RNA–Protein interactions for RNA: YLR299W

ECM38, Transcript of Gamma-glutamyltranspeptidase, yeastyeast

Gene ECM38, Length 1,983 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM38YLR299W AVT3P36062 692 aa8.16□□□□□ -1.1
ECM38YLR299W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
ECM38YLR299W DOP1Q03921 1698 aa8.15□□□□□ -1.11
ECM38YLR299W CTR9P89105 1077 aa8.15□□□□□ -1.11
ECM38YLR299W VPS24P36095 224 aaKnown RBP8.14□□□□□ -1.11
ECM38YLR299W NOT3P06102 836 aaKnown RBP8.13□□□□□ -1.11
ECM38YLR299W KNS1P32350 737 aaPredicted RBP8.13□□□□□ -1.11
ECM38YLR299W TRK1P12685 1235 aa8.13□□□□□ -1.11
ECM38YLR299W RTG3P38165 486 aa8.13□□□□□ -1.11
ECM38YLR299W YEF3P16521 1044 aaKnown RBP8.11□□□□□ -1.11
ECM38YLR299W ESL2P36168 1195 aa8.11□□□□□ -1.11
ECM38YLR299W MPP10P47083 593 aaKnown RBP8.11□□□□□ -1.11
ECM38YLR299W TRM3Q07527 1436 aa8.11□□□□□ -1.11
ECM38YLR299W DMA1P38823 416 aa8.11□□□□□ -1.11
ECM38YLR299W CHC1P22137 1653 aaKnown RBP8.11□□□□□ -1.11
ECM38YLR299W QCR6P00127 147 aa8.1□□□□□ -1.11
ECM38YLR299W ARL1P38116 183 aaKnown RBP8.1□□□□□ -1.11
ECM38YLR299W MET10P39692 1035 aa8.09□□□□□ -1.11
ECM38YLR299W NUP192P47054 1683 aa8.09□□□□□ -1.11
ECM38YLR299W LSP1Q12230 341 aaKnown RBP8.08□□□□□ -1.12
ECM38YLR299W AIM44Q99299 758 aa8.08□□□□□ -1.12
ECM38YLR299W HAP1P0CE41 1502 aa8.07□□□□□ -1.12
ECM38YLR299W SPE2P21182 396 aa8.07□□□□□ -1.12
ECM38YLR299W NAP1P25293 417 aaKnown RBP8.07□□□□□ -1.12
ECM38YLR299W YPP1P46951 817 aa8.07□□□□□ -1.12
ECM38YLR299W SNF2P22082 1703 aa8.06□□□□□ -1.12
ECM38YLR299W RAD2P07276 1031 aa8.06□□□□□ -1.12
ECM38YLR299W TEA1P47988 759 aa8.06□□□□□ -1.12
ECM38YLR299W YGR130CP53278 816 aa8.06□□□□□ -1.12
ECM38YLR299W VMR1P38735 1592 aa8.05□□□□□ -1.12
ECM38YLR299W FKH1P40466 484 aa8.05□□□□□ -1.12
ECM38YLR299W YIL092WP40497 633 aa8.05□□□□□ -1.12
ECM38YLR299W POL32P47110 350 aa8.05□□□□□ -1.12
ECM38YLR299W DIP2Q12220 943 aaPredicted RBP8.05□□□□□ -1.12
ECM38YLR299W NOP58Q12499 511 aaKnown RBP8.05□□□□□ -1.12
ECM38YLR299W RRP46P53256 223 aaPredicted RBP8.04□□□□□ -1.12
ECM38YLR299W SAP155P43612 1002 aa8.04□□□□□ -1.12
ECM38YLR299W RLF2Q12495 606 aa8.04□□□□□ -1.12
ECM38YLR299W BNR1P40450 1375 aa8.03□□□□□ -1.12
ECM38YLR299W MLP1Q02455 1875 aaKnown RBP8.02□□□□□ -1.12
ECM38YLR299W DAL5P15365 543 aa8.02□□□□□ -1.12
ECM38YLR299W SCT1P32784 759 aa8.02□□□□□ -1.12
ECM38YLR299W IML1P47170 1584 aa8.02□□□□□ -1.13
ECM38YLR299W YAP3P38749 330 aa8.01□□□□□ -1.13
ECM38YLR299W BUD27P43573 796 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
ECM38YLR299W KRE5P22023 1365 aa7.99□□□□□ -1.13
ECM38YLR299W RTR1P40084 226 aaPredicted RBP7.99□□□□□ -1.13
ECM38YLR299W THI22Q06490 572 aa7.98□□□□□ -1.13
ECM38YLR299W TPD3P31383 635 aa7.97□□□□□ -1.13
ECM38YLR299W SPT21P35209 758 aa7.97□□□□□ -1.13
ECM38YLR299W CHZ1P40019 153 aaPredicted RBP7.97□□□□□ -1.13
ECM38YLR299W ITC1P53125 1264 aa7.97□□□□□ -1.13
ECM38YLR299W HEF3P53978 1044 aaKnown RBP7.97□□□□□ -1.13
ECM38YLR299W SEC7P11075 2009 aaKnown RBP7.97□□□□□ -1.13
ECM38YLR299W YRF1-1P0CX20 1796 aa7.97□□□□□ -1.13
ECM38YLR299W YRF1-5P0CX21 1796 aa7.97□□□□□ -1.13
ECM38YLR299W YRF1-8P0CX22 1796 aa7.97□□□□□ -1.13
ECM38YLR299W HAP5Q02516 242 aa7.97□□□□□ -1.13
ECM38YLR299W YML133CQ03099 1374 aa7.96□□□□□ -1.13
ECM38YLR299W YLL067CQ07888 1374 aa7.96□□□□□ -1.13
ECM38YLR299W YLL066CQ99208 1374 aa7.96□□□□□ -1.13
ECM38YLR299W PUF6Q04373 656 aaKnown RBP7.95□□□□□ -1.14
ECM38YLR299W LCD1Q04377 747 aa7.95□□□□□ -1.14
ECM38YLR299W RSC1P53236 928 aa7.95□□□□□ -1.14
ECM38YLR299W SRS2P12954 1174 aa7.94□□□□□ -1.14
ECM38YLR299W TAF8Q03750 510 aa7.93□□□□□ -1.14
ECM38YLR299W PRD1P25375 712 aa7.93□□□□□ -1.14
ECM38YLR299W RKM3P38222 552 aa7.93□□□□□ -1.14
ECM38YLR299W RAD26P40352 1085 aa7.93□□□□□ -1.14
ECM38YLR299W PIL1P53252 339 aaKnown RBP7.93□□□□□ -1.14
ECM38YLR299W YRF1-4O13559 1382 aa7.93□□□□□ -1.14
ECM38YLR299W SIR4P11978 1358 aa7.93□□□□□ -1.14
ECM38YLR299W RRT14P40470 206 aa7.92□□□□□ -1.14
ECM38YLR299W NUP188P52593 1655 aaKnown RBP7.92□□□□□ -1.14
ECM38YLR299W MCM2P29469 868 aa7.91□□□□□ -1.14
ECM38YLR299W CSE4P36012 229 aa7.91□□□□□ -1.14
ECM38YLR299W ROM2P51862 1356 aaKnown RBP7.91□□□□□ -1.14
ECM38YLR299W RPN1P38764 993 aaKnown RBP7.9□□□□□ -1.14
ECM38YLR299W NUP145P49687 1317 aa7.9□□□□□ -1.15
ECM38YLR299W RTT109Q07794 436 aa7.9□□□□□ -1.15
ECM38YLR299W NOP53Q12080 455 aaKnown RBP7.9□□□□□ -1.15
ECM38YLR299W TPM2P40414 161 aa7.89□□□□□ -1.15
ECM38YLR299W COG8Q04632 607 aa7.89□□□□□ -1.15
ECM38YLR299W CIR1P42940 261 aa7.88□□□□□ -1.15
ECM38YLR299W MDG1P53885 366 aa7.88□□□□□ -1.15
ECM38YLR299W BCK1Q01389 1478 aa7.88□□□□□ -1.15
ECM38YLR299W RAD9P14737 1309 aa7.88□□□□□ -1.15
ECM38YLR299W ILV3P39522 585 aaKnown RBP7.88□□□□□ -1.15
ECM38YLR299W DNF3Q12674 1656 aa7.87□□□□□ -1.15
ECM38YLR299W NPA3P47122 385 aa7.87□□□□□ -1.15
ECM38YLR299W PSK1P31374 1356 aa7.87□□□□□ -1.15
ECM38YLR299W DLD1P32891 587 aa7.86□□□□□ -1.15
ECM38YLR299W BDH2P39713 417 aa7.86□□□□□ -1.15
ECM38YLR299W SMC3P47037 1230 aa7.86□□□□□ -1.15
ECM38YLR299W KRE33P53914 1056 aaKnown RBP7.86□□□□□ -1.15
ECM38YLR299W MAK21Q12176 1025 aaKnown RBP7.86□□□□□ -1.15
ECM38YLR299W TRP5P00931 707 aaKnown RBP7.86□□□□□ -1.15
ECM38YLR299W RPN12P32496 274 aa7.85□□□□□ -1.15
ECM38YLR299W RVS167P39743 482 aaKnown RBP7.85□□□□□ -1.15
ECM38YLR299W ALD4P46367 519 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms