RNA–Protein interactions for RNA: YLR110C

CCW12, Transcript of Cell wall mannoprotein, yeastyeast

Gene CCW12, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCW12YLR110C SEC3P33332 1336 aaKnown RBP9.58□□□□□ -0.88
CCW12YLR110C PSK1P31374 1356 aa9.58□□□□□ -0.88
CCW12YLR110C CPS1P27614 576 aa9.57□□□□□ -0.88
CCW12YLR110C PPH3P32345 308 aa9.57□□□□□ -0.88
CCW12YLR110C FKH1P40466 484 aa9.54□□□□□ -0.88
CCW12YLR110C SPT7P35177 1332 aa9.54□□□□□ -0.88
CCW12YLR110C MLP1Q02455 1875 aaKnown RBP9.53□□□□□ -0.88
CCW12YLR110C RTG3P38165 486 aa9.52□□□□□ -0.89
CCW12YLR110C YML133CQ03099 1374 aa9.51□□□□□ -0.89
CCW12YLR110C YLL067CQ07888 1374 aa9.51□□□□□ -0.89
CCW12YLR110C YLL066CQ99208 1374 aa9.51□□□□□ -0.89
CCW12YLR110C PSD2P53037 1138 aaKnown RBP9.51□□□□□ -0.89
CCW12YLR110C LEU2P04173 364 aaPredicted RBP9.49□□□□□ -0.89
CCW12YLR110C MTR4P47047 1073 aaKnown RBP9.47□□□□□ -0.89
CCW12YLR110C LEU3P08638 886 aa9.46□□□□□ -0.9
CCW12YLR110C NST1P53935 1240 aa9.46□□□□□ -0.9
CCW12YLR110C ADE6P38972 1358 aaKnown RBP9.46□□□□□ -0.9
CCW12YLR110C PTP3P40048 928 aa9.44□□□□□ -0.9
CCW12YLR110C ENP1P38333 483 aaKnown RBP9.43□□□□□ -0.9
CCW12YLR110C PRP43P53131 767 aaKnown RBP9.43□□□□□ -0.9
CCW12YLR110C CSE4P36012 229 aa9.42□□□□□ -0.9
CCW12YLR110C TY4B-HP0C2J7 1802 aa9.4□□□□□ -0.9
CCW12YLR110C TY4B-JP47024 1803 aa9.4□□□□□ -0.9
CCW12YLR110C RPS24AP0CX31 135 aaKnown RBP9.4□□□□□ -0.9
CCW12YLR110C RPS24BP0CX32 135 aaKnown RBP9.4□□□□□ -0.9
CCW12YLR110C PDI1P17967 522 aaKnown RBP9.4□□□□□ -0.9
CCW12YLR110C RTF1P53064 558 aa9.39□□□□□ -0.91
CCW12YLR110C TAP42Q04372 366 aa9.39□□□□□ -0.91
CCW12YLR110C YEF3P16521 1044 aaKnown RBP9.38□□□□□ -0.91
CCW12YLR110C TRK1P12685 1235 aa9.36□□□□□ -0.91
CCW12YLR110C PRP45P28004 379 aaPredicted RBP9.36□□□□□ -0.91
CCW12YLR110C PRP5P21372 849 aaPredicted RBP9.35□□□□□ -0.91
CCW12YLR110C NSR1P27476 414 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
CCW12YLR110C GRX4P32642 244 aa9.35□□□□□ -0.91
CCW12YLR110C RRP5Q05022 1729 aaKnown RBP9.35□□□□□ -0.91
CCW12YLR110C AUS1Q08409 1394 aa9.35□□□□□ -0.91
CCW12YLR110C KAR2P16474 682 aaKnown RBP9.34□□□□□ -0.91
CCW12YLR110C HIM1Q06674 414 aa9.34□□□□□ -0.91
CCW12YLR110C GAS4Q08271 471 aa9.33□□□□□ -0.92
CCW12YLR110C DPS1P04802 557 aaKnown RBP9.32□□□□□ -0.92
CCW12YLR110C REB1P21538 810 aa9.31□□□□□ -0.92
CCW12YLR110C YAH1Q12184 172 aaKnown RBP9.31□□□□□ -0.92
CCW12YLR110C IOC4Q04213 475 aa9.3□□□□□ -0.92
CCW12YLR110C MSB3P48566 633 aaPredicted RBP9.29□□□□□ -0.92
CCW12YLR110C APP1P53933 587 aa9.29□□□□□ -0.92
CCW12YLR110C SLM3Q12093 417 aa9.29□□□□□ -0.92
CCW12YLR110C ENT1Q12518 454 aa9.29□□□□□ -0.92
CCW12YLR110C YRF1-2P40105 1681 aa9.29□□□□□ -0.92
CCW12YLR110C PAP2P53632 584 aaKnown RBP9.28□□□□□ -0.92
CCW12YLR110C YIL177CP40434 1758 aa9.27□□□□□ -0.92
CCW12YLR110C YJL225CP40889 1758 aa9.27□□□□□ -0.92
CCW12YLR110C RPO41P13433 1351 aaKnown RBP9.26□□□□□ -0.93
CCW12YLR110C TCB1Q12466 1186 aa9.26□□□□□ -0.93
CCW12YLR110C RRP46P53256 223 aaPredicted RBP9.25□□□□□ -0.93
CCW12YLR110C ENV9Q08651 330 aa9.25□□□□□ -0.93
CCW12YLR110C SNF2P22082 1703 aa9.25□□□□□ -0.93
CCW12YLR110C FKS3Q04952 1785 aa9.23□□□□□ -0.93
CCW12YLR110C RTR1P40084 226 aaPredicted RBP9.23□□□□□ -0.93
CCW12YLR110C URB1P34241 1764 aaKnown RBP9.22□□□□□ -0.93
CCW12YLR110C PRS1P32895 427 aaKnown RBP9.22□□□□□ -0.93
CCW12YLR110C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
CCW12YLR110C XKS1P42826 600 aa9.22□□□□□ -0.93
CCW12YLR110C YDL144CQ07589 356 aa9.22□□□□□ -0.93
CCW12YLR110C RSF2P46974 1380 aa9.22□□□□□ -0.93
CCW12YLR110C RPP0P05317 312 aaKnown RBP9.21□□□□□ -0.94
CCW12YLR110C APC1P53886 1748 aa9.19□□□□□ -0.94
CCW12YLR110C AKL1P38080 1108 aaKnown RBP9.19□□□□□ -0.94
CCW12YLR110C MPP10P47083 593 aaKnown RBP9.19□□□□□ -0.94
CCW12YLR110C IMH1Q06704 911 aaKnown RBP9.19□□□□□ -0.94
CCW12YLR110C PRD1P25375 712 aa9.18□□□□□ -0.94
CCW12YLR110C IES2P40154 320 aa9.18□□□□□ -0.94
CCW12YLR110C VPS27P40343 622 aaKnown RBP9.18□□□□□ -0.94
CCW12YLR110C DSD1P53095 428 aa9.18□□□□□ -0.94
CCW12YLR110C YRF1-4O13559 1382 aa9.16□□□□□ -0.94
CCW12YLR110C SIR4P11978 1358 aa9.16□□□□□ -0.94
CCW12YLR110C RCR1P38212 213 aa9.16□□□□□ -0.94
CCW12YLR110C CDC45Q08032 650 aa9.16□□□□□ -0.94
CCW12YLR110C YIL055CP40523 627 aaKnown RBP9.15□□□□□ -0.94
CCW12YLR110C THI22Q06490 572 aa9.15□□□□□ -0.94
CCW12YLR110C HSP104P31539 908 aaKnown RBP9.14□□□□□ -0.95
CCW12YLR110C YRF1-3P0CX14 1859 aa9.14□□□□□ -0.95
CCW12YLR110C YRF1-7P0CX15 1859 aa9.14□□□□□ -0.95
CCW12YLR110C YRF1-6P53819 1859 aa9.14□□□□□ -0.95
CCW12YLR110C SUI2P20459 304 aaKnown RBP9.13□□□□□ -0.95
CCW12YLR110C CTF4Q01454 927 aa9.13□□□□□ -0.95
CCW12YLR110C SAP155P43612 1002 aa9.12□□□□□ -0.95
CCW12YLR110C TPD3P31383 635 aa9.11□□□□□ -0.95
CCW12YLR110C NTH2P35172 780 aa9.11□□□□□ -0.95
CCW12YLR110C YKL133CP36066 463 aa9.11□□□□□ -0.95
CCW12YLR110C MEC3Q02574 474 aa9.11□□□□□ -0.95
CCW12YLR110C AOS1Q06624 347 aa9.11□□□□□ -0.95
CCW12YLR110C RVB2Q12464 471 aaKnown RBP9.11□□□□□ -0.95
CCW12YLR110C ROM2P51862 1356 aaKnown RBP9.11□□□□□ -0.95
CCW12YLR110C YNL050CP53952 270 aa9.1□□□□□ -0.95
CCW12YLR110C RTT109Q07794 436 aa9.1□□□□□ -0.95
CCW12YLR110C HEF3P53978 1044 aaKnown RBP9.09□□□□□ -0.95
CCW12YLR110C INP54Q08227 384 aaKnown RBP9.09□□□□□ -0.95
CCW12YLR110C DOT5P40553 215 aa9.08□□□□□ -0.96
CCW12YLR110C ADE16P54113 591 aaKnown RBP9.08□□□□□ -0.96
CCW12YLR110C YRB30P53107 440 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms