RNA–Protein interactions for RNA: YLR121C

YPS3, Transcript of Aspartic protease, yeast

Gene YPS3, Length 1,527 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS3	YLR121C	USO1	P25386	1790 aa		11.88	□□□□□ -0.51
YPS3	YLR121C	CFT1	Q06632	1357 aa	Known RBP	11.88	□□□□□ -0.51
YPS3	YLR121C	YML133C	Q03099	1374 aa		11.85	□□□□□ -0.51
YPS3	YLR121C	YLL067C	Q07888	1374 aa		11.85	□□□□□ -0.51
YPS3	YLR121C	YLL066C	Q99208	1374 aa		11.85	□□□□□ -0.51
YPS3	YLR121C	RCM1	P53972	490 aa		11.84	□□□□□ -0.51
YPS3	YLR121C	PPH3	P32345	308 aa		11.81	□□□□□ -0.52
YPS3	YLR121C	PSK1	P31374	1356 aa		11.8	□□□□□ -0.52
YPS3	YLR121C	TY1B-NL2	Q99337	1749 aa	Known RBP	11.8	□□□□□ -0.52
YPS3	YLR121C	TRK1	P12685	1235 aa		11.79	□□□□□ -0.52
YPS3	YLR121C	YEF3	P16521	1044 aa	Known RBP	11.79	□□□□□ -0.52
YPS3	YLR121C	YNR029C	P53729	429 aa	Known RBP	11.77	□□□□□ -0.52
YPS3	YLR121C	SNF2	P22082	1703 aa		11.75	□□□□□ -0.53
YPS3	YLR121C	CPS1	P27614	576 aa		11.74	□□□□□ -0.53
YPS3	YLR121C	LEU2	P04173	364 aa	Predicted RBP	11.7	□□□□□ -0.54
YPS3	YLR121C	RPP0	P05317	312 aa	Known RBP	11.7	□□□□□ -0.54
YPS3	YLR121C	IOC4	Q04213	475 aa		11.7	□□□□□ -0.54
YPS3	YLR121C	YDL144C	Q07589	356 aa		11.69	□□□□□ -0.54
YPS3	YLR121C	VPS27	P40343	622 aa	Known RBP	11.68	□□□□□ -0.54
YPS3	YLR121C	CDC45	Q08032	650 aa		11.67	□□□□□ -0.54
YPS3	YLR121C	MTR4	P47047	1073 aa	Known RBP	11.66	□□□□□ -0.54
YPS3	YLR121C	KAR2	P16474	682 aa	Known RBP	11.65	□□□□□ -0.54
YPS3	YLR121C	PDI1	P17967	522 aa	Known RBP	11.65	□□□□□ -0.54
YPS3	YLR121C	TY4B-H	P0C2J7	1802 aa		11.65	□□□□□ -0.54
YPS3	YLR121C	TY4B-J	P47024	1803 aa		11.65	□□□□□ -0.54
YPS3	YLR121C	FUN12	P39730	1002 aa	Known RBP	11.65	□□□□□ -0.55
YPS3	YLR121C	TAP42	Q04372	366 aa		11.65	□□□□□ -0.55
YPS3	YLR121C	HIM1	Q06674	414 aa		11.65	□□□□□ -0.55
YPS3	YLR121C	RVB2	Q12464	471 aa	Known RBP	11.65	□□□□□ -0.55
YPS3	YLR121C	MPP10	P47083	593 aa	Known RBP	11.64	□□□□□ -0.55
YPS3	YLR121C	RRP46	P53256	223 aa	Predicted RBP	11.64	□□□□□ -0.55
YPS3	YLR121C	AUS1	Q08409	1394 aa		11.63	□□□□□ -0.55
YPS3	YLR121C	YMR196W	Q04336	1088 aa		11.62	□□□□□ -0.55
YPS3	YLR121C	RTF1	P53064	558 aa		11.61	□□□□□ -0.55
YPS3	YLR121C	ADE6	P38972	1358 aa	Known RBP	11.61	□□□□□ -0.55
YPS3	YLR121C	SUI2	P20459	304 aa	Known RBP	11.6	□□□□□ -0.55
YPS3	YLR121C	RTR1	P40084	226 aa	Predicted RBP	11.6	□□□□□ -0.55
YPS3	YLR121C	RPS24A	P0CX31	135 aa	Known RBP	11.6	□□□□□ -0.55
YPS3	YLR121C	RPS24B	P0CX32	135 aa	Known RBP	11.6	□□□□□ -0.55
YPS3	YLR121C	CSE4	P36012	229 aa		11.6	□□□□□ -0.55
YPS3	YLR121C	PAP2	P53632	584 aa	Known RBP	11.6	□□□□□ -0.55
YPS3	YLR121C	GRX4	P32642	244 aa		11.58	□□□□□ -0.56
YPS3	YLR121C	THI12	P42883	340 aa		11.58	□□□□□ -0.56
YPS3	YLR121C	THI5	P43534	340 aa		11.58	□□□□□ -0.56
YPS3	YLR121C	THI11	P47183	340 aa		11.58	□□□□□ -0.56
YPS3	YLR121C	THI13	Q07748	340 aa		11.58	□□□□□ -0.56
YPS3	YLR121C	PRP43	P53131	767 aa	Known RBP	11.57	□□□□□ -0.56
YPS3	YLR121C	YIL177C	P40434	1758 aa		11.57	□□□□□ -0.56
YPS3	YLR121C	YJL225C	P40889	1758 aa		11.57	□□□□□ -0.56
YPS3	YLR121C	GAS4	Q08271	471 aa		11.56	□□□□□ -0.56
YPS3	YLR121C	SAP155	P43612	1002 aa		11.54	□□□□□ -0.56
YPS3	YLR121C	PRD1	P25375	712 aa		11.53	□□□□□ -0.56
YPS3	YLR121C	RRP5	Q05022	1729 aa	Known RBP	11.53	□□□□□ -0.56
YPS3	YLR121C	DPS1	P04802	557 aa	Known RBP	11.52	□□□□□ -0.57
YPS3	YLR121C	YRB30	P53107	440 aa	Predicted RBP	11.52	□□□□□ -0.57
YPS3	YLR121C	THI22	Q06490	572 aa		11.52	□□□□□ -0.57
YPS3	YLR121C	RPO41	P13433	1351 aa	Known RBP	11.5	□□□□□ -0.57
YPS3	YLR121C	TPD3	P31383	635 aa		11.5	□□□□□ -0.57
YPS3	YLR121C	APC1	P53886	1748 aa		11.49	□□□□□ -0.57
YPS3	YLR121C	YRF1-2	P40105	1681 aa		11.49	□□□□□ -0.57
YPS3	YLR121C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
YPS3	YLR121C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
YPS3	YLR121C	URB1	P34241	1764 aa	Known RBP	11.47	□□□□□ -0.57
YPS3	YLR121C	FKS3	Q04952	1785 aa		11.46	□□□□□ -0.57
YPS3	YLR121C	HEF3	P53978	1044 aa	Known RBP	11.46	□□□□□ -0.57
YPS3	YLR121C	RTT109	Q07794	436 aa		11.45	□□□□□ -0.58
YPS3	YLR121C	AKL1	P38080	1108 aa	Known RBP	11.43	□□□□□ -0.58
YPS3	YLR121C	FPR3	P38911	411 aa	Known RBP	11.43	□□□□□ -0.58
YPS3	YLR121C	MIF2	P35201	549 aa		11.41	□□□□□ -0.58
YPS3	YLR121C	TFA1	P36100	482 aa		11.41	□□□□□ -0.58
YPS3	YLR121C	YRF1-4	O13559	1382 aa		11.41	□□□□□ -0.58
YPS3	YLR121C	RAD2	P07276	1031 aa		11.4	□□□□□ -0.59
YPS3	YLR121C	DAL5	P15365	543 aa		11.39	□□□□□ -0.59
YPS3	YLR121C	PRP5	P21372	849 aa	Predicted RBP	11.39	□□□□□ -0.59
YPS3	YLR121C	YIL092W	P40497	633 aa		11.39	□□□□□ -0.59
YPS3	YLR121C	SIR4	P11978	1358 aa		11.38	□□□□□ -0.59
YPS3	YLR121C	PRP45	P28004	379 aa	Predicted RBP	11.38	□□□□□ -0.59
YPS3	YLR121C	DSD1	P53095	428 aa		11.38	□□□□□ -0.59
YPS3	YLR121C	SLM3	Q12093	417 aa		11.35	□□□□□ -0.59
YPS3	YLR121C	PTP3	P40048	928 aa		11.35	□□□□□ -0.59
YPS3	YLR121C	MSB3	P48566	633 aa	Predicted RBP	11.35	□□□□□ -0.59
YPS3	YLR121C	YNL050C	P53952	270 aa		11.35	□□□□□ -0.59
YPS3	YLR121C	RPC31	P17890	251 aa		11.34	□□□□□ -0.59
YPS3	YLR121C	NTH2	P35172	780 aa		11.34	□□□□□ -0.59
YPS3	YLR121C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.34	□□□□□ -0.59	not detected
YPS3	YLR121C	HSP104	P31539	908 aa	Known RBP	11.33	□□□□□ -0.6
YPS3	YLR121C	MAK21	Q12176	1025 aa	Known RBP	11.33	□□□□□ -0.6
YPS3	YLR121C	RRT14	P40470	206 aa		11.31	□□□□□ -0.6
YPS3	YLR121C	GYP7	P48365	746 aa		11.31	□□□□□ -0.6
YPS3	YLR121C	ZDS1	P50111	915 aa	Known RBP	11.31	□□□□□ -0.6
YPS3	YLR121C	POL32	P47110	350 aa		11.3	□□□□□ -0.6
YPS3	YLR121C	YBR287W	P38355	427 aa		11.28	□□□□□ -0.6
YPS3	YLR121C	MAM1	P40065	302 aa		11.28	□□□□□ -0.6
YPS3	YLR121C	AOS1	Q06624	347 aa		11.28	□□□□□ -0.6
YPS3	YLR121C	TCB1	Q12466	1186 aa		11.28	□□□□□ -0.6
YPS3	YLR121C	XKS1	P42826	600 aa		11.27	□□□□□ -0.61
YPS3	YLR121C	YRF1-3	P0CX14	1859 aa		11.26	□□□□□ -0.61
YPS3	YLR121C	YRF1-7	P0CX15	1859 aa		11.26	□□□□□ -0.61
YPS3	YLR121C	YRF1-6	P53819	1859 aa		11.26	□□□□□ -0.61
YPS3	YLR121C	RCR1	P38212	213 aa		11.25	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms