -1.59
PEX6	YNL329C	NUD1	P32336	851 aa		5.09	□□□□□ -1.59
PEX6	YNL329C	HAT1	Q12341	374 aa		5.09	□□□□□ -1.6
PEX6	YNL329C	MAK16	P10962	306 aa	Predicted RBP	5.08	□□□□□ -1.6
PEX6	YNL329C	SPT5	P27692	1063 aa	Known RBP	5.08	□□□□□ -1.6
PEX6	YNL329C	ISF1	P32488	338 aa		5.08	□□□□□ -1.6
PEX6	YNL329C	PUS6	P53294	404 aa		5.08	□□□□□ -1.6
PEX6	YNL329C	ECM23	Q02710	187 aa		5.08	□□□□□ -1.6
PEX6	YNL329C	ERF2	Q06551	359 aa		5.08	□□□□□ -1.6
PEX6	YNL329C	GCD11	P32481	527 aa	Known RBP	5.08	□□□□□ -1.6
PEX6	YNL329C	YNL035C	P53962	389 aa	Known RBP	5.08	□□□□□ -1.6
PEX6	YNL329C	PUP1	P25043	261 aa		5.07	□□□□□ -1.6
PEX6	YNL329C	TGL4	P36165	910 aa		5.06	□□□□□ -1.6
PEX6	YNL329C	NOP8	Q08287	484 aa	Predicted RBP	5.06	□□□□□ -1.6
PEX6	YNL329C	RTG1	P32607	177 aa		5.06	□□□□□ -1.6
PEX6	YNL329C	SIS2	P36024	562 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	YPP1	P46951	817 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	PDR1	P12383	1068 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	RSC30	P38781	883 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	YDL206W	Q12424	762 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	LDB19	Q12502	818 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	UBP9	P39967	754 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	RIM21	P48565	533 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	RTF1	P53064	558 aa		5.05	□□□□□ -1.6
PEX6	YNL329C	UBX7	P38349	436 aa		5.04	□□□□□ -1.6
PEX6	YNL329C	MRX10	Q05648	414 aa		5.03	□□□□□ -1.6
PEX6	YNL329C	MCM16	Q12262	181 aa		5.03	□□□□□ -1.6
PEX6	YNL329C	EMP47	P43555	445 aa		5.03	□□□□□ -1.6
PEX6	YNL329C	MRX12	P47084	519 aa		5.03	□□□□□ -1.6
PEX6	YNL329C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
PEX6	YNL329C	NOP7	P53261	605 aa	Known RBP	5.02	□□□□□ -1.61
PEX6	YNL329C	ISM1	P48526	1002 aa		5.02	□□□□□ -1.61
PEX6	YNL329C	IOC2	Q12072	812 aa		5.01	□□□□□ -1.61
PEX6	YNL329C	NCR1	Q12200	1170 aa		5	□□□□□ -1.61
PEX6	YNL329C	SAP30	P38429	201 aa		5	□□□□□ -1.61
PEX6	YNL329C	TUB4	P53378	473 aa		5	□□□□□ -1.61
PEX6	YNL329C	NAF1	P53919	492 aa	Known RBP	5	□□□□□ -1.61
PEX6	YNL329C	YDL129W	Q07555	291 aa		5	□□□□□ -1.61
PEX6	YNL329C	RAM1	P22007	431 aa		4.99	□□□□□ -1.61
PEX6	YNL329C	SSF1	P38789	453 aa	Predicted RBP	4.99	□□□□□ -1.61
PEX6	YNL329C	SEC61	P32915	480 aa		4.99	□□□□□ -1.61
PEX6	YNL329C	HAP5	Q02516	242 aa		4.99	□□□□□ -1.61
PEX6	YNL329C	ELP4	Q02884	456 aa	Known RBP	4.99	□□□□□ -1.61
PEX6	YNL329C	TEC1	P18412	486 aa		4.98	□□□□□ -1.61
PEX6	YNL329C	STR2	P47164	639 aa		4.98	□□□□□ -1.61
PEX6	YNL329C	STE20	Q03497	939 aa	Known RBP	4.98	□□□□□ -1.61
PEX6	YNL329C	ALR1	Q08269	859 aa		4.98	□□□□□ -1.61
PEX6	YNL329C	GAL2	P13181	574 aa		4.97	□□□□□ -1.61
PEX6	YNL329C	GUT2	P32191	649 aa		4.97	□□□□□ -1.61
PEX6	YNL329C	KAR5	Q04746	504 aa		4.97	□□□□□ -1.61
PEX6	YNL329C	YBL113C	Q7M4S9	792 aa		4.96	□□□□□ -1.61
PEX6	YNL329C	RDS2	P19541	446 aa	Known RBP	4.96	□□□□□ -1.62
PEX6	YNL329C	PAT1	P25644	796 aa	Known RBP	4.96	□□□□□ -1.62
PEX6	YNL329C	RRN7	P40992	514 aa		4.96	□□□□□ -1.62
PEX6	YNL329C	KXD1	P53158	218 aa		4.96	□□□□□ -1.62
PEX6	YNL329C	SNU71	P53207	620 aa	Known RBP	4.96	□□□□□ -1.62
PEX6	YNL329C	SOH1	P38633	127 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	THI12	P42883	340 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	THI5	P43534	340 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	THI11	P47183	340 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	THI13	Q07748	340 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	PEP12	P32854	288 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	ATG3	P40344	310 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	RPA14	P50106	137 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	YEL077C	Q3E7X8	1277 aa		4.95	□□□□□ -1.62
PEX6	YNL329C	HEM3	P28789	327 aa		4.94	□□□□□ -1.62
PEX6	YNL329C	MET10	P39692	1035 aa		4.94	□□□□□ -1.62
PEX6	YNL329C	FIG4	P42837	879 aa		4.94	□□□□□ -1.62
PEX6	YNL329C	AIM44	Q99299	758 aa		4.94	□□□□□ -1.62
PEX6	YNL329C	RRN6	P32786	894 aa		4.93	□□□□□ -1.62
PEX6	YNL329C	GRS1	P38088	690 aa	Known RBP	4.93	□□□□□ -1.62
PEX6	YNL329C	PAC1	P39946	494 aa	Known RBP	4.93	□□□□□ -1.62
PEX6	YNL329C	IPL1	P38991	367 aa		4.93	□□□□□ -1.62
PEX6	YNL329C	PDI1	P17967	522 aa	Known RBP	4.93	□□□□□ -1.62
PEX6	YNL329C	STM1	P39015	273 aa	Known RBP	4.93	□□□□□ -1.62
PEX6	YNL329C	PTC2	P39966	464 aa	Known RBP	4.92	□□□□□ -1.62
PEX6	YNL329C	ITT1	Q04638	464 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms