RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W RIM21P48565 533 aa2.25□□□□□ -2.05
SMC4YLR086W PUS6P53294 404 aa2.25□□□□□ -2.05
SMC4YLR086W BIO2P32451 375 aa2.24□□□□□ -2.05
SMC4YLR086W YBL036CP38197 257 aa2.24□□□□□ -2.05
SMC4YLR086W ATG32P40458 529 aa2.24□□□□□ -2.05
SMC4YLR086W APL6P46682 809 aa2.24□□□□□ -2.05
SMC4YLR086W BNI4P53858 892 aa2.24□□□□□ -2.05
SMC4YLR086W RAM1P22007 431 aa2.24□□□□□ -2.05
SMC4YLR086W YML082WQ04533 649 aaKnown RBP2.24□□□□□ -2.05
SMC4YLR086W PEX21P50091 288 aa2.24□□□□□ -2.05
SMC4YLR086W YDL129WQ07555 291 aa2.24□□□□□ -2.05
SMC4YLR086W RPA14P50106 137 aa2.23□□□□□ -2.05
SMC4YLR086W NMA111P53920 997 aa2.23□□□□□ -2.05
SMC4YLR086W YMR196WQ04336 1088 aa2.23□□□□□ -2.05
SMC4YLR086W YPR097WQ06839 1073 aa2.23□□□□□ -2.05
SMC4YLR086W RTG1P32607 177 aa2.23□□□□□ -2.05
SMC4YLR086W SPP1Q03012 353 aa2.23□□□□□ -2.05
SMC4YLR086W AGE1Q04412 482 aa2.23□□□□□ -2.05
SMC4YLR086W FKH1P40466 484 aa2.22□□□□□ -2.05
SMC4YLR086W TUM1Q08686 304 aaKnown RBP2.22□□□□□ -2.05
SMC4YLR086W HAP5Q02516 242 aa2.22□□□□□ -2.05
SMC4YLR086W PML39Q03760 334 aa2.22□□□□□ -2.05
SMC4YLR086W YDR344CQ05510 147 aa2.22□□□□□ -2.05
SMC4YLR086W FRA1Q07825 749 aa2.22□□□□□ -2.05
SMC4YLR086W TYW1Q08960 810 aaKnown RBP2.22□□□□□ -2.05
SMC4YLR086W YBL029C-AQ3E756 94 aa2.22□□□□□ -2.05
SMC4YLR086W RTT106P40161 455 aa2.22□□□□□ -2.05
SMC4YLR086W YJL007CP47080 104 aa2.22□□□□□ -2.05
SMC4YLR086W PKH3Q03306 898 aaPredicted RBP2.22□□□□□ -2.05
SMC4YLR086W NCR1Q12200 1170 aa2.22□□□□□ -2.05
SMC4YLR086W ESS1P22696 170 aa2.22□□□□□ -2.05
SMC4YLR086W ATG3P40344 310 aa2.22□□□□□ -2.05
SMC4YLR086W YPR084WQ06821 456 aa2.22□□□□□ -2.05
SMC4YLR086W YRR1Q12172 810 aa2.22□□□□□ -2.05
SMC4YLR086W ENO2P00925 437 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W RDS2P19541 446 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W YJU3P28321 313 aa2.21□□□□□ -2.06
SMC4YLR086W NUD1P32336 851 aa2.21□□□□□ -2.06
SMC4YLR086W SPT23P35210 1082 aa2.21□□□□□ -2.06
SMC4YLR086W RPL34BP40525 121 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W SAS4Q04003 481 aa2.21□□□□□ -2.06
SMC4YLR086W TRM1P15565 570 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W RTG2P32608 588 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W PUF6Q04373 656 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W NOB1Q08444 459 aaKnown RBP2.21□□□□□ -2.06
SMC4YLR086W LDB19Q12502 818 aa2.21□□□□□ -2.06
SMC4YLR086W PUP1P25043 261 aa2.2□□□□□ -2.06
SMC4YLR086W CDC3P32457 520 aaKnown RBP2.2□□□□□ -2.06
SMC4YLR086W SLX8P40072 274 aa2.2□□□□□ -2.06
SMC4YLR086W MID1P41821 548 aa2.2□□□□□ -2.06
SMC4YLR086W PEX29Q03370 554 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-DR4O74302 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-HP0C2I4 478 aaKnown RBP2.2□□□□□ -2.06
SMC4YLR086W TY1A-AP0CX57 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-PR1P0CX58 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-ORP0CX59 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-PR2P0CX60 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-DR5P0CX65 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-ER2P0CX66 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-GR3P0CX67 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-LR1P0CX68 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-MR2P0CX69 440 aa2.2□□□□□ -2.06
SMC4YLR086W SLY41P22215 453 aa2.2□□□□□ -2.06
SMC4YLR086W SCJ1P25303 377 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-JR2P47099 440 aa2.2□□□□□ -2.06
SMC4YLR086W STR2P47164 639 aa2.2□□□□□ -2.06
SMC4YLR086W YML020WQ03722 664 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-DR1Q03856 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-ML1Q04706 440 aaKnown RBP2.2□□□□□ -2.06
SMC4YLR086W TY1A-BRQ12217 440 aa2.2□□□□□ -2.06
SMC4YLR086W MCM16Q12262 181 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-NL2Q12470 440 aa2.2□□□□□ -2.06
SMC4YLR086W TY1A-GR2Q12485 440 aa2.2□□□□□ -2.06
SMC4YLR086W MOD5P07884 428 aa2.2□□□□□ -2.06
SMC4YLR086W ARG8P18544 423 aa2.2□□□□□ -2.06
SMC4YLR086W TFG1P41895 735 aaPredicted RBP2.2□□□□□ -2.06
SMC4YLR086W ENO1P00924 437 aaKnown RBP2.2□□□□□ -2.06
SMC4YLR086W SEC2P17065 759 aa2.2□□□□□ -2.06
SMC4YLR086W SEN54Q02825 467 aaPredicted RBP2.19□□□□□ -2.06
SMC4YLR086W CWC15Q03772 175 aaKnown RBP2.19□□□□□ -2.06
SMC4YLR086W BUD20Q08004 166 aaPredicted RBP2.19□□□□□ -2.06
SMC4YLR086W AIR2Q12476 344 aaKnown RBP2.19□□□□□ -2.06
SMC4YLR086W UBP1P25037 809 aa2.19□□□□□ -2.06
SMC4YLR086W BUD31P25337 157 aaPredicted RBP2.19□□□□□ -2.06
SMC4YLR086W VAC17P25591 423 aa2.19□□□□□ -2.06
SMC4YLR086W SLD2P34252 453 aa2.19□□□□□ -2.06
SMC4YLR086W TGL4P36165 910 aa2.19□□□□□ -2.06
SMC4YLR086W SSF1P38789 453 aaPredicted RBP2.19□□□□□ -2.06
SMC4YLR086W ISM1P48526 1002 aa2.19□□□□□ -2.06
SMC4YLR086W HEM3P28789 327 aa2.19□□□□□ -2.06
SMC4YLR086W GUT2P32191 649 aa2.19□□□□□ -2.06
SMC4YLR086W NPL4P33755 580 aa2.19□□□□□ -2.06
SMC4YLR086W ALR1Q08269 859 aa2.19□□□□□ -2.06
SMC4YLR086W PHO87P25360 923 aa2.18□□□□□ -2.06
SMC4YLR086W TUB4P53378 473 aa2.18□□□□□ -2.06
SMC4YLR086W YNL108CP53929 270 aa2.18□□□□□ -2.06
SMC4YLR086W GAL2P13181 574 aa2.18□□□□□ -2.06
SMC4YLR086W YDJ1P25491 409 aaKnown RBP2.18□□□□□ -2.06
SMC4YLR086W PRT1P06103 763 aaKnown RBP2.18□□□□□ -2.06
SMC4YLR086W PDC1P06169 563 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms