RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeastyeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT4YNL101W PAP2P53632 584 aaKnown RBP7.54□□□□□ -1.2
AVT4YNL101W RKM3P38222 552 aa7.54□□□□□ -1.2
AVT4YNL101W TCD1P38756 429 aa7.54□□□□□ -1.2
AVT4YNL101W NNF2P53253 936 aa7.54□□□□□ -1.2
AVT4YNL101W PLP2Q12017 286 aa7.52□□□□□ -1.21
AVT4YNL101W YBT1P32386 1661 aa7.52□□□□□ -1.21
AVT4YNL101W SAP190P36123 1033 aa7.51□□□□□ -1.21
AVT4YNL101W RLP24Q07915 199 aaKnown RBP7.51□□□□□ -1.21
AVT4YNL101W YGL140CP53120 1219 aa7.5□□□□□ -1.21
AVT4YNL101W HAP5Q02516 242 aa7.5□□□□□ -1.21
AVT4YNL101W RNT1Q02555 471 aa7.5□□□□□ -1.21
AVT4YNL101W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
AVT4YNL101W SFI1Q12369 946 aa7.5□□□□□ -1.21
AVT4YNL101W ATG2P53855 1592 aa7.5□□□□□ -1.21
AVT4YNL101W TY1B-DR3Q99231 1755 aa7.49□□□□□ -1.21
AVT4YNL101W TY3B-IQ7LHG5 1498 aaKnown RBP7.49□□□□□ -1.21
AVT4YNL101W DNF2Q12675 1612 aa7.49□□□□□ -1.21
AVT4YNL101W PSE1P32337 1089 aaKnown RBP7.49□□□□□ -1.21
AVT4YNL101W MPP10P47083 593 aaKnown RBP7.49□□□□□ -1.21
AVT4YNL101W YGL081WP53156 320 aa7.49□□□□□ -1.21
AVT4YNL101W UBP10P53874 792 aaPredicted RBP7.49□□□□□ -1.21
AVT4YNL101W YMR102CQ03177 834 aa7.49□□□□□ -1.21
AVT4YNL101W SRS2P12954 1174 aa7.48□□□□□ -1.21
AVT4YNL101W RPO31P04051 1460 aa7.48□□□□□ -1.21
AVT4YNL101W DAL5P15365 543 aa7.48□□□□□ -1.21
AVT4YNL101W CHZ1P40019 153 aaPredicted RBP7.48□□□□□ -1.21
AVT4YNL101W POL32P47110 350 aa7.48□□□□□ -1.21
AVT4YNL101W COG8Q04632 607 aa7.48□□□□□ -1.21
AVT4YNL101W SRP54P20424 541 aaKnown RBP7.47□□□□□ -1.21
AVT4YNL101W MIC60P36112 540 aa7.47□□□□□ -1.21
AVT4YNL101W NOP8Q08287 484 aaPredicted RBP7.47□□□□□ -1.21
AVT4YNL101W YOL087CQ99247 1116 aa7.47□□□□□ -1.21
AVT4YNL101W ROM2P51862 1356 aaKnown RBP7.47□□□□□ -1.21
AVT4YNL101W RAD9P14737 1309 aa7.46□□□□□ -1.22
AVT4YNL101W GDT1P38301 280 aaPredicted RBP7.46□□□□□ -1.22
AVT4YNL101W TAN1P53072 289 aaPredicted RBP7.46□□□□□ -1.22
AVT4YNL101W SML1Q04964 104 aa7.46□□□□□ -1.22
AVT4YNL101W IQG1Q12280 1495 aa7.45□□□□□ -1.22
AVT4YNL101W IOC4Q04213 475 aa7.45□□□□□ -1.22
AVT4YNL101W MFT1P33441 392 aaKnown RBP7.45□□□□□ -1.22
AVT4YNL101W SWH1P35845 1188 aa7.45□□□□□ -1.22
AVT4YNL101W CIR1P42940 261 aa7.45□□□□□ -1.22
AVT4YNL101W TRK1P12685 1235 aa7.44□□□□□ -1.22
AVT4YNL101W RVS167P39743 482 aaKnown RBP7.44□□□□□ -1.22
AVT4YNL101W STU2P46675 888 aa7.44□□□□□ -1.22
AVT4YNL101W MRS2Q01926 470 aa7.44□□□□□ -1.22
AVT4YNL101W MET5P47169 1442 aa7.44□□□□□ -1.22
AVT4YNL101W CYC8P14922 966 aa7.43□□□□□ -1.22
AVT4YNL101W RAD51P25454 400 aa7.43□□□□□ -1.22
AVT4YNL101W ARO1P08566 1588 aaKnown RBP7.43□□□□□ -1.22
AVT4YNL101W RPN12P32496 274 aa7.43□□□□□ -1.22
AVT4YNL101W MNR2P35724 969 aa7.43□□□□□ -1.22
AVT4YNL101W RRT14P40470 206 aa7.43□□□□□ -1.22
AVT4YNL101W YIL092WP40497 633 aa7.43□□□□□ -1.22
AVT4YNL101W VPS72Q03388 795 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-LR1P0C2J3 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-FP0CX63 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-GR2P0CX64 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-CP25384 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-DR2Q03494 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY1B-DR1Q03855 1755 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-DR3Q07791 1770 aaKnown RBP7.43□□□□□ -1.22
AVT4YNL101W TY2B-OR1Q12113 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-DR1Q12472 1770 aa7.43□□□□□ -1.22
AVT4YNL101W TY2B-OR2Q12501 1770 aa7.43□□□□□ -1.22
AVT4YNL101W YNL035CP53962 389 aaKnown RBP7.42□□□□□ -1.22
AVT4YNL101W TAF5P38129 798 aa7.42□□□□□ -1.22
AVT4YNL101W RTT107P38850 1070 aa7.42□□□□□ -1.22
AVT4YNL101W CEP3P40969 608 aa7.42□□□□□ -1.22
AVT4YNL101W NPA3P47122 385 aa7.42□□□□□ -1.22
AVT4YNL101W ARP5P53946 755 aa7.42□□□□□ -1.22
AVT4YNL101W TIM50Q02776 476 aa7.42□□□□□ -1.22
AVT4YNL101W SWI3P32591 825 aa7.41□□□□□ -1.22
AVT4YNL101W CBF5P33322 483 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
AVT4YNL101W BDP1P46678 594 aa7.41□□□□□ -1.22
AVT4YNL101W SPT5P27692 1063 aaKnown RBP7.4□□□□□ -1.22
AVT4YNL101W VPS41P38959 992 aa7.4□□□□□ -1.22
AVT4YNL101W PUF6Q04373 656 aaKnown RBP7.4□□□□□ -1.22
AVT4YNL101W TLG2Q08144 397 aa7.4□□□□□ -1.22
AVT4YNL101W TY2B-BQ12491 1770 aa7.4□□□□□ -1.22
AVT4YNL101W PUS1Q12211 544 aaKnown RBP7.4□□□□□ -1.23
AVT4YNL101W RTG3P38165 486 aa7.39□□□□□ -1.23
AVT4YNL101W PBY1P38254 753 aa7.39□□□□□ -1.23
AVT4YNL101W SAP155P43612 1002 aa7.39□□□□□ -1.23
AVT4YNL101W YMR1P47147 688 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
AVT4YNL101W CAT8P39113 1433 aa7.39□□□□□ -1.23
AVT4YNL101W PUP2P32379 260 aa7.39□□□□□ -1.23
AVT4YNL101W PRP31P49704 494 aaPredicted RBP7.39□□□□□ -1.23
AVT4YNL101W YGL082WP53155 381 aa7.39□□□□□ -1.23
AVT4YNL101W KRE33P53914 1056 aaKnown RBP7.39□□□□□ -1.23
AVT4YNL101W SSL2Q00578 843 aa7.39□□□□□ -1.23
AVT4YNL101W NUP145P49687 1317 aa7.38□□□□□ -1.23
AVT4YNL101W MSH1P25846 959 aa7.38□□□□□ -1.23
AVT4YNL101W YSH1Q06224 779 aaPredicted RBP7.38□□□□□ -1.23
AVT4YNL101W HAP1P0CE41 1502 aa7.38□□□□□ -1.23
AVT4YNL101W YEF3P16521 1044 aaKnown RBP7.37□□□□□ -1.23
AVT4YNL101W RRP14P36080 434 aaKnown RBP7.37□□□□□ -1.23
AVT4YNL101W YKL068W-AQ3E826 78 aa7.37□□□□□ -1.23
AVT4YNL101W DID4P36108 232 aa7.37□□□□□ -1.23
AVT4YNL101W BDH2P39713 417 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms