RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A MHP1P43638 1398 aa17■□□□□ 0.31
LSM3YLR438C-A PSK1P31374 1356 aa16.98■□□□□ 0.31
LSM3YLR438C-A PDS5Q04264 1277 aa16.94■□□□□ 0.3
LSM3YLR438C-A PTP3P40048 928 aa16.93■□□□□ 0.3
LSM3YLR438C-A LEU2P04173 364 aaPredicted RBP16.92■□□□□ 0.3
LSM3YLR438C-A FKH1P40466 484 aa16.88■□□□□ 0.29
LSM3YLR438C-A MTR4P47047 1073 aaKnown RBP16.88■□□□□ 0.29
LSM3YLR438C-A RTG3P38165 486 aa16.87■□□□□ 0.29
LSM3YLR438C-A CSE4P36012 229 aa16.83■□□□□ 0.28
LSM3YLR438C-A PRP45P28004 379 aaPredicted RBP16.81■□□□□ 0.28
LSM3YLR438C-A YAH1Q12184 172 aaKnown RBP16.81■□□□□ 0.28
LSM3YLR438C-A ADE6P38972 1358 aaKnown RBP16.79■□□□□ 0.28
LSM3YLR438C-A SEC3P33332 1336 aaKnown RBP16.78■□□□□ 0.28
LSM3YLR438C-A RPS24AP0CX31 135 aaKnown RBP16.77■□□□□ 0.28
LSM3YLR438C-A RPS24BP0CX32 135 aaKnown RBP16.77■□□□□ 0.28
LSM3YLR438C-A PRP5P21372 849 aaPredicted RBP16.76■□□□□ 0.27
LSM3YLR438C-A PRP43P53131 767 aaKnown RBP16.76■□□□□ 0.27
LSM3YLR438C-A YML133CQ03099 1374 aa16.76■□□□□ 0.27
LSM3YLR438C-A YLL067CQ07888 1374 aa16.76■□□□□ 0.27
LSM3YLR438C-A YLL066CQ99208 1374 aa16.76■□□□□ 0.27
LSM3YLR438C-A RTF1P53064 558 aa16.75■□□□□ 0.27
LSM3YLR438C-A ENT1Q12518 454 aa16.75■□□□□ 0.27
LSM3YLR438C-A APP1P53933 587 aa16.74■□□□□ 0.27
LSM3YLR438C-A PDI1P17967 522 aaKnown RBP16.73■□□□□ 0.27
LSM3YLR438C-A REB1P21538 810 aa16.73■□□□□ 0.27
LSM3YLR438C-A PSD2P53037 1138 aaKnown RBP16.71■□□□□ 0.27
LSM3YLR438C-A MLP1Q02455 1875 aaKnown RBP16.68■□□□□ 0.26
LSM3YLR438C-A LEU3P08638 886 aa16.67■□□□□ 0.26
LSM3YLR438C-A SPT7P35177 1332 aa16.67■□□□□ 0.26
LSM3YLR438C-A ENV9Q08651 330 aa16.66■□□□□ 0.26
LSM3YLR438C-A TAP42Q04372 366 aa16.65■□□□□ 0.26
LSM3YLR438C-A GRX4P32642 244 aa16.64■□□□□ 0.25
LSM3YLR438C-A GAS4Q08271 471 aa16.64■□□□□ 0.25
LSM3YLR438C-A DPS1P04802 557 aaKnown RBP16.63■□□□□ 0.25
LSM3YLR438C-A MSB3P48566 633 aaPredicted RBP16.63■□□□□ 0.25
LSM3YLR438C-A KAR2P16474 682 aaKnown RBP16.62■□□□□ 0.25
LSM3YLR438C-A SLM3Q12093 417 aa16.6■□□□□ 0.25
LSM3YLR438C-A TCB1Q12466 1186 aa16.6■□□□□ 0.25
LSM3YLR438C-A NST1P53935 1240 aa16.59■□□□□ 0.25
LSM3YLR438C-A RRP5Q05022 1729 aaKnown RBP16.58■□□□□ 0.24
LSM3YLR438C-A TY4B-HP0C2J7 1802 aa16.57■□□□□ 0.24
LSM3YLR438C-A TY4B-JP47024 1803 aa16.57■□□□□ 0.24
LSM3YLR438C-A HIM1Q06674 414 aa16.56■□□□□ 0.24
LSM3YLR438C-A IMH1Q06704 911 aaKnown RBP16.56■□□□□ 0.24
LSM3YLR438C-A ENP1P38333 483 aaKnown RBP16.54■□□□□ 0.24
LSM3YLR438C-A YIL055CP40523 627 aaKnown RBP16.54■□□□□ 0.24
LSM3YLR438C-A YEF3P16521 1044 aaKnown RBP16.53■□□□□ 0.24
LSM3YLR438C-A PAP2P53632 584 aaKnown RBP16.53■□□□□ 0.24
LSM3YLR438C-A TRK1P12685 1235 aa16.5■□□□□ 0.23
LSM3YLR438C-A AUS1Q08409 1394 aa16.5■□□□□ 0.23
LSM3YLR438C-A XKS1P42826 600 aa16.49■□□□□ 0.23
LSM3YLR438C-A IES2P40154 320 aa16.48■□□□□ 0.23
LSM3YLR438C-A RSF2P46974 1380 aa16.45■□□□□ 0.22
LSM3YLR438C-A RPO41P13433 1351 aaKnown RBP16.4■□□□□ 0.22
LSM3YLR438C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data16.4■□□□□ 0.22not detected
LSM3YLR438C-A YRF1-2P40105 1681 aa16.39■□□□□ 0.21
LSM3YLR438C-A YKL133CP36066 463 aa16.36■□□□□ 0.21
LSM3YLR438C-A IOC4Q04213 475 aa16.36■□□□□ 0.21
LSM3YLR438C-A GLN1P32288 370 aaKnown RBP16.35■□□□□ 0.21
LSM3YLR438C-A RCR1P38212 213 aa16.34■□□□□ 0.21
LSM3YLR438C-A MEC3Q02574 474 aa16.34■□□□□ 0.21
LSM3YLR438C-A RTR1P40084 226 aaPredicted RBP16.33■□□□□ 0.2
LSM3YLR438C-A AKL1P38080 1108 aaKnown RBP16.32■□□□□ 0.2
LSM3YLR438C-A DSD1P53095 428 aa16.32■□□□□ 0.2
LSM3YLR438C-A ROM2P51862 1356 aaKnown RBP16.31■□□□□ 0.2
LSM3YLR438C-A YMR074CQ04773 145 aa16.31■□□□□ 0.2
LSM3YLR438C-A HSP104P31539 908 aaKnown RBP16.29■□□□□ 0.2
LSM3YLR438C-A DOT5P40553 215 aa16.29■□□□□ 0.2
LSM3YLR438C-A RRP46P53256 223 aaPredicted RBP16.29■□□□□ 0.2
LSM3YLR438C-A SIR4P11978 1358 aa16.27■□□□□ 0.2
LSM3YLR438C-A YIL177CP40434 1758 aa16.26■□□□□ 0.19
LSM3YLR438C-A YJL225CP40889 1758 aa16.26■□□□□ 0.19
LSM3YLR438C-A FKS3Q04952 1785 aa16.26■□□□□ 0.19
LSM3YLR438C-A CTF4Q01454 927 aa16.26■□□□□ 0.19
LSM3YLR438C-A YDL144CQ07589 356 aa16.25■□□□□ 0.19
LSM3YLR438C-A URB1P34241 1764 aaKnown RBP16.24■□□□□ 0.19
LSM3YLR438C-A YJL181WP46987 611 aa16.24■□□□□ 0.19
LSM3YLR438C-A APC1P53886 1748 aa16.23■□□□□ 0.19
LSM3YLR438C-A FOX2Q02207 900 aaKnown RBP16.23■□□□□ 0.19
LSM3YLR438C-A AOS1Q06624 347 aa16.23■□□□□ 0.19
LSM3YLR438C-A LAM6Q08001 693 aa16.23■□□□□ 0.19
LSM3YLR438C-A PRD1P25375 712 aa16.22■□□□□ 0.19
LSM3YLR438C-A COBP00163 385 aa16.21■□□□□ 0.19
LSM3YLR438C-A MPP10P47083 593 aaKnown RBP16.21■□□□□ 0.19
LSM3YLR438C-A ATG13Q06628 738 aa16.21■□□□□ 0.19
LSM3YLR438C-A YRF1-4O13559 1382 aa16.21■□□□□ 0.19
LSM3YLR438C-A RPN11P43588 306 aaKnown RBP16.2■□□□□ 0.18
LSM3YLR438C-A ADE16P54113 591 aaKnown RBP16.2■□□□□ 0.18
LSM3YLR438C-A FRK1Q03002 865 aaPredicted RBP16.2■□□□□ 0.18
LSM3YLR438C-A RPP0P05317 312 aaKnown RBP16.19■□□□□ 0.18
LSM3YLR438C-A UBP1P25037 809 aa16.19■□□□□ 0.18
LSM3YLR438C-A PRP40P33203 583 aaKnown RBP16.18■□□□□ 0.18
LSM3YLR438C-A INP54Q08227 384 aaKnown RBP16.18■□□□□ 0.18
LSM3YLR438C-A NTH2P35172 780 aa16.17■□□□□ 0.18
LSM3YLR438C-A NSR1P27476 414 aaKnown RBP RIP-Chip data16.16■□□□□ 0.18 RIP-Chip
LSM3YLR438C-A OSM1P21375 501 aaKnown RBP16.15■□□□□ 0.18
LSM3YLR438C-A YRF1-3P0CX14 1859 aa16.14■□□□□ 0.17
LSM3YLR438C-A YRF1-7P0CX15 1859 aa16.14■□□□□ 0.17
LSM3YLR438C-A YRF1-6P53819 1859 aa16.14■□□□□ 0.17
LSM3YLR438C-A SNF2P22082 1703 aa16.14■□□□□ 0.17
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms