RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C TY1A-PR1P0CX58 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-ORP0CX59 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-PR2P0CX60 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-DR5P0CX65 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-ER2P0CX66 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-GR3P0CX67 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-LR1P0CX68 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-MR2P0CX69 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-JR2P47099 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-DR1Q03856 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-ML1Q04706 440 aaKnown RBP3.66□□□□□ -1.82
RFX1YLR176C TY1A-BRQ12217 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-NL2Q12470 440 aa3.66□□□□□ -1.82
RFX1YLR176C TY1A-GR2Q12485 440 aa3.66□□□□□ -1.82
RFX1YLR176C KIN1P13185 1064 aa3.66□□□□□ -1.82
RFX1YLR176C CLB5P30283 435 aa3.66□□□□□ -1.82
RFX1YLR176C NUD1P32336 851 aa3.65□□□□□ -1.83
RFX1YLR176C NIS1P53939 407 aa3.63□□□□□ -1.83
RFX1YLR176C ISM1P48526 1002 aa3.63□□□□□ -1.83
RFX1YLR176C NPL4P33755 580 aa3.62□□□□□ -1.83
RFX1YLR176C YMR196WQ04336 1088 aa3.62□□□□□ -1.83
RFX1YLR176C KEX2P13134 814 aa3.61□□□□□ -1.83
RFX1YLR176C CLA4P48562 842 aa3.61□□□□□ -1.83
RFX1YLR176C FPK1P53739 893 aa3.61□□□□□ -1.83
RFX1YLR176C RGA1P39083 1007 aa3.61□□□□□ -1.83
RFX1YLR176C SIT4P20604 311 aa3.6□□□□□ -1.83
RFX1YLR176C ERF2Q06551 359 aa3.6□□□□□ -1.83
RFX1YLR176C AMS1P22855 1083 aa3.6□□□□□ -1.83
RFX1YLR176C GCD11P32481 527 aaKnown RBP3.6□□□□□ -1.83
RFX1YLR176C TYW1Q08960 810 aaKnown RBP3.6□□□□□ -1.83
RFX1YLR176C SCJ1P25303 377 aa3.59□□□□□ -1.83
RFX1YLR176C GUA1P38625 525 aaKnown RBP3.59□□□□□ -1.83
RFX1YLR176C AIR1P40507 360 aaKnown RBP3.59□□□□□ -1.83
RFX1YLR176C CST6P40535 587 aa3.59□□□□□ -1.83
RFX1YLR176C CSN12P47130 423 aa3.59□□□□□ -1.83
RFX1YLR176C HST2P53686 357 aa3.59□□□□□ -1.84
RFX1YLR176C KTR1P27810 393 aaKnown RBP3.58□□□□□ -1.84
RFX1YLR176C GLN1P32288 370 aaKnown RBP3.58□□□□□ -1.84
RFX1YLR176C YNL115CP53925 644 aa3.58□□□□□ -1.84
RFX1YLR176C MMP1Q12372 583 aa3.58□□□□□ -1.84
RFX1YLR176C PRT1P06103 763 aaKnown RBP3.58□□□□□ -1.84
RFX1YLR176C SLY41P22215 453 aa3.58□□□□□ -1.84
RFX1YLR176C RTF1P53064 558 aa3.58□□□□□ -1.84
RFX1YLR176C GYP1Q08484 637 aa3.58□□□□□ -1.84
RFX1YLR176C ESS1P22696 170 aa3.57□□□□□ -1.84
RFX1YLR176C YJU3P28321 313 aa3.55□□□□□ -1.84
RFX1YLR176C AGE1Q04412 482 aa3.55□□□□□ -1.84
RFX1YLR176C SSA2P10592 639 aaKnown RBP3.55□□□□□ -1.84
RFX1YLR176C PKH3Q03306 898 aaPredicted RBP3.55□□□□□ -1.84
RFX1YLR176C RRN7P40992 514 aa3.54□□□□□ -1.84
RFX1YLR176C TUB4P53378 473 aa3.54□□□□□ -1.84
RFX1YLR176C SAS4Q04003 481 aa3.54□□□□□ -1.84
RFX1YLR176C DMA2P53924 522 aa3.53□□□□□ -1.84
RFX1YLR176C HPC2Q01448 625 aa3.53□□□□□ -1.84
RFX1YLR176C LAM6Q08001 693 aa3.53□□□□□ -1.84
RFX1YLR176C MOD5P07884 428 aa3.53□□□□□ -1.84
RFX1YLR176C SPT16P32558 1035 aaKnown RBP3.53□□□□□ -1.84
RFX1YLR176C PAC1P39946 494 aaKnown RBP3.53□□□□□ -1.84
RFX1YLR176C TFB3Q03290 321 aa3.53□□□□□ -1.84
RFX1YLR176C TRM1P15565 570 aaKnown RBP3.52□□□□□ -1.85
RFX1YLR176C ARG8P18544 423 aa3.52□□□□□ -1.85
RFX1YLR176C PAT1P25644 796 aaKnown RBP3.52□□□□□ -1.85
RFX1YLR176C PUS6P53294 404 aa3.52□□□□□ -1.85
RFX1YLR176C TBF1Q02457 562 aa3.52□□□□□ -1.85
RFX1YLR176C RAD59Q12223 238 aa3.52□□□□□ -1.85
RFX1YLR176C BRL1P38770 471 aa3.51□□□□□ -1.85
RFX1YLR176C PKC1P24583 1151 aa3.5□□□□□ -1.85
RFX1YLR176C MRF1P30775 413 aaPredicted RBP3.5□□□□□ -1.85
RFX1YLR176C RSC30P38781 883 aa3.5□□□□□ -1.85
RFX1YLR176C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
RFX1YLR176C YDL206WQ12424 762 aa3.5□□□□□ -1.85
RFX1YLR176C TRK1P12685 1235 aa3.5□□□□□ -1.85
RFX1YLR176C ERG12P07277 443 aa3.49□□□□□ -1.85
RFX1YLR176C BDP1P46678 594 aa3.49□□□□□ -1.85
RFX1YLR176C HGH1P48362 394 aaKnown RBP3.49□□□□□ -1.85
RFX1YLR176C KXD1P53158 218 aa3.49□□□□□ -1.85
RFX1YLR176C YEL077CQ3E7X8 1277 aa3.48□□□□□ -1.85
RFX1YLR176C PDC1P06169 563 aaKnown RBP3.48□□□□□ -1.85
RFX1YLR176C YBL036CP38197 257 aa3.48□□□□□ -1.85
RFX1YLR176C RPA14P50106 137 aa3.48□□□□□ -1.85
RFX1YLR176C FRK1Q03002 865 aaPredicted RBP3.47□□□□□ -1.85
RFX1YLR176C ALR1Q08269 859 aa3.47□□□□□ -1.85
RFX1YLR176C YPR097WQ06839 1073 aa3.46□□□□□ -1.85
RFX1YLR176C HXT10P43581 546 aa3.46□□□□□ -1.86
RFX1YLR176C YJL007CP47080 104 aa3.45□□□□□ -1.86
RFX1YLR176C MAK16P10962 306 aaPredicted RBP3.45□□□□□ -1.86
RFX1YLR176C RRD1P40454 393 aaKnown RBP3.45□□□□□ -1.86
RFX1YLR176C CSE4P36012 229 aa3.44□□□□□ -1.86
RFX1YLR176C PUS5Q06244 254 aa3.44□□□□□ -1.86
RFX1YLR176C YDL176WQ12027 708 aa3.44□□□□□ -1.86
RFX1YLR176C MET32Q12041 191 aa3.44□□□□□ -1.86
RFX1YLR176C TPD3P31383 635 aa3.44□□□□□ -1.86
RFX1YLR176C BIO2P32451 375 aa3.44□□□□□ -1.86
RFX1YLR176C YPL062WQ02781 134 aa3.43□□□□□ -1.86
RFX1YLR176C BIM1P40013 344 aa3.43□□□□□ -1.86
RFX1YLR176C YNL108CP53929 270 aa3.42□□□□□ -1.86
RFX1YLR176C YDJ1P25491 409 aaKnown RBP3.42□□□□□ -1.86
RFX1YLR176C ATG32P40458 529 aa3.42□□□□□ -1.86
RFX1YLR176C FIG4P42837 879 aa3.41□□□□□ -1.86
RFX1YLR176C TEC1P18412 486 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms