RNA–Protein interactions for RNA: YLR264W

RPS28B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS28B, Length 204 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS28B	YLR264W	BOI2	P39969	1040 aa		3.78	□□□□□ -1.8
RPS28B	YLR264W	MSH4	P40965	878 aa	Predicted RBP	3.78	□□□□□ -1.8
RPS28B	YLR264W	RSC8	P43609	557 aa	Known RBP	3.78	□□□□□ -1.8
RPS28B	YLR264W	IMH1	Q06704	911 aa	Known RBP	3.78	□□□□□ -1.8
RPS28B	YLR264W	ERP4	Q12450	207 aa		3.78	□□□□□ -1.8
RPS28B	YLR264W	SEC3	P33332	1336 aa	Known RBP	3.77	□□□□□ -1.81
RPS28B	YLR264W	VMA4	P22203	233 aa	Known RBP	3.77	□□□□□ -1.81
RPS28B	YLR264W	RPL5	P26321	297 aa	Known RBP	3.77	□□□□□ -1.81
RPS28B	YLR264W	MUM2	P38236	366 aa		3.77	□□□□□ -1.81
RPS28B	YLR264W	ALD4	P46367	519 aa	Known RBP	3.77	□□□□□ -1.81
RPS28B	YLR264W	HOS2	P53096	452 aa	Predicted RBP	3.77	□□□□□ -1.81
RPS28B	YLR264W	ALD3	P54114	506 aa		3.77	□□□□□ -1.81
RPS28B	YLR264W	GGA1	Q06336	557 aa		3.77	□□□□□ -1.81
RPS28B	YLR264W	SGT2	Q12118	346 aa	Known RBP	3.77	□□□□□ -1.81
RPS28B	YLR264W	VPS5	Q92331	675 aa		3.77	□□□□□ -1.81
RPS28B	YLR264W	KIN1	P13185	1064 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	STE5	P32917	917 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	YGL015C	P33199	130 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
RPS28B	YLR264W	LTV1	P34078	463 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	SLD2	P34252	453 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	SIC1	P38634	284 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	OCA5	P38738	679 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	TPM2	P40414	161 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	BNI5	P53890	448 aa	Known RBP	3.76	□□□□□ -1.81
RPS28B	YLR264W	CTF4	Q01454	927 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	VTC3	Q02725	835 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	ENT2	Q05785	613 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	RPN7	Q06103	429 aa	Known RBP	3.76	□□□□□ -1.81
RPS28B	YLR264W	RSC2	Q06488	889 aa		3.76	□□□□□ -1.81
RPS28B	YLR264W	RRP15	Q06511	250 aa	Predicted RBP	3.76	□□□□□ -1.81
RPS28B	YLR264W	RIX7	Q07844	837 aa	Known RBP	3.76	□□□□□ -1.81
RPS28B	YLR264W	CLN1	P20437	546 aa		3.75	□□□□□ -1.81
RPS28B	YLR264W	MRPL32	P25348	183 aa		3.75	□□□□□ -1.81
RPS28B	YLR264W	PWP2	P25635	923 aa	Known RBP	3.75	□□□□□ -1.81
RPS28B	YLR264W	RRN6	P32786	894 aa		3.75	□□□□□ -1.81
RPS28B	YLR264W	RIA1	P53893	1110 aa		3.75	□□□□□ -1.81
RPS28B	YLR264W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
RPS28B	YLR264W	SAC3	P46674	1301 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	CLC1	P17891	233 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	TSR4	P25040	408 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	MSH3	P25336	1018 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	MRF1	P30775	413 aa	Predicted RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	DEP1	P31385	405 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	MET1	P36150	593 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	MAL31	P38156	614 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	YMR124W	P39523	943 aa	Known RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	FAF1	P40546	346 aa	Predicted RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	ESF2	P53743	316 aa	Known RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	COG4	Q06096	861 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	JIP5	Q06214	492 aa	Predicted RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	NFI1	Q12216	726 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	SNU66	Q12420	587 aa	Predicted RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	CEX1	Q12453	761 aa		3.74	□□□□□ -1.81
RPS28B	YLR264W	NOP58	Q12499	511 aa	Known RBP	3.74	□□□□□ -1.81
RPS28B	YLR264W	CHD1	P32657	1468 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	CYB2	P00175	591 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	KAR1	P11927	433 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	RPC82	P32349	654 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	NFU1	P32860	256 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	TPS3	P38426	1054 aa	Known RBP	3.73	□□□□□ -1.81
RPS28B	YLR264W	PES4	P39684	611 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	VHR2	P40041	505 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	IES2	P40154	320 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	MEP1	P40260	492 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	HGH1	P48362	394 aa	Known RBP	3.73	□□□□□ -1.81
RPS28B	YLR264W	KEL2	P50090	882 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	MDM1	Q01846	1127 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	PSR1	Q07800	427 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	APC5	Q08683	685 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	SSF2	Q12153	453 aa	Predicted RBP	3.73	□□□□□ -1.81
RPS28B	YLR264W	MAM3	Q12296	706 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	YVC1	Q12324	675 aa		3.73	□□□□□ -1.81
RPS28B	YLR264W	CDC31	P06704	161 aa	Known RBP	3.72	□□□□□ -1.81
RPS28B	YLR264W	SPB4	P25808	606 aa	Predicted RBP	3.72	□□□□□ -1.81
RPS28B	YLR264W	SWI3	P32591	825 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	OPY1	P38271	328 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	BFA1	P47113	574 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	GPI8	P49018	411 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	RNH70	P53331	553 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	DNM1	P54861	757 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	SRP1	Q02821	542 aa	Known RBP	3.72	□□□□□ -1.81
RPS28B	YLR264W	YOL057W	Q08225	711 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	TCB1	Q12466	1186 aa		3.72	□□□□□ -1.81
RPS28B	YLR264W	MPH3	P0CE00	602 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	BRF1	P29056	596 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	SEC6	P32844	805 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	TFC3	P34111	1160 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	HXT5	P38695	592 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	CCM1	P48237	864 aa	Predicted RBP	3.71	□□□□□ -1.82
RPS28B	YLR264W	GYP7	P48365	746 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	BNI4	P53858	892 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	YNL058C	P53947	316 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	PRP3	Q03338	469 aa	Predicted RBP	3.71	□□□□□ -1.82
RPS28B	YLR264W	ERV41	Q04651	352 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	PHM6	Q05637	104 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	SUB2	Q07478	446 aa	Known RBP	3.71	□□□□□ -1.82
RPS28B	YLR264W	YOR389W	Q08912	624 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	PCL8	Q08966	492 aa		3.71	□□□□□ -1.82
RPS28B	YLR264W	RPL17A	P05740	184 aa	Known RBP	3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms