RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W PDS5Q04264 1277 aa10.94□□□□□ -0.66
YPT11YNL304W MLP1Q02455 1875 aaKnown RBP10.92□□□□□ -0.66
YPT11YNL304W CPS1P27614 576 aa10.92□□□□□ -0.66
YPT11YNL304W PSK1P31374 1356 aa10.91□□□□□ -0.66
YPT11YNL304W PPH3P32345 308 aa10.89□□□□□ -0.67
YPT11YNL304W LEU2P04173 364 aaPredicted RBP10.86□□□□□ -0.67
YPT11YNL304W FKH1P40466 484 aa10.85□□□□□ -0.67
YPT11YNL304W MTR4P47047 1073 aaKnown RBP10.85□□□□□ -0.67
YPT11YNL304W RTG3P38165 486 aa10.84□□□□□ -0.67
YPT11YNL304W SPT7P35177 1332 aa10.83□□□□□ -0.68
YPT11YNL304W PSD2P53037 1138 aaKnown RBP10.8□□□□□ -0.68
YPT11YNL304W RTF1P53064 558 aa10.8□□□□□ -0.68
YPT11YNL304W LEU3P08638 886 aa10.79□□□□□ -0.68
YPT11YNL304W PDI1P17967 522 aaKnown RBP10.79□□□□□ -0.68
YPT11YNL304W CSE4P36012 229 aa10.79□□□□□ -0.68
YPT11YNL304W ADE6P38972 1358 aaKnown RBP10.77□□□□□ -0.68
YPT11YNL304W PTP3P40048 928 aa10.77□□□□□ -0.69
YPT11YNL304W YML133CQ03099 1374 aa10.76□□□□□ -0.69
YPT11YNL304W YLL067CQ07888 1374 aa10.76□□□□□ -0.69
YPT11YNL304W YLL066CQ99208 1374 aa10.76□□□□□ -0.69
YPT11YNL304W TY4B-HP0C2J7 1802 aa10.74□□□□□ -0.69
YPT11YNL304W TY4B-JP47024 1803 aa10.74□□□□□ -0.69
YPT11YNL304W RPS24AP0CX31 135 aaKnown RBP10.74□□□□□ -0.69
YPT11YNL304W RPS24BP0CX32 135 aaKnown RBP10.74□□□□□ -0.69
YPT11YNL304W ENP1P38333 483 aaKnown RBP10.74□□□□□ -0.69
YPT11YNL304W KAR2P16474 682 aaKnown RBP10.73□□□□□ -0.69
YPT11YNL304W PRP45P28004 379 aaPredicted RBP10.73□□□□□ -0.69
YPT11YNL304W PRP43P53131 767 aaKnown RBP10.73□□□□□ -0.69
YPT11YNL304W GRX4P32642 244 aa10.72□□□□□ -0.69
YPT11YNL304W TAP42Q04372 366 aa10.72□□□□□ -0.69
YPT11YNL304W PRP5P21372 849 aaPredicted RBP10.71□□□□□ -0.69
YPT11YNL304W RRP5Q05022 1729 aaKnown RBP10.7□□□□□ -0.7
YPT11YNL304W DPS1P04802 557 aaKnown RBP10.68□□□□□ -0.7
YPT11YNL304W YAH1Q12184 172 aaKnown RBP10.68□□□□□ -0.7
YPT11YNL304W NST1P53935 1240 aa10.67□□□□□ -0.7
YPT11YNL304W GAS4Q08271 471 aa10.67□□□□□ -0.7
YPT11YNL304W PAP2P53632 584 aaKnown RBP10.66□□□□□ -0.7
YPT11YNL304W ENT1Q12518 454 aa10.65□□□□□ -0.7
YPT11YNL304W REB1P21538 810 aa10.64□□□□□ -0.71
YPT11YNL304W HIM1Q06674 414 aa10.63□□□□□ -0.71
YPT11YNL304W TCB1Q12466 1186 aa10.63□□□□□ -0.71
YPT11YNL304W TRK1P12685 1235 aa10.62□□□□□ -0.71
YPT11YNL304W YEF3P16521 1044 aaKnown RBP10.62□□□□□ -0.71
YPT11YNL304W MSB3P48566 633 aaPredicted RBP10.62□□□□□ -0.71
YPT11YNL304W APP1P53933 587 aa10.62□□□□□ -0.71
YPT11YNL304W SLM3Q12093 417 aa10.62□□□□□ -0.71
YPT11YNL304W YRF1-2P40105 1681 aa10.6□□□□□ -0.71
YPT11YNL304W AUS1Q08409 1394 aa10.6□□□□□ -0.71
YPT11YNL304W IOC4Q04213 475 aa10.59□□□□□ -0.71
YPT11YNL304W ENV9Q08651 330 aa10.59□□□□□ -0.71
YPT11YNL304W FKS3Q04952 1785 aa10.58□□□□□ -0.72
YPT11YNL304W RPO41P13433 1351 aaKnown RBP10.58□□□□□ -0.72
YPT11YNL304W SNF2P22082 1703 aa10.57□□□□□ -0.72
YPT11YNL304W IMH1Q06704 911 aaKnown RBP10.56□□□□□ -0.72
YPT11YNL304W RTR1P40084 226 aaPredicted RBP10.55□□□□□ -0.72
YPT11YNL304W XKS1P42826 600 aa10.55□□□□□ -0.72
YPT11YNL304W RSF2P46974 1380 aa10.54□□□□□ -0.72
YPT11YNL304W URB1P34241 1764 aaKnown RBP10.54□□□□□ -0.72
YPT11YNL304W YIL177CP40434 1758 aa10.53□□□□□ -0.72
YPT11YNL304W YJL225CP40889 1758 aa10.53□□□□□ -0.72
YPT11YNL304W RPP0P05317 312 aaKnown RBP10.53□□□□□ -0.72
YPT11YNL304W NSR1P27476 414 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
YPT11YNL304W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
YPT11YNL304W IES2P40154 320 aa10.52□□□□□ -0.73
YPT11YNL304W YDL144CQ07589 356 aa10.51□□□□□ -0.73
YPT11YNL304W YIL055CP40523 627 aaKnown RBP10.5□□□□□ -0.73
YPT11YNL304W APC1P53886 1748 aa10.5□□□□□ -0.73
YPT11YNL304W AKL1P38080 1108 aaKnown RBP10.49□□□□□ -0.73
YPT11YNL304W MEC3Q02574 474 aa10.49□□□□□ -0.73
YPT11YNL304W VPS27P40343 622 aaKnown RBP10.48□□□□□ -0.73
YPT11YNL304W DSD1P53095 428 aa10.48□□□□□ -0.73
YPT11YNL304W RRP46P53256 223 aaPredicted RBP10.47□□□□□ -0.73
YPT11YNL304W CTF4Q01454 927 aa10.47□□□□□ -0.73
YPT11YNL304W CDC45Q08032 650 aa10.47□□□□□ -0.73
YPT11YNL304W SIR4P11978 1358 aa10.47□□□□□ -0.73
YPT11YNL304W PRD1P25375 712 aa10.46□□□□□ -0.73
YPT11YNL304W HSP104P31539 908 aaKnown RBP10.46□□□□□ -0.73
YPT11YNL304W RCR1P38212 213 aa10.46□□□□□ -0.73
YPT11YNL304W MPP10P47083 593 aaKnown RBP10.46□□□□□ -0.73
YPT11YNL304W ROM2P51862 1356 aaKnown RBP10.46□□□□□ -0.74
YPT11YNL304W YKL133CP36066 463 aa10.45□□□□□ -0.74
YPT11YNL304W AOS1Q06624 347 aa10.45□□□□□ -0.74
YPT11YNL304W PRS1P32895 427 aaKnown RBP10.43□□□□□ -0.74
YPT11YNL304W YRF1-4O13559 1382 aa10.42□□□□□ -0.74
YPT11YNL304W YRF1-3P0CX14 1859 aa10.41□□□□□ -0.74
YPT11YNL304W YRF1-7P0CX15 1859 aa10.41□□□□□ -0.74
YPT11YNL304W YRF1-6P53819 1859 aa10.41□□□□□ -0.74
YPT11YNL304W ATG13Q06628 738 aa10.4□□□□□ -0.74
YPT11YNL304W TPD3P31383 635 aa10.39□□□□□ -0.75
YPT11YNL304W YRB30P53107 440 aaPredicted RBP10.39□□□□□ -0.75
YPT11YNL304W YNL050CP53952 270 aa10.39□□□□□ -0.75
YPT11YNL304W THI22Q06490 572 aa10.39□□□□□ -0.75
YPT11YNL304W LAM6Q08001 693 aa10.39□□□□□ -0.75
YPT11YNL304W NTH2P35172 780 aa10.38□□□□□ -0.75
YPT11YNL304W SAP155P43612 1002 aa10.38□□□□□ -0.75
YPT11YNL304W YJL181WP46987 611 aa10.38□□□□□ -0.75
YPT11YNL304W ZDS1P50111 915 aaKnown RBP10.38□□□□□ -0.75
YPT11YNL304W KCC4P25389 1037 aa10.37□□□□□ -0.75
YPT11YNL304W MAM1P40065 302 aa10.37□□□□□ -0.75
YPT11YNL304W DOT5P40553 215 aa10.37□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms