RNA–Protein interactions for RNA: YML072C

TCB3, Transcript of Cortical ER protein involved in ER-plasma membrane tethering, yeast

Gene TCB3, Length 4,638 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCB3	YML072C	PTP3	P40048	928 aa		5.1	□□□□□ -1.59
TCB3	YML072C	GLN1	P32288	370 aa	Known RBP	5.1	□□□□□ -1.59
TCB3	YML072C	ALD2	P47771	506 aa		5.1	□□□□□ -1.59
TCB3	YML072C	KRE5	P22023	1365 aa		5.09	□□□□□ -1.59
TCB3	YML072C	YBT1	P32386	1661 aa		5.09	□□□□□ -1.59
TCB3	YML072C	BCK1	Q01389	1478 aa		5.09	□□□□□ -1.59
TCB3	YML072C	RRT14	P40470	206 aa		5.08	□□□□□ -1.6
TCB3	YML072C	CAB1	Q04430	367 aa		5.08	□□□□□ -1.6
TCB3	YML072C	ENV9	Q08651	330 aa		5.07	□□□□□ -1.6
TCB3	YML072C	PRP45	P28004	379 aa	Predicted RBP	5.06	□□□□□ -1.6
TCB3	YML072C	TCB1	Q12466	1186 aa		5.06	□□□□□ -1.6
TCB3	YML072C	REB1	P21538	810 aa		5.06	□□□□□ -1.6
TCB3	YML072C	ROM2	P51862	1356 aa	Known RBP	5.05	□□□□□ -1.6
TCB3	YML072C	MTR4	P47047	1073 aa	Known RBP	5.05	□□□□□ -1.6
TCB3	YML072C	PRP5	P21372	849 aa	Predicted RBP	5.05	□□□□□ -1.6
TCB3	YML072C	ALD3	P54114	506 aa		5.05	□□□□□ -1.6
TCB3	YML072C	TAF8	Q03750	510 aa		5.05	□□□□□ -1.6
TCB3	YML072C	GCN2	P15442	1659 aa		5.03	□□□□□ -1.6
TCB3	YML072C	APP1	P53933	587 aa		5.03	□□□□□ -1.6
TCB3	YML072C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
TCB3	YML072C	LEU2	P04173	364 aa	Predicted RBP	5.02	□□□□□ -1.61
TCB3	YML072C	CSE4	P36012	229 aa		5.02	□□□□□ -1.61
TCB3	YML072C	RPS9B	P05755	195 aa	Known RBP	5.01	□□□□□ -1.61
TCB3	YML072C	BUD31	P25337	157 aa	Predicted RBP	5.01	□□□□□ -1.61
TCB3	YML072C	IES2	P40154	320 aa		5.01	□□□□□ -1.61
TCB3	YML072C	SPE2	P21182	396 aa		5.01	□□□□□ -1.61
TCB3	YML072C	CHZ1	P40019	153 aa	Predicted RBP	5.01	□□□□□ -1.61
TCB3	YML072C	PDI1	P17967	522 aa	Known RBP	5	□□□□□ -1.61
TCB3	YML072C	SSM4	P40318	1319 aa		5	□□□□□ -1.61
TCB3	YML072C	SAP155	P43612	1002 aa		5	□□□□□ -1.61
TCB3	YML072C	PSK1	P31374	1356 aa		4.99	□□□□□ -1.61
TCB3	YML072C	CPS1	P27614	576 aa		4.99	□□□□□ -1.61
TCB3	YML072C	GRX4	P32642	244 aa		4.99	□□□□□ -1.61
TCB3	YML072C	MDG1	P53885	366 aa		4.98	□□□□□ -1.61
TCB3	YML072C	RCM1	P53972	490 aa		4.98	□□□□□ -1.61
TCB3	YML072C	ATG13	Q06628	738 aa		4.98	□□□□□ -1.61
TCB3	YML072C	RSF2	P46974	1380 aa		4.97	□□□□□ -1.61
TCB3	YML072C	SSA2	P10592	639 aa	Known RBP	4.97	□□□□□ -1.61
TCB3	YML072C	YKL133C	P36066	463 aa		4.96	□□□□□ -1.61
TCB3	YML072C	KIP3	P53086	805 aa	Known RBP	4.96	□□□□□ -1.61
TCB3	YML072C	BUG1	Q12191	341 aa		4.96	□□□□□ -1.61
TCB3	YML072C	YFR016C	P43597	1233 aa	Known RBP	4.96	□□□□□ -1.62
TCB3	YML072C	YLR419W	Q06698	1435 aa	Known RBP	4.96	□□□□□ -1.62
TCB3	YML072C	BDF1	P35817	686 aa		4.96	□□□□□ -1.62
TCB3	YML072C	YBL086C	P38177	466 aa		4.96	□□□□□ -1.62
TCB3	YML072C	USO1	P25386	1790 aa		4.94	□□□□□ -1.62
TCB3	YML072C	HPC2	Q01448	625 aa		4.94	□□□□□ -1.62
TCB3	YML072C	SLM3	Q12093	417 aa		4.94	□□□□□ -1.62
TCB3	YML072C	SSA1	P10591	642 aa	Known RBP	4.93	□□□□□ -1.62
TCB3	YML072C	XKS1	P42826	600 aa		4.93	□□□□□ -1.62
TCB3	YML072C	GRX1	P25373	110 aa	Known RBP	4.93	□□□□□ -1.62
TCB3	YML072C	CTF4	Q01454	927 aa		4.93	□□□□□ -1.62
TCB3	YML072C	MSB4	Q12317	492 aa		4.93	□□□□□ -1.62
TCB3	YML072C	AVT3	P36062	692 aa		4.93	□□□□□ -1.62
TCB3	YML072C	RPN11	P43588	306 aa	Known RBP	4.92	□□□□□ -1.62
TCB3	YML072C	KAR2	P16474	682 aa	Known RBP	4.92	□□□□□ -1.62
TCB3	YML072C	POL5	P39985	1022 aa	Known RBP	4.92	□□□□□ -1.62
TCB3	YML072C	PRP43	P53131	767 aa	Known RBP	4.92	□□□□□ -1.62
TCB3	YML072C	DIB1	Q06819	143 aa	Predicted RBP	4.91	□□□□□ -1.62
TCB3	YML072C	DPS1	P04802	557 aa	Known RBP	4.9	□□□□□ -1.62
TCB3	YML072C	UTP22	P53254	1237 aa	Predicted RBP	4.9	□□□□□ -1.62
TCB3	YML072C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.89	□□□□□ -1.63
TCB3	YML072C	YRF1-4	O13559	1382 aa		4.89	□□□□□ -1.63
TCB3	YML072C	ADE6	P38972	1358 aa	Known RBP	4.88	□□□□□ -1.63
TCB3	YML072C	SEC3	P33332	1336 aa	Known RBP	4.88	□□□□□ -1.63
TCB3	YML072C	RPS24A	P0CX31	135 aa	Known RBP	4.88	□□□□□ -1.63
TCB3	YML072C	RPS24B	P0CX32	135 aa	Known RBP	4.88	□□□□□ -1.63
TCB3	YML072C	YBP2	P53169	641 aa		4.88	□□□□□ -1.63
TCB3	YML072C	PAP2	P53632	584 aa	Known RBP	4.88	□□□□□ -1.63
TCB3	YML072C	NUP192	P47054	1683 aa		4.88	□□□□□ -1.63
TCB3	YML072C	SUP35	P05453	685 aa	Known RBP	4.87	□□□□□ -1.63
TCB3	YML072C	RAD4	P14736	754 aa		4.87	□□□□□ -1.63
TCB3	YML072C	MSB3	P48566	633 aa	Predicted RBP	4.87	□□□□□ -1.63
TCB3	YML072C	CTT1	P06115	562 aa		4.87	□□□□□ -1.63
TCB3	YML072C	TIF4632	P39936	914 aa	Known RBP	4.87	□□□□□ -1.63
TCB3	YML072C	TAP42	Q04372	366 aa		4.87	□□□□□ -1.63
TCB3	YML072C	SIR4	P11978	1358 aa		4.87	□□□□□ -1.63
TCB3	YML072C	YER156C	P40093	338 aa	Known RBP	4.86	□□□□□ -1.63
TCB3	YML072C	AOS1	Q06624	347 aa		4.86	□□□□□ -1.63
TCB3	YML072C	IRC3	Q06683	689 aa		4.86	□□□□□ -1.63
TCB3	YML072C	NSE3	Q05541	303 aa		4.85	□□□□□ -1.63
TCB3	YML072C	YKL222C	P35995	705 aa		4.85	□□□□□ -1.63
TCB3	YML072C	DOT5	P40553	215 aa		4.85	□□□□□ -1.63
TCB3	YML072C	RMT2	Q03305	412 aa		4.85	□□□□□ -1.63
TCB3	YML072C	COB	P00163	385 aa		4.85	□□□□□ -1.63
TCB3	YML072C	MSN5	P52918	1224 aa		4.85	□□□□□ -1.63
TCB3	YML072C	PPH3	P32345	308 aa		4.84	□□□□□ -1.63
TCB3	YML072C	RPG1	P38249	964 aa	Known RBP	4.84	□□□□□ -1.63
TCB3	YML072C	PEX21	P50091	288 aa		4.84	□□□□□ -1.63
TCB3	YML072C	ORC1	P54784	914 aa	Predicted RBP	4.84	□□□□□ -1.63
TCB3	YML072C	MHP1	P43638	1398 aa		4.84	□□□□□ -1.64
TCB3	YML072C	GRX6	Q12438	231 aa		4.83	□□□□□ -1.64
TCB3	YML072C	GAS4	Q08271	471 aa		4.83	□□□□□ -1.64
TCB3	YML072C	TFA1	P36100	482 aa		4.82	□□□□□ -1.64
TCB3	YML072C	FOX2	Q02207	900 aa	Known RBP	4.82	□□□□□ -1.64
TCB3	YML072C	RAT1	Q02792	1006 aa	Known RBP	4.82	□□□□□ -1.64
TCB3	YML072C	SSP2	Q08646	371 aa		4.82	□□□□□ -1.64
TCB3	YML072C	UBX2	Q04228	584 aa		4.82	□□□□□ -1.64
TCB3	YML072C	YRF1-2	P40105	1681 aa		4.82	□□□□□ -1.64
TCB3	YML072C	UGA3	P26370	528 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms