RNA–Protein interactions for RNA: YMR138W

CIN4, Transcript of GTP-binding protein involved in beta-tubulin (Tub2p) folding, yeastyeast

Gene CIN4, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIN4YMR138W YAH1Q12184 172 aaKnown RBP8.1□□□□□ -1.11
CIN4YMR138W YML133CQ03099 1374 aa8.08□□□□□ -1.12
CIN4YMR138W YLL067CQ07888 1374 aa8.08□□□□□ -1.12
CIN4YMR138W YLL066CQ99208 1374 aa8.08□□□□□ -1.12
CIN4YMR138W POL5P39985 1022 aaKnown RBP8.06□□□□□ -1.12
CIN4YMR138W PRP43P53131 767 aaKnown RBP8.06□□□□□ -1.12
CIN4YMR138W MHP1P43638 1398 aa8.05□□□□□ -1.12
CIN4YMR138W CHZ1P40019 153 aaPredicted RBP8.04□□□□□ -1.12
CIN4YMR138W FKH1P40466 484 aa8.03□□□□□ -1.12
CIN4YMR138W MTR4P47047 1073 aaKnown RBP8.02□□□□□ -1.13
CIN4YMR138W LEU2P04173 364 aaPredicted RBP8.01□□□□□ -1.13
CIN4YMR138W RRP5Q05022 1729 aaKnown RBP8□□□□□ -1.13
CIN4YMR138W REB1P21538 810 aa7.99□□□□□ -1.13
CIN4YMR138W ORC1P54784 914 aaPredicted RBP7.99□□□□□ -1.13
CIN4YMR138W TY4B-HP0C2J7 1802 aa7.98□□□□□ -1.13
CIN4YMR138W TY4B-JP47024 1803 aa7.98□□□□□ -1.13
CIN4YMR138W APP1P53933 587 aa7.97□□□□□ -1.13
CIN4YMR138W YRF1-2P40105 1681 aa7.96□□□□□ -1.13
CIN4YMR138W PRP5P21372 849 aaPredicted RBP7.96□□□□□ -1.14
CIN4YMR138W ENT1Q12518 454 aa7.96□□□□□ -1.14
CIN4YMR138W PRP45P28004 379 aaPredicted RBP7.95□□□□□ -1.14
CIN4YMR138W PDS5Q04264 1277 aa7.95□□□□□ -1.14
CIN4YMR138W TAP42Q04372 366 aa7.94□□□□□ -1.14
CIN4YMR138W RTG3P38165 486 aa7.93□□□□□ -1.14
CIN4YMR138W YIL055CP40523 627 aaKnown RBP7.93□□□□□ -1.14
CIN4YMR138W ENV9Q08651 330 aa7.93□□□□□ -1.14
CIN4YMR138W SLM3Q12093 417 aa7.92□□□□□ -1.14
CIN4YMR138W RPS24AP0CX31 135 aaKnown RBP7.91□□□□□ -1.14
CIN4YMR138W RPS24BP0CX32 135 aaKnown RBP7.91□□□□□ -1.14
CIN4YMR138W PDI1P17967 522 aaKnown RBP7.91□□□□□ -1.14
CIN4YMR138W MSB3P48566 633 aaPredicted RBP7.91□□□□□ -1.14
CIN4YMR138W MLP1Q02455 1875 aaKnown RBP7.9□□□□□ -1.14
CIN4YMR138W RSF2P46974 1380 aa7.9□□□□□ -1.14
CIN4YMR138W AUS1Q08409 1394 aa7.9□□□□□ -1.14
CIN4YMR138W CSE4P36012 229 aa7.9□□□□□ -1.14
CIN4YMR138W GRX4P32642 244 aa7.89□□□□□ -1.15
CIN4YMR138W IMH1Q06704 911 aaKnown RBP7.89□□□□□ -1.15
CIN4YMR138W SEC3P33332 1336 aaKnown RBP7.88□□□□□ -1.15
CIN4YMR138W RTF1P53064 558 aa7.87□□□□□ -1.15
CIN4YMR138W TCB1Q12466 1186 aa7.87□□□□□ -1.15
CIN4YMR138W YEF3P16521 1044 aaKnown RBP7.86□□□□□ -1.15
CIN4YMR138W GLN1P32288 370 aaKnown RBP7.86□□□□□ -1.15
CIN4YMR138W IOC4Q04213 475 aa7.86□□□□□ -1.15
CIN4YMR138W YIL177CP40434 1758 aa7.86□□□□□ -1.15
CIN4YMR138W YJL225CP40889 1758 aa7.86□□□□□ -1.15
CIN4YMR138W YMR074CQ04773 145 aa7.84□□□□□ -1.15
CIN4YMR138W SIR4P11978 1358 aa7.84□□□□□ -1.16
CIN4YMR138W ROM2P51862 1356 aaKnown RBP7.84□□□□□ -1.16
CIN4YMR138W APC1P53886 1748 aa7.83□□□□□ -1.16
CIN4YMR138W IES2P40154 320 aa7.83□□□□□ -1.16
CIN4YMR138W NST1P53935 1240 aa7.82□□□□□ -1.16
CIN4YMR138W RPO41P13433 1351 aaKnown RBP7.82□□□□□ -1.16
CIN4YMR138W EDE1P34216 1381 aa7.82□□□□□ -1.16
CIN4YMR138W URB1P34241 1764 aaKnown RBP7.82□□□□□ -1.16
CIN4YMR138W DPS1P04802 557 aaKnown RBP7.81□□□□□ -1.16
CIN4YMR138W HIM1Q06674 414 aa7.81□□□□□ -1.16
CIN4YMR138W XKS1P42826 600 aa7.8□□□□□ -1.16
CIN4YMR138W PSD2P53037 1138 aaKnown RBP7.8□□□□□ -1.16
CIN4YMR138W GAS4Q08271 471 aa7.8□□□□□ -1.16
CIN4YMR138W FKS3Q04952 1785 aa7.79□□□□□ -1.16
CIN4YMR138W TRK1P12685 1235 aa7.79□□□□□ -1.16
CIN4YMR138W YRF1-3P0CX14 1859 aa7.79□□□□□ -1.16
CIN4YMR138W YRF1-7P0CX15 1859 aa7.79□□□□□ -1.16
CIN4YMR138W YRF1-6P53819 1859 aa7.79□□□□□ -1.16
CIN4YMR138W DOT5P40553 215 aa7.78□□□□□ -1.16
CIN4YMR138W KAR2P16474 682 aaKnown RBP7.77□□□□□ -1.17
CIN4YMR138W SPT7P35177 1332 aa7.77□□□□□ -1.17
CIN4YMR138W YRF1-4O13559 1382 aa7.76□□□□□ -1.17
CIN4YMR138W RCR1P38212 213 aa7.76□□□□□ -1.17
CIN4YMR138W FOX2Q02207 900 aaKnown RBP7.76□□□□□ -1.17
CIN4YMR138W YKL133CP36066 463 aa7.75□□□□□ -1.17
CIN4YMR138W RRP46P53256 223 aaPredicted RBP7.74□□□□□ -1.17
CIN4YMR138W FAP1P53971 965 aa7.74□□□□□ -1.17
CIN4YMR138W CTF4Q01454 927 aa7.74□□□□□ -1.17
CIN4YMR138W SNF2P22082 1703 aa7.74□□□□□ -1.17
CIN4YMR138W MEC3Q02574 474 aa7.73□□□□□ -1.17
CIN4YMR138W BUD31P25337 157 aaPredicted RBP7.72□□□□□ -1.17
CIN4YMR138W YKR075CP36155 307 aa7.72□□□□□ -1.17
CIN4YMR138W ENP1P38333 483 aaKnown RBP7.72□□□□□ -1.17
CIN4YMR138W DSD1P53095 428 aa7.72□□□□□ -1.17
CIN4YMR138W AKL1P38080 1108 aaKnown RBP7.71□□□□□ -1.18
CIN4YMR138W ADE16P54113 591 aaKnown RBP7.71□□□□□ -1.18
CIN4YMR138W INP54Q08227 384 aaKnown RBP7.71□□□□□ -1.18
CIN4YMR138W LEU3P08638 886 aa7.7□□□□□ -1.18
CIN4YMR138W RPN11P43588 306 aaKnown RBP7.7□□□□□ -1.18
CIN4YMR138W COBP00163 385 aa7.69□□□□□ -1.18
CIN4YMR138W NPR2P39923 615 aa7.69□□□□□ -1.18
CIN4YMR138W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
CIN4YMR138W UBP1P25037 809 aa7.67□□□□□ -1.18
CIN4YMR138W NTH2P35172 780 aa7.67□□□□□ -1.18
CIN4YMR138W GTT3P39996 337 aa7.67□□□□□ -1.18
CIN4YMR138W PAP2P53632 584 aaKnown RBP7.67□□□□□ -1.18
CIN4YMR138W FRK1Q03002 865 aaPredicted RBP7.67□□□□□ -1.18
CIN4YMR138W LAM6Q08001 693 aa7.67□□□□□ -1.18
CIN4YMR138W NUP145P49687 1317 aa7.67□□□□□ -1.18
CIN4YMR138W PRI1P10363 409 aa7.66□□□□□ -1.18
CIN4YMR138W OSM1P21375 501 aaKnown RBP7.66□□□□□ -1.18
CIN4YMR138W PRD1P25375 712 aa7.65□□□□□ -1.18
CIN4YMR138W HSP104P31539 908 aaKnown RBP7.65□□□□□ -1.18
CIN4YMR138W RPP0P05317 312 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms