RNA–Protein interactions for RNA: YMR008C

PLB1, Transcript of Phospholipase B (lysophospholipase) involved in lipid metabolism, yeastyeast

Gene PLB1, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PLB1YMR008C RIA1P53893 1110 aa12.97□□□□□ -0.33
PLB1YMR008C YML133CQ03099 1374 aa12.94□□□□□ -0.34
PLB1YMR008C YLL067CQ07888 1374 aa12.94□□□□□ -0.34
PLB1YMR008C YLL066CQ99208 1374 aa12.94□□□□□ -0.34
PLB1YMR008C RCM1P53972 490 aa12.92□□□□□ -0.34
PLB1YMR008C PPH3P32345 308 aa12.9□□□□□ -0.34
PLB1YMR008C PSK1P31374 1356 aa12.89□□□□□ -0.35
PLB1YMR008C YEF3P16521 1044 aaKnown RBP12.89□□□□□ -0.35
PLB1YMR008C TRK1P12685 1235 aa12.87□□□□□ -0.35
PLB1YMR008C YNR029CP53729 429 aaKnown RBP12.85□□□□□ -0.35
PLB1YMR008C CPS1P27614 576 aa12.83□□□□□ -0.36
PLB1YMR008C IOC4Q04213 475 aa12.83□□□□□ -0.36
PLB1YMR008C TY1B-NL2Q99337 1749 aaKnown RBP12.8□□□□□ -0.36
PLB1YMR008C RPP0P05317 312 aaKnown RBP12.8□□□□□ -0.36
PLB1YMR008C USO1P25386 1790 aa12.79□□□□□ -0.36
PLB1YMR008C LEU2P04173 364 aaPredicted RBP12.78□□□□□ -0.36
PLB1YMR008C VPS27P40343 622 aaKnown RBP12.78□□□□□ -0.36
PLB1YMR008C YDL144CQ07589 356 aa12.76□□□□□ -0.37
PLB1YMR008C CDC45Q08032 650 aa12.76□□□□□ -0.37
PLB1YMR008C TAP42Q04372 366 aa12.75□□□□□ -0.37
PLB1YMR008C MTR4P47047 1073 aaKnown RBP12.74□□□□□ -0.37
PLB1YMR008C PDI1P17967 522 aaKnown RBP12.74□□□□□ -0.37
PLB1YMR008C RRP46P53256 223 aaPredicted RBP12.73□□□□□ -0.37
PLB1YMR008C KAR2P16474 682 aaKnown RBP12.72□□□□□ -0.37
PLB1YMR008C SNF2P22082 1703 aa12.72□□□□□ -0.37
PLB1YMR008C HIM1Q06674 414 aa12.71□□□□□ -0.37
PLB1YMR008C RVB2Q12464 471 aaKnown RBP12.71□□□□□ -0.37
PLB1YMR008C MPP10P47083 593 aaKnown RBP12.7□□□□□ -0.38
PLB1YMR008C AUS1Q08409 1394 aa12.7□□□□□ -0.38
PLB1YMR008C FUN12P39730 1002 aaKnown RBP12.69□□□□□ -0.38
PLB1YMR008C YMR196WQ04336 1088 aa12.69□□□□□ -0.38
PLB1YMR008C RTF1P53064 558 aa12.68□□□□□ -0.38
PLB1YMR008C ADE6P38972 1358 aaKnown RBP12.68□□□□□ -0.38
PLB1YMR008C GRX4P32642 244 aa12.67□□□□□ -0.38
PLB1YMR008C SUI2P20459 304 aaKnown RBP12.67□□□□□ -0.38
PLB1YMR008C RTR1P40084 226 aaPredicted RBP12.67□□□□□ -0.38
PLB1YMR008C PRP43P53131 767 aaKnown RBP12.66□□□□□ -0.38
PLB1YMR008C RPS24AP0CX31 135 aaKnown RBP12.65□□□□□ -0.38
PLB1YMR008C RPS24BP0CX32 135 aaKnown RBP12.65□□□□□ -0.38
PLB1YMR008C CSE4P36012 229 aa12.64□□□□□ -0.39
PLB1YMR008C PAP2P53632 584 aaKnown RBP12.64□□□□□ -0.39
PLB1YMR008C THI12P42883 340 aa12.63□□□□□ -0.39
PLB1YMR008C THI5P43534 340 aa12.63□□□□□ -0.39
PLB1YMR008C THI11P47183 340 aa12.63□□□□□ -0.39
PLB1YMR008C YRB30P53107 440 aaPredicted RBP12.63□□□□□ -0.39
PLB1YMR008C THI13Q07748 340 aa12.63□□□□□ -0.39
PLB1YMR008C GAS4Q08271 471 aa12.61□□□□□ -0.39
PLB1YMR008C PRD1P25375 712 aa12.61□□□□□ -0.39
PLB1YMR008C SAP155P43612 1002 aa12.59□□□□□ -0.39
PLB1YMR008C THI22Q06490 572 aa12.59□□□□□ -0.39
PLB1YMR008C DPS1P04802 557 aaKnown RBP12.57□□□□□ -0.4
PLB1YMR008C RPO41P13433 1351 aaKnown RBP12.57□□□□□ -0.4
PLB1YMR008C TY4B-HP0C2J7 1802 aa12.56□□□□□ -0.4
PLB1YMR008C TY4B-JP47024 1803 aa12.56□□□□□ -0.4
PLB1YMR008C NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.56□□□□□ -0.4not detected
PLB1YMR008C TPD3P31383 635 aa12.54□□□□□ -0.4
PLB1YMR008C HEF3P53978 1044 aaKnown RBP12.54□□□□□ -0.4
PLB1YMR008C TFA1P36100 482 aa12.51□□□□□ -0.41
PLB1YMR008C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.51□□□□□ -0.41not detected
PLB1YMR008C RTT109Q07794 436 aa12.5□□□□□ -0.41
PLB1YMR008C AKL1P38080 1108 aaKnown RBP12.49□□□□□ -0.41
PLB1YMR008C FPR3P38911 411 aaKnown RBP12.48□□□□□ -0.41
PLB1YMR008C YIL177CP40434 1758 aa12.48□□□□□ -0.41
PLB1YMR008C YJL225CP40889 1758 aa12.48□□□□□ -0.41
PLB1YMR008C APC1P53886 1748 aa12.47□□□□□ -0.41
PLB1YMR008C YRF1-2P40105 1681 aa12.47□□□□□ -0.41
PLB1YMR008C YRF1-4O13559 1382 aa12.46□□□□□ -0.41
PLB1YMR008C RRP5Q05022 1729 aaKnown RBP12.45□□□□□ -0.42
PLB1YMR008C RAD2P07276 1031 aa12.45□□□□□ -0.42
PLB1YMR008C YIL092WP40497 633 aa12.44□□□□□ -0.42
PLB1YMR008C SIR4P11978 1358 aa12.44□□□□□ -0.42
PLB1YMR008C DSD1P53095 428 aa12.43□□□□□ -0.42
PLB1YMR008C PRP5P21372 849 aaPredicted RBP12.43□□□□□ -0.42
PLB1YMR008C DAL5P15365 543 aa12.42□□□□□ -0.42
PLB1YMR008C MIF2P35201 549 aa12.42□□□□□ -0.42
PLB1YMR008C PRP45P28004 379 aaPredicted RBP12.41□□□□□ -0.42
PLB1YMR008C YNL050CP53952 270 aa12.4□□□□□ -0.42
PLB1YMR008C SLM3Q12093 417 aa12.39□□□□□ -0.43
PLB1YMR008C NTH2P35172 780 aa12.39□□□□□ -0.43
PLB1YMR008C PTP3P40048 928 aa12.39□□□□□ -0.43
PLB1YMR008C BUD27P43573 796 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
PLB1YMR008C MSB3P48566 633 aaPredicted RBP12.39□□□□□ -0.43
PLB1YMR008C MAK21Q12176 1025 aaKnown RBP12.39□□□□□ -0.43
PLB1YMR008C RPC31P17890 251 aa12.38□□□□□ -0.43
PLB1YMR008C URB1P34241 1764 aaKnown RBP12.37□□□□□ -0.43
PLB1YMR008C HSP104P31539 908 aaKnown RBP12.37□□□□□ -0.43
PLB1YMR008C FKS3Q04952 1785 aa12.36□□□□□ -0.43
PLB1YMR008C GYP7P48365 746 aa12.36□□□□□ -0.43
PLB1YMR008C RRT14P40470 206 aa12.35□□□□□ -0.43
PLB1YMR008C ZDS1P50111 915 aaKnown RBP12.35□□□□□ -0.43
PLB1YMR008C POL32P47110 350 aa12.34□□□□□ -0.43
PLB1YMR008C MAM1P40065 302 aa12.32□□□□□ -0.44
PLB1YMR008C AOS1Q06624 347 aa12.31□□□□□ -0.44
PLB1YMR008C CTF4Q01454 927 aa12.3□□□□□ -0.44
PLB1YMR008C TCB1Q12466 1186 aa12.3□□□□□ -0.44
PLB1YMR008C XKS1P42826 600 aa12.3□□□□□ -0.44
PLB1YMR008C SRT1Q03175 343 aa12.3□□□□□ -0.44
PLB1YMR008C RCR1P38212 213 aa12.29□□□□□ -0.44
PLB1YMR008C PUF6Q04373 656 aaKnown RBP12.29□□□□□ -0.44
PLB1YMR008C YBR287WP38355 427 aa12.28□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms